RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 CSTF1Q05048 431 aaKnown RBP6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 DLG1Q12959 904 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 MED22Q15528 200 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 SLC22A15Q8IZD6 547 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 WDTC1Q8N5D0 677 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 GSTCDQ8NEC7 633 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 SNX33Q8WV41 574 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 TRNT1Q96Q11 434 aaKnown RBP6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 SLC35A5Q9BS91 424 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 ARL8BQ9NVJ2 186 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 SPATA2Q9UM82 520 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 DHRS7Q9Y394 339 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 SPIN1Q9Y657 262 aaPredicted RBP6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 NWD2Q9ULI1 1742 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 PSMD9O00233 223 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 PCDHGA12O60330 932 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 TPST2O60704 377 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 ASGR2P07307 311 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 F7P08709 466 aaPredicted RBP6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 GLDCP23378 1020 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 IGFBP5P24593 272 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 S100GP29377 79 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 HMGCLP35914 325 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 TNFRSF4P43489 277 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 RPS13P62277 151 aaKnown RBP6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 ZNF234Q14588 700 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 GOLGA7Q7Z5G4 137 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 AMIGO1Q86WK6 493 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 SLC34A3Q8N130 599 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 LPGAT1Q92604 370 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 NMD3Q96D46 503 aaKnown RBP6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 HIST1H2AAQ96QV6 131 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 DCUN1D5Q9BTE7 237 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 SLC46A2Q9BY10 475 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 DEFB126Q9BYW3 111 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 CTPS2Q9NRF8 586 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 PRTFDC1Q9NRG1 225 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 OR1A2Q9Y585 309 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 TEX264Q9Y6I9 313 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 GLI3P10071 1580 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 ZNF860A6NHJ4 632 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 CXorf49A8MYA2 514 aaPredicted RBP6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 MATN2O00339 956 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 BTN3A3O00478 584 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 TRIM3O75382 744 aaPredicted RBP6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 CYB5AP00167 134 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 TTKP33981 857 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 STAT5AP42229 794 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 DPP6P42658 865 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 OMPP47874 163 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 RPS6KA3P51812 740 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 DSTNP60981 165 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 ABATP80404 500 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 ZNF267Q14586 743 aaPredicted RBP6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 HNRNPA1L2Q32P51 320 aaKnown RBP6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 PM20D1Q6GTS8 502 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 BORAQ6PGQ7 559 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 B3GNT9Q6UX72 402 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 TAS1R1Q7RTX1 841 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 AMER2Q8N7J2 671 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 ZNF566Q969W8 418 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 FCRL4Q96PJ5 515 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 ACTL8Q9H568 366 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 HEBP1Q9NRV9 189 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 LYARQ9NX58 379 aaKnown RBP6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 TESMINQ9Y4I5 508 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 HIDE1A8MVS5 230 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 PRAMEF26H0Y7S4 382 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 CXCR6O00574 342 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 TP53I11O14683 189 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 KRT36O76013 467 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 ACRV1P26436 265 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 KCNJ2P63252 427 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 GSTM4Q03013 218 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 MTX3Q5HYI7 312 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 C1orf220Q5T0J3 134 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 DDI2Q5TDH0 399 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 ZDHHC24Q6UX98 284 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 ASPGQ86U10 573 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 IQCHQ86VS3 1027 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 GLIS1Q8NBF1 620 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 CHST14Q8NCH0 376 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 C2CD4AQ8NCU7 369 aaPredicted RBP6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 OR56A1Q8NGH5 318 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 OR5AK3PQ8NH89 298 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 NKD1Q969G9 470 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 TCEAL4Q96EI5 215 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 MRGPRX2Q96LB1 330 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 EPYCQ99645 322 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 C1orf21Q9H246 121 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 A0A1W2PRV1 198 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 ENO4A6NNW6 628 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 RFXAPO00287 272 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 MANBAO00462 879 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 KPNA4O00629 521 aaPredicted RBP6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 KCNJ13O60928 360 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 CCNB2O95067 398 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 APOL3O95236 402 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 GADD45GO95257 159 aa6.67□□□□□ -1.34
SRGAP1-206ENST00000543397 PRAMEF12O95522 483 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms