RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 OR52E1Q8NGJ3 308 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 ARRDC2Q8TBH0 407 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 STT3BQ8TCJ2 826 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 HM13Q8TCT9 377 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 FAM222BQ8WU58 562 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 MAML1Q92585 1016 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 JADE3Q92613 823 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 FATE1Q969F0 183 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 C8orf44Q96CB5 159 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 EID2BQ96D98 161 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 LINC00615Q96LM1 132 aaPredicted RBP3.86□□□□□ -1.79
SNHG1-220ENST00000544550 CSPG4P5Q96PW8 444 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 OLFM1Q99784 485 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 TACO1Q9BSH4 297 aaKnown RBP3.86□□□□□ -1.79
SNHG1-220ENST00000544550 TUBB6Q9BUF5 446 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 QRSL1Q9H0R6 528 aaKnown RBP3.86□□□□□ -1.79
SNHG1-220ENST00000544550 GOLPH3LQ9H4A5 285 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 CLSTN2Q9H4D0 955 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 MVB12BQ9H7P6 319 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 VPS37BQ9H9H4 285 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 ZNF304Q9HCX3 659 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 FAM60AQ9NP50 221 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 DMRT3Q9NQL9 472 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 CUTCQ9NTM9 273 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 C14orf105Q9NVL8 296 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 RBM22Q9NW64 420 aaKnown RBP eCLIP3.86□□□□□ -1.794e-10■■■■□ 19.9
SNHG1-220ENST00000544550 EURLQ9NYK6 297 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 CWC15Q9P013 229 aaKnown RBP3.86□□□□□ -1.79
SNHG1-220ENST00000544550 B4GALT7Q9UBV7 327 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 CTSFQ9UBX1 484 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 TRPS1Q9UHF7 1281 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 PCSK1NQ9UHG2 260 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 IP6K2Q9UHH9 426 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 PRSS50Q9UI38 385 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 ZFP69BQ9UJL9 534 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 ZNF180Q9UJW8 692 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 SHOC2Q9UQ13 582 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 ZNF711Q9Y462 761 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 ATP6V1DQ9Y5K8 247 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 GPR45Q9Y5Y3 372 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 MRFAP1Q9Y605 127 aa3.86□□□□□ -1.79
SNHG1-220ENST00000544550 IGLV3-12A0A075B6K2 115 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 A0A1B0GTH9 108 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 TCRBV5S1A1TA0A578 114 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 GOLGA6L4A6NEF3 574 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 TFECO14948 347 aaPredicted RBP3.85□□□□□ -1.79
SNHG1-220ENST00000544550 WISP2O76076 250 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 KNG1P01042 644 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 HEXBP07686 556 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 HSP90AA1P07900 732 aaKnown RBP3.85□□□□□ -1.79
SNHG1-220ENST00000544550 SP1P08047 785 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 CYC1P08574 325 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 ITGAMP11215 1152 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 RALBP11234 206 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 UCHL3P15374 230 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 UGT2B7P16662 529 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 CCNCP24863 283 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 HMGCLP35914 325 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 TNNT3P45378 269 aaPredicted RBP3.85□□□□□ -1.79
SNHG1-220ENST00000544550 OR1D4P47884 311 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 RPL7AP62424 266 aaKnown RBP3.85□□□□□ -1.79
SNHG1-220ENST00000544550 HSF1Q00613 529 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 CD83Q01151 205 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 EEF1A2Q05639 463 aaKnown RBP3.85□□□□□ -1.79
SNHG1-220ENST00000544550 PMPCAQ10713 525 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 TUBA3CQ13748 450 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 BECN1Q14457 450 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 KIR2DS3Q14952 304 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 DAZAP2Q15038 168 aaPredicted RBP3.85□□□□□ -1.79
SNHG1-220ENST00000544550 ZIC1Q15915 447 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 CAMK4Q16566 473 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 MAN2A1Q16706 1144 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 MUM1Q2TAK8 710 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 BCL7AQ4VC05 210 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 BOLA3Q53S33 107 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 Q5PR19 223 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 ACER2Q5QJU3 275 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 PRR31Q5SQ13 230 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 FNBP1LQ5T0N5 605 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 CCDC122Q5T0U0 273 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 FKBP15Q5T1M5 1219 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 GPRC6AQ5T6X5 926 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 ACAD10Q6JQN1 1059 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 SLC25A25Q6KCM7 469 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 ARHGAP11AQ6P4F7 1023 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 TUBA3EQ6PEY2 450 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 MON1BQ7L1V2 547 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 GALNTL5Q7Z4T8 443 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 POLNQ7Z5Q5 900 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 CCDC71Q8IV32 467 aaPredicted RBP3.85□□□□□ -1.79
SNHG1-220ENST00000544550 TMEM151BQ8IW70 566 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 CHERPQ8IWX8 916 aaKnown RBP3.85□□□□□ -1.79
SNHG1-220ENST00000544550 CFAP206Q8IYR0 622 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 BEST3Q8N1M1 668 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 MYO1HQ8N1T3 1032 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 MARVELD2Q8N4S9 558 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.85□□□□□ -1.792e-11■■■■■ 59.4
SNHG1-220ENST00000544550 STPG3Q8N7X2 389 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 MDS2Q8NDY4 140 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 OR5M3Q8NGP4 307 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms