RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 MEF2AQ02078 507 aaPredicted RBP11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 OC90Q02509 493 aaPredicted RBP11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 NAE1Q13564 534 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 PWP1Q13610 501 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 SPINK14Q6IE38 97 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 SLC25A25Q6KCM7 469 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 GALNTL5Q7Z4T8 443 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 GAS2L3Q86XJ1 694 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 SIAH3Q8IW03 269 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 PALM2Q8IXS6 379 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 SHISA5Q8N114 240 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 EID3Q8N140 333 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 GHDCQ8N2G8 530 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 ABHD11Q8NFV4 315 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 ZCCHC10Q8TBK6 192 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 ELP5Q8TE02 316 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 PHF10Q8WUB8 498 aaKnown RBP11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 PEX11GQ96HA9 241 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 HES7Q9BYE0 225 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 TRIM45Q9H8W5 580 aaPredicted RBP11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 GPAMQ9HCL2 828 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 ANKRD10Q9NXR5 420 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 LRFN1Q9P244 771 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 ADAMTS6Q9UKP5 1117 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 NPIPA1Q9UND3 350 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 SH2B3Q9UQQ2 575 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 NAALAD2Q9Y3Q0 740 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 OTOGQ6ZRI0 2925 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 FBN2P35556 2912 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 MAN1A2O60476 641 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 GALR3O60755 368 aaPredicted RBP11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 FHP07954 510 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 SNRPB2P08579 225 aaKnown RBP11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 F7P08709 466 aaPredicted RBP11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 HIST1H2AGP0C0S8 130 aaPredicted RBP11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 CCDC175P0C221 793 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 CDH1P12830 882 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 NPPBP16860 134 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 HIST1H2ADP20671 130 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 CCR8P51685 355 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 OR4D2P58180 307 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 DHX9Q08211 1270 aaKnown RBP11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 HSP90AA5PQ58FG0 334 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 STRA8Q7Z7C7 330 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 RPS19BP1Q86WX3 136 aaKnown RBP11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 SPNS2Q8IVW8 549 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 ZNF295-AS1Q8N0V1 137 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 MYO1HQ8N1T3 1032 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 C2CD4AQ8NCU7 369 aaPredicted RBP11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 OR4K1Q8NGD4 311 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 GABPB2Q8TAK5 448 aaPredicted RBP11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 EEF1AKMT1Q8WVE0 214 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 TSLPQ969D9 159 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 TBC1D20Q96BZ9 403 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 C14orf79Q96F83 325 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 HIST1H2AHQ96KK5 128 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 SIGLEC10Q96LC7 697 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 OLFM1Q99784 485 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 HIST1H2AJQ99878 128 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 TRIM51Q9BSJ1 452 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 H2AFJQ9BTM1 129 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 ATG10Q9H0Y0 220 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 CLK4Q9HAZ1 481 aaKnown RBP11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 LZTFL1Q9NQ48 299 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 TAS2R13Q9NYV9 303 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 MAD1L1Q9Y6D9 718 aa11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 TEP1Q99973 2627 aaKnown RBP11.28□□□□□ -0.6
CBX3P4-202ENST00000540428 TRBC2A0A5B9 178 aa11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 E9PLN8 166 aa11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 GOLGA8MH3BSY2 632 aa11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 NDC80O14777 642 aa11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 NDUFS4O43181 175 aa11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 SLC25A12O75746 678 aa11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 CDC123O75794 336 aaPredicted RBP11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 ABOP16442 354 aa11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 ALOX12P18054 663 aa11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 CAPN3P20807 821 aa11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 CXCR5P32302 372 aa11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 CYB561P49447 251 aa11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 AP1S2P56377 157 aa11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 TIAL1Q01085 375 aaKnown RBP eCLIP11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 CYP1B1Q16678 543 aa11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 KCTD19Q17RG1 926 aaPredicted RBP11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 DUPD1Q68J44 220 aa11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 TTC27Q6P3X3 843 aa11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 QSOX2Q6ZRP7 698 aa11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 AGGF1Q8N302 714 aaeCLIP11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 RASGEF1CQ8N431 466 aa11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 TBC1D19Q8N5T2 526 aa11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 NAT8LQ8N9F0 302 aa11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 POGLUT1Q8NBL1 392 aa11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 ZNF740Q8NDX6 193 aa11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 OR5T3Q8NGG3 340 aa11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 MAGOHBQ96A72 148 aaKnown RBP11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 SPOCK3Q9BQ16 436 aa11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 VKORC1Q9BQB6 163 aa11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 RBCK1Q9BYM8 510 aa11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 CDCP1Q9H5V8 836 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms