RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 COL27A1Q8IZC6 1860 aaPredicted RBP14.73□□□□□ -0.05
DDB1-216ENST00000539739 HCRTR1O43613 425 aa14.73□□□□□ -0.05
DDB1-216ENST00000539739 ULK1O75385 1050 aa14.73□□□□□ -0.05
DDB1-216ENST00000539739 CLEC3AO75596 197 aa14.73□□□□□ -0.05
DDB1-216ENST00000539739 OR2B3O76000 313 aa14.73□□□□□ -0.05
DDB1-216ENST00000539739 CCL4P13236 92 aa14.73□□□□□ -0.05
DDB1-216ENST00000539739 PEX19P40855 299 aa14.73□□□□□ -0.05
DDB1-216ENST00000539739 MDH1P40925 334 aaKnown RBP14.73□□□□□ -0.05
DDB1-216ENST00000539739 PIK3CBP42338 1070 aa14.73□□□□□ -0.05
DDB1-216ENST00000539739 CYP4F2P78329 520 aa14.73□□□□□ -0.05
DDB1-216ENST00000539739 PWP1Q13610 501 aa14.73□□□□□ -0.05
DDB1-216ENST00000539739 DDX39BQ13838 428 aaKnown RBP14.73□□□□□ -0.05
DDB1-216ENST00000539739 C3orf38Q5JPI3 329 aa14.73□□□□□ -0.05
DDB1-216ENST00000539739 WASHC2DQ5SRD0 308 aa14.73□□□□□ -0.05
DDB1-216ENST00000539739 MANEAQ5SRI9 462 aa14.73□□□□□ -0.05
DDB1-216ENST00000539739 VN1R4Q7Z5H5 301 aa14.73□□□□□ -0.05
DDB1-216ENST00000539739 PARP9Q8IXQ6 854 aa14.73□□□□□ -0.05
DDB1-216ENST00000539739 CSNK1A1LQ8N752 337 aa14.73□□□□□ -0.05
DDB1-216ENST00000539739 BMPERQ8N8U9 685 aa14.73□□□□□ -0.05
DDB1-216ENST00000539739 TTC29Q8NA56 475 aaPredicted RBP14.73□□□□□ -0.05
DDB1-216ENST00000539739 WDR20Q8TBZ3 569 aa14.73□□□□□ -0.05
DDB1-216ENST00000539739 AGR3Q8TD06 166 aa14.73□□□□□ -0.05
DDB1-216ENST00000539739 KCNA7Q96RP8 456 aa14.73□□□□□ -0.05
DDB1-216ENST00000539739 C20orf27Q9GZN8 174 aa14.73□□□□□ -0.05
DDB1-216ENST00000539739 ZNF395Q9H8N7 513 aaPredicted RBP14.73□□□□□ -0.05
DDB1-216ENST00000539739 PISDQ9UG56 409 aa14.73□□□□□ -0.05
DDB1-216ENST00000539739 ZDHHC2Q9UIJ5 367 aa14.73□□□□□ -0.05
DDB1-216ENST00000539739 FIS1Q9Y3D6 152 aa14.73□□□□□ -0.05
DDB1-216ENST00000539739 URADA6NGE7 173 aa14.72□□□□□ -0.05
DDB1-216ENST00000539739 MANBAO00462 879 aa14.72□□□□□ -0.05
DDB1-216ENST00000539739 NDUFS4O43181 175 aa14.72□□□□□ -0.05
DDB1-216ENST00000539739 SERPINA6P08185 405 aa14.72□□□□□ -0.05
DDB1-216ENST00000539739 RPL14P50914 215 aaKnown RBP14.72□□□□□ -0.05
DDB1-216ENST00000539739 MAPK10P53779 464 aa14.72□□□□□ -0.05
DDB1-216ENST00000539739 FOXA1P55317 472 aa14.72□□□□□ -0.05
DDB1-216ENST00000539739 GUCY1A3Q02108 690 aa14.72□□□□□ -0.05
DDB1-216ENST00000539739 ZNF33BQ06732 778 aa14.72□□□□□ -0.05
DDB1-216ENST00000539739 GRM7Q14831 915 aa14.72□□□□□ -0.05
DDB1-216ENST00000539739 CLEC6AQ6EIG7 209 aa14.72□□□□□ -0.05
DDB1-216ENST00000539739 CEACAM20Q6UY09 585 aa14.72□□□□□ -0.05
DDB1-216ENST00000539739 RGS9BPQ6ZS82 235 aa14.72□□□□□ -0.05
DDB1-216ENST00000539739 DGLUCYQ7Z3D6 616 aa14.72□□□□□ -0.05
DDB1-216ENST00000539739 OR1L3Q8NH93 324 aa14.72□□□□□ -0.05
DDB1-216ENST00000539739 HUS1BQ8NHY5 278 aa14.72□□□□□ -0.05
DDB1-216ENST00000539739 ZNF473Q8WTR7 871 aaKnown RBP14.72□□□□□ -0.05
DDB1-216ENST00000539739 SNRNP27Q8WVK2 155 aaKnown RBP14.72□□□□□ -0.05
DDB1-216ENST00000539739 LZICQ8WZA0 190 aa14.72□□□□□ -0.05
DDB1-216ENST00000539739 MTFMTQ96DP5 389 aaKnown RBP14.72□□□□□ -0.05
DDB1-216ENST00000539739 TM4SF19Q96DZ7 209 aa14.72□□□□□ -0.05
DDB1-216ENST00000539739 ZNF285Q96NJ3 590 aa14.72□□□□□ -0.05
DDB1-216ENST00000539739 TAAR9Q96RI9 348 aa14.72□□□□□ -0.05
DDB1-216ENST00000539739 SORT1Q99523 831 aa14.72□□□□□ -0.05
DDB1-216ENST00000539739 MTERF1Q99551 399 aaKnown RBP14.72□□□□□ -0.05
DDB1-216ENST00000539739 TNFRSF12AQ9NP84 129 aa14.72□□□□□ -0.05
DDB1-216ENST00000539739 SATB2Q9UPW6 733 aa14.72□□□□□ -0.05
DDB1-216ENST00000539739 ANKRD65E5RJM6 399 aa14.71□□□□□ -0.05
DDB1-216ENST00000539739 FOXE1O00358 373 aaPredicted RBP14.71□□□□□ -0.05
DDB1-216ENST00000539739 HYAL3O43820 417 aaPredicted RBP14.71□□□□□ -0.05
DDB1-216ENST00000539739 FGF5P12034 268 aa14.71□□□□□ -0.05
DDB1-216ENST00000539739 ITIH1P19827 911 aa14.71□□□□□ -0.05
DDB1-216ENST00000539739 NEK2P51955 445 aa14.71□□□□□ -0.05
DDB1-216ENST00000539739 OCRLQ01968 901 aa14.71□□□□□ -0.05
DDB1-216ENST00000539739 FOXC1Q12948 553 aa14.71□□□□□ -0.05
DDB1-216ENST00000539739 DYNC1I2Q13409 638 aaKnown RBP14.71□□□□□ -0.05
DDB1-216ENST00000539739 NDUFA9Q16795 377 aa14.71□□□□□ -0.05
DDB1-216ENST00000539739 FAM214AQ32MH5 1076 aa14.71□□□□□ -0.05
DDB1-216ENST00000539739 SGO1Q5FBB7 561 aa14.71□□□□□ -0.05
DDB1-216ENST00000539739 DCAF12Q5T6F0 453 aa14.71□□□□□ -0.05
DDB1-216ENST00000539739 TMEM164Q5U3C3 297 aa14.71□□□□□ -0.05
DDB1-216ENST00000539739 ATG14Q6ZNE5 492 aa14.71□□□□□ -0.05
DDB1-216ENST00000539739 CRLF3Q8IUI8 442 aa14.71□□□□□ -0.05
DDB1-216ENST00000539739 ZNF781Q8N8C0 355 aa14.71□□□□□ -0.05
DDB1-216ENST00000539739 B4GALNT2Q8NHY0 566 aa14.71□□□□□ -0.05
DDB1-216ENST00000539739 NT5CQ8TCD5 201 aa14.71□□□□□ -0.05
DDB1-216ENST00000539739 BCAS4Q8TDM0 211 aa14.71□□□□□ -0.05
DDB1-216ENST00000539739 CREB3L4Q8TEY5 395 aa14.71□□□□□ -0.05
DDB1-216ENST00000539739 CMTM7Q96FZ5 175 aa14.71□□□□□ -0.05
DDB1-216ENST00000539739 PRR11Q96HE9 360 aaPredicted RBP14.71□□□□□ -0.05
DDB1-216ENST00000539739 FAR2Q96K12 515 aa14.71□□□□□ -0.05
DDB1-216ENST00000539739 CENPKQ9BS16 269 aa14.71□□□□□ -0.05
DDB1-216ENST00000539739 ZPBPQ9BS86 351 aa14.71□□□□□ -0.05
DDB1-216ENST00000539739 ASPSCR1Q9BZE9 553 aa14.71□□□□□ -0.05
DDB1-216ENST00000539739 SLC7A5P2Q9GIP4 190 aa14.71□□□□□ -0.05
DDB1-216ENST00000539739 SPRTNQ9H040 489 aaPredicted RBP14.71□□□□□ -0.05
DDB1-216ENST00000539739 PFDN4Q9NQP4 134 aa14.71□□□□□ -0.05
DDB1-216ENST00000539739 HAO1Q9UJM8 370 aa14.71□□□□□ -0.05
DDB1-216ENST00000539739 MDC1Q14676 2089 aaKnown RBP14.7□□□□□ -0.06
DDB1-216ENST00000539739 PDYNP01213 254 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 STATHP02808 62 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 HSD3B1P14060 373 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 PTX3P26022 381 aaPredicted RBP14.7□□□□□ -0.06
DDB1-216ENST00000539739 HSD3B2P26439 372 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 SERPINB3P29508 390 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 ARSFP54793 590 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 STXBP1P61764 594 aaKnown RBP14.7□□□□□ -0.06
DDB1-216ENST00000539739 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.7□□□□□ -0.06
DDB1-216ENST00000539739 LRRC23Q53EV4 343 aaPredicted RBP14.7□□□□□ -0.06
DDB1-216ENST00000539739 YOD1Q5VVQ6 348 aaPredicted RBP14.7□□□□□ -0.06
DDB1-216ENST00000539739 GARNL3Q5VVW2 1013 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 KANK2Q63ZY3 851 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms