RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 FAM25CB3EWG5 89 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 FAM25GB3EWG6 89 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 PTGES3LE9PB15 166 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 H3BMM5 538 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 SLC28A1O00337 649 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 PLK4O00444 970 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 CXCR6O00574 342 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 AURKAO14965 403 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 RAD51BO15315 384 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 ZW10O43264 779 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 LDB2O43679 373 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 PEX14O75381 377 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 PMPCBO75439 489 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 RHOBTB1O94844 696 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 KCNK5O95279 499 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 PEX11BO96011 259 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 FGF1P05230 155 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 HLA-DQB2P05538 268 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 ODC1P11926 461 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 MYCLP1P12525 358 aaPredicted RBP7.4□□□□□ -1.22
CCDC60-204ENST00000539847 M6PRP20645 277 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 CSRP1P21291 193 aaKnown RBP7.4□□□□□ -1.22
CCDC60-204ENST00000539847 PCSK1P29120 753 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 CCR1P32246 355 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 S100A5P33763 92 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 DDOSTP39656 456 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 MPLP40238 635 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 ADH7P40394 386 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 FOXA1P55317 472 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 OLR1P78380 273 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 ELP6Q0PNE2 266 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 ABRQ12979 859 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 DUSP4Q13115 394 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 DNASE1L3Q13609 305 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 VEPH1Q14D04 833 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 EIF4HQ15056 248 aaKnown RBP7.4□□□□□ -1.22
CCDC60-204ENST00000539847 PON2Q15165 354 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 PCBP2Q15366 365 aaKnown RBP eCLIP7.4□□□□□ -1.22
CCDC60-204ENST00000539847 OR4D1Q15615 310 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 TTLL9Q3SXZ7 439 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 FUT11Q495W5 492 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 PYCR3Q53H96 274 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 OVOS1Q6IE37 1185 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 ZNF549Q6P9A3 640 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 Q6ZSR9 355 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 DET1Q7L5Y6 550 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 SYT13Q7L8C5 426 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 SYVN1Q86TM6 617 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 CMTM8Q8IZV2 173 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 TMEM130Q8N3G9 435 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 POC5Q8NA72 575 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 NDNFQ8TB73 568 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 NDRG1Q92597 394 aaKnown RBP7.4□□□□□ -1.22
CCDC60-204ENST00000539847 MYDGFQ969H8 173 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 TP53INP1Q96A56 240 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 MED30Q96HR3 178 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 DHRS1Q96LJ7 313 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 TEX37Q96LM6 180 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 LRRC3BQ96PB8 259 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 TRIB3Q96RU7 358 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 LPIN3Q9BQK8 851 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 MED10Q9BTT4 135 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 ITPAQ9BY32 194 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 DCSTAMPQ9H295 470 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 ARRDC1-AS1Q9H2J1 176 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 ATXN3LQ9H3M9 355 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 SMURF2Q9HAU4 748 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 RXFP3Q9NSD7 469 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 INTS7Q9NVH2 962 aaKnown RBP7.4□□□□□ -1.22
CCDC60-204ENST00000539847 ERVK-18Q9QC07 812 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 OPTCQ9UBM4 332 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 VPS51Q9UID3 782 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 PCTPQ9UKL6 214 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 RNF112Q9ULX5 631 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 MAN2B2Q9Y2E5 1009 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 PCDHGB2Q9Y5G2 931 aa7.4□□□□□ -1.22
CCDC60-204ENST00000539847 TICRRQ7Z2Z1 1910 aa7.4□□□□□ -1.23
CCDC60-204ENST00000539847 CITO14578 2027 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 TRIP11Q15643 1979 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 SYNJ2BP-COX16A0A087WUM0 186 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 TRBV5-3A0A0A0MS03 114 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 HMX3A6NHT5 357 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 A8MVJ9 347 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 NPIPB8E9PQR5 432 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 DFFAO00273 331 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 WNT9AO14904 365 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 IRAK2O43187 625 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 HS6ST1O60243 411 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 CREG1O75629 220 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 CCNKO75909 580 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 BEST1O76090 585 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 KCNK2O95069 426 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 PRAMEF12O95522 483 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 F7P08709 466 aaPredicted RBP7.39□□□□□ -1.23
CCDC60-204ENST00000539847 CEACAM1P13688 526 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 ARSAP15289 507 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 CD36P16671 472 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 GJA1P17302 382 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 FPR1P21462 350 aa7.39□□□□□ -1.23
CCDC60-204ENST00000539847 AGXTP21549 392 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms