RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 TMPRSS11EQ9UL52 423 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 SCN5AQ14524 2016 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 KPNA5O15131 536 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 DLGAP3O95886 979 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 GABRB1P18505 474 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 LHCGRP22888 699 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 RAE1P78406 368 aaKnown RBP11.84□□□□□ -0.51
NPC1-202ENST00000540608 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.84□□□□□ -0.51
NPC1-202ENST00000540608 ZDHHC20Q5W0Z9 365 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 ZNF605Q86T29 641 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 DEPDC4Q8N2C3 294 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 ZNF784Q8NCA9 323 aaPredicted RBP11.84□□□□□ -0.51
NPC1-202ENST00000540608 COQ8BQ96D53 544 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 ECHDC3Q96DC8 303 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 CRELD1Q96HD1 420 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 PRDM8Q9NQV8 689 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 CREBZFQ9NS37 354 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 GPR83Q9NYM4 423 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 POU2F3Q9UKI9 436 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 MAPRE3Q9UPY8 281 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 POFUT2Q9Y2G5 429 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 ZNF451Q9Y4E5 1061 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 MN1Q10571 1320 aaPredicted RBP11.84□□□□□ -0.51
NPC1-202ENST00000540608 H0YIV9 168 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 HAT1O14929 419 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 TLL1O43897 1013 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 AOC2O75106 756 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 INHAP05111 366 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 STSP08842 583 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 HSD3B1P14060 373 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 IDSP22304 550 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 HSD3B2P26439 372 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 RGS6P49758 472 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 LMAN2Q12907 356 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 DOC2AQ14183 400 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 VEPH1Q14D04 833 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 EIF4HQ15056 248 aaKnown RBP11.84□□□□□ -0.51
NPC1-202ENST00000540608 DNAJB7Q7Z6W7 309 aaPredicted RBP11.84□□□□□ -0.51
NPC1-202ENST00000540608 THOC6Q86W42 341 aaKnown RBP11.84□□□□□ -0.51
NPC1-202ENST00000540608 RASGRP3Q8IV61 690 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 NPAS3Q8IXF0 933 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 STX19Q8N4C7 294 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 IGSF21Q96ID5 467 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 MCCC1Q96RQ3 725 aaPredicted RBP11.84□□□□□ -0.51
NPC1-202ENST00000540608 OR51E2Q9H255 320 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 SUV39H2Q9H5I1 410 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 BRF2Q9HAW0 419 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 RAD18Q9NS91 495 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 RLIMQ9NVW2 624 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 CLEC4EQ9ULY5 219 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 LOC100506127A0A0U1RQW1 187 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 A8MVJ9 347 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 ADORA3P0DMS8 318 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 SPNP16150 400 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 GTF2E2P29084 291 aaKnown RBP11.83□□□□□ -0.52
NPC1-202ENST00000540608 IDH2P48735 452 aaKnown RBP11.83□□□□□ -0.52
NPC1-202ENST00000540608 SPINT3P49223 89 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 PCYT1AP49585 367 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 SNRPD1P62314 119 aaKnown RBP11.83□□□□□ -0.52
NPC1-202ENST00000540608 OLR1P78380 273 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 GAB1Q13480 694 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 KRR1Q13601 381 aaKnown RBP11.83□□□□□ -0.52
NPC1-202ENST00000540608 DDX39BQ13838 428 aaKnown RBP11.83□□□□□ -0.52
NPC1-202ENST00000540608 IRF3Q14653 427 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 MICAQ29983 383 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 ARMCX4Q5H9R4 360 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 ARL14EPQ8N8R7 260 aaPredicted RBP11.83□□□□□ -0.52
NPC1-202ENST00000540608 QPCTLQ9NXS2 382 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 ZNF282Q9UDV7 671 aaPredicted RBP11.83□□□□□ -0.52
NPC1-202ENST00000540608 KLK4Q9Y5K2 254 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 PEX16Q9Y5Y5 336 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 E7EQ34 232 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 PLK4O00444 970 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 PCDH7O60245 1069 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 SNX4O95219 450 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 MED26O95402 600 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 ANXA4P09525 319 aaPredicted RBP11.83□□□□□ -0.52
NPC1-202ENST00000540608 HLA-EP13747 358 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 NUDT6P53370 316 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 LRRC74AQ0VAA2 488 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 ST3GAL4Q11206 333 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 TOR1AIP1Q5JTV8 583 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 ZNF362Q5T0B9 420 aaPredicted RBP11.83□□□□□ -0.52
NPC1-202ENST00000540608 C10orf62Q5T681 223 aaPredicted RBP11.83□□□□□ -0.52
NPC1-202ENST00000540608 TPGS2Q68CL5 300 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 TXNDC8Q6A555 127 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 GRHL2Q6ISB3 625 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 SERPINA13PQ6UXR4 307 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.83□□□□□ -0.523e-7■■■■■ 26.8
NPC1-202ENST00000540608 METTL4Q8N3J2 472 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 CHAC2Q8WUX2 184 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 CLP1Q92989 425 aaKnown RBP11.83□□□□□ -0.52
NPC1-202ENST00000540608 RNF167Q9H6Y7 350 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 LAMA3Q16787 3333 aa11.83□□□□□ -0.52
NPC1-202ENST00000540608 RNASET2O00584 256 aaKnown RBP11.82□□□□□ -0.52
NPC1-202ENST00000540608 ASNA1O43681 348 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 ETHE1O95571 254 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 PTHP01270 115 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 C1SP09871 688 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 CD70P32970 193 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms