RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 ANGPTL1O95841 491 aa15.18■□□□□ 0.02
SNRNP70-203ENST00000544278 CLK3P49761 638 aaKnown RBP15.18■□□□□ 0.02
SNRNP70-203ENST00000544278 TAS2R50P59544 299 aa15.18■□□□□ 0.02
SNRNP70-203ENST00000544278 ISL1P61371 349 aa15.18■□□□□ 0.02
SNRNP70-203ENST00000544278 ABHD18Q0P651 414 aa15.18■□□□□ 0.02
SNRNP70-203ENST00000544278 PLEKHS1Q5SXH7 462 aa15.18■□□□□ 0.02
SNRNP70-203ENST00000544278 OR2T5Q6IEZ7 315 aa15.18■□□□□ 0.02
SNRNP70-203ENST00000544278 ZNF773Q6PK81 442 aa15.18■□□□□ 0.02
SNRNP70-203ENST00000544278 AHSA2Q719I0 299 aa15.18■□□□□ 0.02
SNRNP70-203ENST00000544278 ZCCHC7Q8N3Z6 543 aaKnown RBP15.18■□□□□ 0.02
SNRNP70-203ENST00000544278 OR2T29Q8NH02 315 aa15.18■□□□□ 0.02
SNRNP70-203ENST00000544278 SH3GL1Q99961 368 aa15.18■□□□□ 0.02
SNRNP70-203ENST00000544278 ALOXE3Q9BYJ1 711 aa15.18■□□□□ 0.02
SNRNP70-203ENST00000544278 ROGDIQ9GZN7 287 aa15.18■□□□□ 0.02
SNRNP70-203ENST00000544278 OSGEPL1Q9H4B0 414 aa15.18■□□□□ 0.02
SNRNP70-203ENST00000544278 XKR8Q9H6D3 395 aa15.18■□□□□ 0.02
SNRNP70-203ENST00000544278 NPC1O15118 1278 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 PCCBP05166 539 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 C2orf80Q0P641 193 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 SYT16Q17RD7 645 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 ATG9BQ674R7 924 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 ADCK2Q7Z695 626 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 ZNF547Q8IVP9 402 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 OR5K1Q8NHB7 308 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 SPPL3Q8TCT6 385 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 RBM4BQ9BQ04 359 aaKnown RBP15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 RBM4Q9BWF3 364 aaKnown RBP15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 FUNDC2Q9BWH2 189 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 CTPS2Q9NRF8 586 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.17■□□□□ 0.021e-10■■□□□ 12.8
SNRNP70-203ENST00000544278 KLHL20Q9Y2M5 609 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 SPTBP11277 2137 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 PRKRAO75569 313 aaKnown RBP15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 GSTM1P09488 218 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 ADH5P11766 374 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 C6P13671 934 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 ZNF8P17098 575 aaPredicted RBP15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 CDH3P22223 829 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 RRM2P31350 389 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 MMP12P39900 470 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 SOX9P48436 509 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 IDH2P48735 452 aaKnown RBP15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 MRPL19P49406 292 aaKnown RBP15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 BCAP31P51572 246 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 ILF2Q12905 390 aaKnown RBP15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 RPS26P11Q5JNZ5 115 aaPredicted RBP15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 PERM1Q5SV97 790 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 LRIF1Q5T3J3 769 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 TMEM236Q5W0B7 351 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 TNFAIP8L2Q6P589 184 aaPredicted RBP15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 BORAQ6PGQ7 559 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 COMMD6Q7Z4G1 85 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 NEURL2Q9BR09 285 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 CCM2Q9BSQ5 444 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 OR1A2Q9Y585 309 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 GMPPBQ9Y5P6 360 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 TBC1D3BA6NDS4 549 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 GLOD5A6NK44 160 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 FAM220BPB1ANY3 271 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 CBFA2T3O75081 653 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 SLCO2B1O94956 709 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 SOD1P00441 154 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 FGBP02675 491 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 PRPS1L1P21108 318 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 PTNP21246 168 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 NRIP1P48552 1158 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 VBP1P61758 197 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 TECPR1Q7Z6L1 1165 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 MEX3DQ86XN8 651 aaKnown RBP15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 NFKBIDQ8NI38 313 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 RAB8BQ92930 207 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 PLEKHA8Q96JA3 519 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 CCDC115Q96NT0 180 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 SLC6A17Q9H1V8 727 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 C11orf49Q9H6J7 331 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 GPATCH2Q9NW75 528 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 CUEDC1Q9NWM3 386 aaPredicted RBP15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 KCNE2Q9Y6J6 123 aa15.17■□□□□ 0.02
SNRNP70-203ENST00000544278 LCKP06239 509 aa15.16■□□□□ 0.02
SNRNP70-203ENST00000544278 NPPBP16860 134 aa15.16■□□□□ 0.02
SNRNP70-203ENST00000544278 HOXD11P31277 338 aaPredicted RBP15.16■□□□□ 0.02
SNRNP70-203ENST00000544278 HNMTP50135 292 aa15.16■□□□□ 0.02
SNRNP70-203ENST00000544278 NFATC3Q12968 1075 aa15.16■□□□□ 0.02
SNRNP70-203ENST00000544278 CDK5R2Q13319 367 aa15.16■□□□□ 0.02
SNRNP70-203ENST00000544278 SOWAHCQ53LP3 525 aaPredicted RBP15.16■□□□□ 0.02
SNRNP70-203ENST00000544278 TTC23Q5W5X9 447 aa15.16■□□□□ 0.02
SNRNP70-203ENST00000544278 DCDC5Q6ZRR9 648 aa15.16■□□□□ 0.02
SNRNP70-203ENST00000544278 CCDC71Q8IV32 467 aaPredicted RBP15.16■□□□□ 0.02
SNRNP70-203ENST00000544278 TTC29Q8NA56 475 aaPredicted RBP15.16■□□□□ 0.02
SNRNP70-203ENST00000544278 DOK4Q8TEW6 326 aa15.16■□□□□ 0.02
SNRNP70-203ENST00000544278 THUMPD1Q9NXG2 353 aaKnown RBP15.16■□□□□ 0.02
SNRNP70-203ENST00000544278 C3orf18Q9UK00 162 aa15.16■□□□□ 0.02
SNRNP70-203ENST00000544278 ORC6Q9Y5N6 252 aa15.16■□□□□ 0.02
SNRNP70-203ENST00000544278 DENND4CQ5VZ89 1909 aa15.16■□□□□ 0.02
SNRNP70-203ENST00000544278 NOL3O60936 208 aaKnown RBP15.16■□□□□ 0.02
SNRNP70-203ENST00000544278 FABP3P05413 133 aa15.16■□□□□ 0.02
SNRNP70-203ENST00000544278 GBX1Q14549 363 aa15.16■□□□□ 0.02
SNRNP70-203ENST00000544278 THOC7Q6I9Y2 204 aaKnown RBP15.16■□□□□ 0.02
SNRNP70-203ENST00000544278 GET4Q7L5D6 327 aaPredicted RBP15.16■□□□□ 0.02
SNRNP70-203ENST00000544278 B3GNT8Q7Z7M8 397 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms