RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 ATXN7L1Q9ULK2 861 aaPredicted RBP26.6■■□□□ 1.85
CCM2-218ENST00000541586 TMED5Q9Y3A6 229 aa26.6■■□□□ 1.85
CCM2-218ENST00000541586 TSC22D4Q9Y3Q8 395 aa26.6■■□□□ 1.85
CCM2-218ENST00000541586 BTN3A3O00478 584 aa26.59■■□□□ 1.85
CCM2-218ENST00000541586 FBP2O00757 339 aa26.59■■□□□ 1.85
CCM2-218ENST00000541586 ANKRD28O15084 1053 aa26.59■■□□□ 1.85
CCM2-218ENST00000541586 BCKDHAP12694 445 aa26.59■■□□□ 1.85
CCM2-218ENST00000541586 POLR2CP19387 275 aaPredicted RBP26.59■■□□□ 1.85
CCM2-218ENST00000541586 CXCR2P25025 360 aa26.59■■□□□ 1.85
CCM2-218ENST00000541586 ZFP36L2P47974 494 aaKnown RBP26.59■■□□□ 1.85
CCM2-218ENST00000541586 REEP5Q00765 189 aa26.59■■□□□ 1.85
CCM2-218ENST00000541586 FAM20CQ8IXL6 584 aa26.59■■□□□ 1.85
CCM2-218ENST00000541586 PARP9Q8IXQ6 854 aa26.59■■□□□ 1.85
CCM2-218ENST00000541586 MCUR1Q96AQ8 359 aa26.59■■□□□ 1.85
CCM2-218ENST00000541586 MRPS30Q9NP92 439 aaKnown RBP26.59■■□□□ 1.85
CCM2-218ENST00000541586 DMRT3Q9NQL9 472 aa26.59■■□□□ 1.85
CCM2-218ENST00000541586 TMEM45AQ9NWC5 275 aa26.59■■□□□ 1.85
CCM2-218ENST00000541586 TOR4AQ9NXH8 423 aa26.59■■□□□ 1.85
CCM2-218ENST00000541586 DLGAP4Q9Y2H0 992 aa26.59■■□□□ 1.85
CCM2-218ENST00000541586 UNC13CQ8NB66 2214 aa26.59■■□□□ 1.85
CCM2-218ENST00000541586 SH3BGRLO75368 114 aa26.59■■□□□ 1.85
CCM2-218ENST00000541586 RFPL3O75679 317 aa26.59■■□□□ 1.85
CCM2-218ENST00000541586 GP1BAP07359 652 aa26.59■■□□□ 1.85
CCM2-218ENST00000541586 SDHBP21912 280 aa26.59■■□□□ 1.85
CCM2-218ENST00000541586 CD1CP29017 333 aa26.59■■□□□ 1.85
CCM2-218ENST00000541586 IL12AP29459 219 aa26.59■■□□□ 1.85
CCM2-218ENST00000541586 PIK3CBP42338 1070 aa26.59■■□□□ 1.85
CCM2-218ENST00000541586 EPHA4P54764 986 aa26.59■■□□□ 1.85
CCM2-218ENST00000541586 CSNK1G2P78368 415 aa26.59■■□□□ 1.85
CCM2-218ENST00000541586 ABATP80404 500 aa26.59■■□□□ 1.85
CCM2-218ENST00000541586 PTGR1Q14914 329 aa26.59■■□□□ 1.85
CCM2-218ENST00000541586 RBBP5Q15291 538 aaKnown RBP26.59■■□□□ 1.85
CCM2-218ENST00000541586 GLRX5Q86SX6 157 aa26.59■■□□□ 1.85
CCM2-218ENST00000541586 SLCO6A1Q86UG4 719 aa26.59■■□□□ 1.85
CCM2-218ENST00000541586 OR2L3Q8NG85 312 aa26.59■■□□□ 1.85
CCM2-218ENST00000541586 MRPL1Q9BYD6 325 aaKnown RBP26.59■■□□□ 1.85
CCM2-218ENST00000541586 A0A1W2PQM1 296 aa26.58■■□□□ 1.85
CCM2-218ENST00000541586 ISM1B1AKI9 464 aa26.58■■□□□ 1.85
CCM2-218ENST00000541586 NRP2O60462 931 aa26.58■■□□□ 1.85
CCM2-218ENST00000541586 CAPN3P20807 821 aa26.58■■□□□ 1.85
CCM2-218ENST00000541586 GPLD1P80108 840 aa26.58■■□□□ 1.85
CCM2-218ENST00000541586 RCAN2Q14206 197 aa26.58■■□□□ 1.85
CCM2-218ENST00000541586 SF1Q15637 639 aaKnown RBP26.58■■□□□ 1.85
CCM2-218ENST00000541586 MMEL1Q495T6 779 aa26.58■■□□□ 1.85
CCM2-218ENST00000541586 VPS26BQ4G0F5 336 aa26.58■■□□□ 1.85
CCM2-218ENST00000541586 REP15Q6BDI9 236 aa26.58■■□□□ 1.85
CCM2-218ENST00000541586 VN1R5Q7Z5H4 357 aa26.58■■□□□ 1.85
CCM2-218ENST00000541586 PITHD1Q9GZP4 211 aaPredicted RBP26.58■■□□□ 1.85
CCM2-218ENST00000541586 SLC6A20Q9NP91 592 aa26.58■■□□□ 1.85
CCM2-218ENST00000541586 SLC52A3Q9NQ40 469 aa26.58■■□□□ 1.85
