RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 CDADC1Q9BWV3 514 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 ITPAQ9BY32 194 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 BRD9Q9H8M2 597 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 SCN3BQ9NY72 215 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 PNMA8BQ9ULN7 279 aaPredicted RBP9.18□□□□□ -0.94
CNOT4-212ENST00000541284 SH2B3Q9UQQ2 575 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 EFCAB9A8MZ26 197 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 HOXA2O43364 376 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 KCNK2O95069 426 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 CDK1P06493 297 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 SPNP16150 400 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 ZNF8P17098 575 aaPredicted RBP9.18□□□□□ -0.94
CNOT4-212ENST00000541284 ALDH7A1P49419 539 aaKnown RBP9.18□□□□□ -0.94
CNOT4-212ENST00000541284 IL1RL1Q01638 556 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 BCL2A1Q16548 175 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 SYT16Q17RD7 645 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.18□□□□□ -0.94
CNOT4-212ENST00000541284 GPR153Q6NV75 609 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 ZNF605Q86T29 641 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 THOC6Q86W42 341 aaKnown RBP9.18□□□□□ -0.94
CNOT4-212ENST00000541284 SLC5A8Q8N695 610 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 AUTS2Q8WXX7 1259 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 SCAMP4Q969E2 229 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 FEVQ99581 238 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 DUSP26Q9BV47 211 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 REEP1Q9H902 201 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 STOX2Q9P2F5 926 aaPredicted RBP9.18□□□□□ -0.94
CNOT4-212ENST00000541284 ABT1Q9ULW3 272 aaKnown RBP9.18□□□□□ -0.94
CNOT4-212ENST00000541284 CPSF4O95639 269 aaKnown RBP9.18□□□□□ -0.94
CNOT4-212ENST00000541284 SLC7A9P82251 487 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 LILRA6Q6PI73 481 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 SLC22A16Q86VW1 577 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 NLRP8Q86W28 1048 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 HORMAD1Q86X24 394 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 ATG16L2Q8NAA4 619 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 DOHHQ9BU89 302 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 DCSTAMPQ9H295 470 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 RAD18Q9NS91 495 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 RUVBL1Q9Y265 456 aaKnown RBP9.18□□□□□ -0.94
CNOT4-212ENST00000541284 TRIM17Q9Y577 477 aa9.18□□□□□ -0.94
CNOT4-212ENST00000541284 CFAP20Q9Y6A4 193 aaKnown RBP9.18□□□□□ -0.94
CNOT4-212ENST00000541284 A0A1W2PQ67 120 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 FKTNO75072 461 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 UPK1BO75841 260 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 IMPA1P29218 277 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 PAGE2Q7Z2X7 111 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 HS6ST3Q8IZP7 471 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 C1orf52Q8N6N3 182 aaKnown RBP9.17□□□□□ -0.94
CNOT4-212ENST00000541284 OR56A3Q8NH54 315 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 MYLIPQ8WY64 445 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 BRF2Q9HAW0 419 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 TMEM165Q9HC07 324 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 ATAD3AQ9NVI7 634 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 CFAP97Q9P2B7 532 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 ANKMY1Q9P2S6 941 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 FAM32AQ9Y421 112 aaKnown RBP9.17□□□□□ -0.94
CNOT4-212ENST00000541284 C5orf42Q9H799 3197 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 LRP4O75096 1905 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 TRIM43BA6NCK2 446 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 PTHP01270 115 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 ALOX5P09917 674 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 ADORA3P0DMS8 318 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 AQP1P29972 269 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 OPRD1P41143 372 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 SELENOWP63302 87 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 ZNF362Q5T0B9 420 aaPredicted RBP9.17□□□□□ -0.94
CNOT4-212ENST00000541284 USP45Q70EL2 814 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 KIAA0907Q7Z7F0 614 aaPredicted RBP9.17□□□□□ -0.94
CNOT4-212ENST00000541284 NPAS3Q8IXF0 933 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 CMTM8Q8IZV2 173 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 FAM83FQ8NEG4 500 aaPredicted RBP9.17□□□□□ -0.94
CNOT4-212ENST00000541284 APOBEC4Q8WW27 367 aaKnown RBP9.17□□□□□ -0.94
CNOT4-212ENST00000541284 CLP1Q92989 425 aaKnown RBP9.17□□□□□ -0.94
CNOT4-212ENST00000541284 METTL2AQ96IZ6 378 aaKnown RBP9.17□□□□□ -0.94
CNOT4-212ENST00000541284 TPD52L3Q96J77 140 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 SDHCQ99643 169 aaPredicted RBP9.17□□□□□ -0.94
CNOT4-212ENST00000541284 COPS4Q9BT78 406 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 ANKHQ9HCJ1 492 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 PAIP2BQ9ULR5 123 aaKnown RBP9.17□□□□□ -0.94
CNOT4-212ENST00000541284 WDR37Q9Y2I8 494 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 AP1M2Q9Y6Q5 423 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 TCF20Q9UGU0 1960 aaKnown RBP9.17□□□□□ -0.94
CNOT4-212ENST00000541284 TNRC18O15417 2968 aaPredicted RBP9.17□□□□□ -0.94
CNOT4-212ENST00000541284 AGAP5A6NIR3 686 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 M0R129 80 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 NTRK1P04629 796 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 EPHA5P54756 1037 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 TEKQ02763 1124 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 PPIGQ13427 754 aaKnown RBP eCLIP9.17□□□□□ -0.94
CNOT4-212ENST00000541284 PDE7AQ13946 482 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 KCNC3Q14003 757 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 MPPE1Q53F39 396 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 HENMT1Q5T8I9 393 aaKnown RBP9.17□□□□□ -0.94
CNOT4-212ENST00000541284 STEAP3Q658P3 488 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 CCDC80Q76M96 950 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 OTOP2Q7RTS6 562 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 ADCK1Q86TW2 530 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 OR7G3Q8NG95 312 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 ARMC5Q96C12 935 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 ATP6V1HQ9UI12 483 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms