RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, human

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-225	ENST00000545920	BTBD2	Q9BX70	525 aa		6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	CDCA4	Q9BXL8	241 aa		6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	ACPT	Q9BZG2	426 aa		6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	OR2B2	Q9GZK3	357 aa		6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	KLHL25	Q9H0H3	589 aa		6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	RIBC2	Q9H4K1	309 aa		6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	SARS2	Q9NP81	518 aa	Known RBP	6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	PCDH12	Q9NPG4	1184 aa		6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	THSD1	Q9NS62	852 aa		6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	DNAJC11	Q9NVH1	559 aa		6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	FLRT1	Q9NZU1	646 aa		6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	PDP1	Q9P0J1	537 aa	Predicted RBP	6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	ERVK-18	Q9QC07	812 aa		6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	DNMT3B	Q9UBC3	853 aa	Known RBP	6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	CACNG4	Q9UBN1	327 aa		6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	SPAST	Q9UBP0	616 aa		6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	LHX3	Q9UBR4	397 aa		6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	ZNF282	Q9UDV7	671 aa	Predicted RBP	6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	SEC14L4	Q9UDX3	406 aa		6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	KLHL3	Q9UH77	587 aa		6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	CRLS1	Q9UJA2	301 aa		6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	ZNF229	Q9UJW7	825 aa		6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	USP22	Q9UPT9	525 aa		6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	RNF6	Q9Y252	685 aa		6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	WBP11	Q9Y2W2	641 aa	Known RBP	6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	PPIL1	Q9Y3C6	166 aa		6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	BACE2	Q9Y5Z0	518 aa		6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920		V9GYQ6	96 aa		6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	POLR2A	P24928	1970 aa	Known RBP	6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	DOCK4	Q8N1I0	1966 aa		6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	MYLK	Q15746	1914 aa		6.25	□□□□□ -1.41
SNHG1-225	ENST00000545920	ELOA3C	A0A087WX78	387 aa	Predicted RBP	6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920		A0A0D9SEW6	157 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	GLYATL1P3	A0A0U1RQE8	302 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	KRTAP9-6	A0A140TA67	174 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	ELOA3D	A6NLF2	546 aa	Predicted RBP	6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	LOC730098	B7Z3J9	87 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	SHISA8	B8ZZ34	492 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	FPGT	O14772	594 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	SUV39H1	O43463	412 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	XPNPEP2	O43895	674 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	FOXD2	O60548	495 aa	Predicted RBP	6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	HTR3B	O95264	441 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	KCNK5	O95279	499 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	TRBC1	P01850	177 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	ITGB1	P05556	798 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	AMD1	P17707	334 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	PFKL	P17858	780 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	CD72	P21854	359 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	SLC6A4	P31645	630 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	TGFBR2	P37173	567 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	RPS5	P46782	204 aa	Known RBP	6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	RGR	P47804	291 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	OR1G1	P47890	313 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	MASP1	P48740	699 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	LIMK1	P53667	647 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	IST1	P53990	364 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	RHOA	P61586	193 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	RPP38	P78345	283 aa	Known RBP	6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	BNC1	Q01954	994 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	BCL2L1	Q07817	233 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	FCHO2	Q0JRZ9	810 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	GTF2H3	Q13889	308 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	IRF3	Q14653	427 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	TIGD6	Q17RP2	521 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	ELOA3B	Q3SY89	546 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	PAN2	Q504Q3	1202 aa	Known RBP	6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	SPIN4	Q56A73	249 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	HABP4	Q5JVS0	413 aa	Known RBP	6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	SPANXN2	Q5MJ10	180 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	TPRG1L	Q5T0D9	272 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	MEDAG	Q5VYS4	303 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	RNF219	Q5W0B1	726 aa	Predicted RBP	6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	CXorf57	Q6NSI4	855 aa	Known RBP	6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	ZNF544	Q6NX49	715 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	ZCCHC8	Q6NZY4	707 aa	Known RBP	6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	DOK6	Q6PKX4	331 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	SUSD1	Q6UWL2	747 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	C17orf99	Q6UX52	265 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	DLK2	Q6UY11	383 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	TMEM179B	Q7Z7N9	219 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	ZNF605	Q86T29	641 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	SLC22A16	Q86VW1	577 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	RASGRP3	Q8IV61	690 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	MMAA	Q8IVH4	418 aa	Known RBP	6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	SLC44A2	Q8IWA5	706 aa	Predicted RBP	6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	ABI1	Q8IZP0	508 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	DNAJC22	Q8N4W6	341 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	ZNF557	Q8N988	423 aa	Predicted RBP	6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	KLHDC9	Q8NEP7	349 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	TRPV1	Q8NER1	839 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	ELOA3	Q8NG57	546 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	GOT1L1	Q8NHS2	421 aa	Predicted RBP	6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	NDNF	Q8TB73	568 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	CNIH3	Q8TBE1	160 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	FRS2	Q8WU20	508 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	PIH1D2	Q8WWB5	315 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	TP53INP1	Q96A56	240 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	TIFA	Q96CG3	184 aa		6.24	□□□□□ -1.41
SNHG1-225	ENST00000545920	REPS1	Q96D71	796 aa		6.24	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 44 ms