CCM2-218ENST00000541586 BAIAP2L1Q9UHR4 511 aa26.58■■□□□ 1.85
CCM2-218ENST00000541586 PIEZO1Q92508 2521 aa26.57■■□□□ 1.84
CCM2-218ENST00000541586 FEZF1A0PJY2 475 aa26.57■■□□□ 1.84
CCM2-218ENST00000541586 GSAPA4D1B5 854 aa26.57■■□□□ 1.84
CCM2-218ENST00000541586 DUX1O43812 170 aa26.57■■□□□ 1.84
CCM2-218ENST00000541586 KCNK5O95279 499 aa26.57■■□□□ 1.84
CCM2-218ENST00000541586 ACPPP15309 386 aa26.57■■□□□ 1.84
CCM2-218ENST00000541586 JAK1P23458 1154 aa26.57■■□□□ 1.84
CCM2-218ENST00000541586 PGM1P36871 562 aa26.57■■□□□ 1.84
CCM2-218ENST00000541586 ARMC6Q6NXE6 501 aa26.57■■□□□ 1.84
CCM2-218ENST00000541586 KLHL35Q6PF15 583 aa26.57■■□□□ 1.84
CCM2-218ENST00000541586 ADCK2Q7Z695 626 aa26.57■■□□□ 1.84
CCM2-218ENST00000541586 OOSP2Q86WS3 158 aa26.57■■□□□ 1.84
CCM2-218ENST00000541586 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP26.57■■□□□ 1.84
CCM2-218ENST00000541586 DSELQ8IZU8 1212 aa26.57■■□□□ 1.84
CCM2-218ENST00000541586 METTL2AQ96IZ6 378 aaKnown RBP26.57■■□□□ 1.84
CCM2-218ENST00000541586 FCRL1Q96LA6 429 aa26.57■■□□□ 1.84
CCM2-218ENST00000541586 TWSG1Q9GZX9 223 aa26.57■■□□□ 1.84
CCM2-218ENST00000541586 RHBGQ9H310 441 aa26.57■■□□□ 1.84
CCM2-218ENST00000541586 NT5DC2Q9H857 520 aa26.57■■□□□ 1.84
CCM2-218ENST00000541586 FAM234BA2RU67 622 aa26.56■■□□□ 1.84
CCM2-218ENST00000541586 CCNDBP1O95273 360 aa26.56■■□□□ 1.84
CCM2-218ENST00000541586 MAPK1P28482 360 aa26.56■■□□□ 1.84
CCM2-218ENST00000541586 POLR2JP52435 117 aaKnown RBP26.56■■□□□ 1.84
CCM2-218ENST00000541586 KCNK10P57789 538 aa26.56■■□□□ 1.84
CCM2-218ENST00000541586 PHEXP78562 749 aa26.56■■□□□ 1.84
CCM2-218ENST00000541586 TBL3Q12788 808 aaKnown RBP26.56■■□□□ 1.84
CCM2-218ENST00000541586 ART3Q13508 389 aa26.56■■□□□ 1.84
CCM2-218ENST00000541586 NOXRED1Q6NXP6 359 aa26.56■■□□□ 1.84
CCM2-218ENST00000541586 IRGCQ6NXR0 463 aa26.56■■□□□ 1.84
CCM2-218ENST00000541586 DEFB107AQ8IZN7 70 aa26.56■■□□□ 1.84
CCM2-218ENST00000541586 ANKRD53Q8N9V6 530 aa26.56■■□□□ 1.84
CCM2-218ENST00000541586 TSPEARQ8WU66 669 aa26.56■■□□□ 1.84
CCM2-218ENST00000541586 SPDL1Q96EA4 605 aa26.56■■□□□ 1.84
CCM2-218ENST00000541586 KLHL3Q9UH77 587 aa26.56■■□□□ 1.84
CCM2-218ENST00000541586 OR5K3A6NET4 321 aa26.56■■□□□ 1.84
CCM2-218ENST00000541586 BBIP1A8MTZ0 92 aa26.56■■□□□ 1.84
CCM2-218ENST00000541586 TGFB1P01137 390 aa26.56■■□□□ 1.84
CCM2-218ENST00000541586 FTH1P19P0C7X4 201 aa26.56■■□□□ 1.84
CCM2-218ENST00000541586 PRPS2P11908 318 aa26.56■■□□□ 1.84
CCM2-218ENST00000541586 CMPK1P30085 196 aa26.56■■□□□ 1.84
CCM2-218ENST00000541586 ACSM2AQ08AH3 577 aa26.56■■□□□ 1.84
CCM2-218ENST00000541586 ACSM2BQ68CK6 577 aa26.56■■□□□ 1.84
CCM2-218ENST00000541586 DHRS13Q6UX07 377 aa26.56■■□□□ 1.84
CCM2-218ENST00000541586 CHTF18Q8WVB6 975 aa26.56■■□□□ 1.84
CCM2-218ENST00000541586 SLC22A18Q96BI1 424 aa26.56■■□□□ 1.84
CCM2-218ENST00000541586 C11orf24Q96F05 449 aaPredicted RBP26.56■■□□□ 1.84
CCM2-218ENST00000541586 GFM1Q96RP9 751 aaKnown RBP26.56■■□□□ 1.84
CCM2-218ENST00000541586 NUDT22Q9BRQ3 303 aa26.56■■□□□ 1.84
CCM2-218ENST00000541586 THTPAQ9BU02 230 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms