RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 ICAM2P13598 275 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 ALOX12P18054 663 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 GNAZP19086 355 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 SOX11P35716 441 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 GGT5P36269 586 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 XCR1P46094 333 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 AGTR2P50052 363 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 SNRPNP63162 240 aaKnown RBP10.93□□□□□ -0.66
RTN3-209ENST00000538995 MEF2AQ02078 507 aaPredicted RBP10.93□□□□□ -0.66
RTN3-209ENST00000538995 GUCY2DQ02846 1103 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 EEF1A2Q05639 463 aaKnown RBP10.93□□□□□ -0.66
RTN3-209ENST00000538995 MFAP5Q13361 173 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 PCOLCEQ15113 449 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 KBTBD12Q3ZCT8 623 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 CRB2Q5IJ48 1285 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 B3GNTL1Q67FW5 361 aaPredicted RBP10.93□□□□□ -0.66
RTN3-209ENST00000538995 ISLR2Q6UXK2 745 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 CCDC91Q7Z6B0 441 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 PDSS2Q86YH6 399 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 GPSM1Q86YR5 675 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 ZNF740Q8NDX6 193 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 TTLQ8NG68 377 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 OR51Q1Q8NH59 317 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 FBF1Q8TES7 1133 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 UBXN10Q96LJ8 280 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 LMF1Q96S06 567 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 MACROD1Q9BQ69 325 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 MESP1Q9BRJ9 268 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 TUBB6Q9BUF5 446 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 CAPS2Q9BXY5 557 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 CAB39LQ9H9S4 337 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 ZDHHC18Q9NUE0 388 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 GPRC5BQ9NZH0 403 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 HCN3Q9P1Z3 774 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 COPG2Q9UBF2 871 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 NAALAD2Q9Y3Q0 740 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 PCDHGA10Q9Y5H3 936 aa10.93□□□□□ -0.66
RTN3-209ENST00000538995 TNRC6AQ8NDV7 1962 aaKnown RBP10.93□□□□□ -0.66
RTN3-209ENST00000538995 CCDC189A1A4V9 331 aa10.92□□□□□ -0.66
RTN3-209ENST00000538995 KIF2AO00139 706 aaPredicted RBP10.92□□□□□ -0.66
RTN3-209ENST00000538995 GALR3O60755 368 aaPredicted RBP10.92□□□□□ -0.66
RTN3-209ENST00000538995 URI1O94763 535 aaPredicted RBP10.92□□□□□ -0.66
RTN3-209ENST00000538995 WDR47O94967 919 aa10.92□□□□□ -0.66
RTN3-209ENST00000538995 SERPINA6P08185 405 aa10.92□□□□□ -0.66
RTN3-209ENST00000538995 CD1DP15813 335 aa10.92□□□□□ -0.66
RTN3-209ENST00000538995 JAK1P23458 1154 aa10.92□□□□□ -0.66
RTN3-209ENST00000538995 CRABP2P29373 138 aa10.92□□□□□ -0.66
RTN3-209ENST00000538995 EFNA3P52797 238 aa10.92□□□□□ -0.66
RTN3-209ENST00000538995 CDC16Q13042 620 aa10.92□□□□□ -0.66
RTN3-209ENST00000538995 TLR1Q15399 786 aa10.92□□□□□ -0.66
RTN3-209ENST00000538995 TRADDQ15628 312 aa10.92□□□□□ -0.66
RTN3-209ENST00000538995 PLEKHN1Q494U1 663 aaPredicted RBP10.92□□□□□ -0.66
RTN3-209ENST00000538995 MINDY4Q4G0A6 757 aa10.92□□□□□ -0.66
RTN3-209ENST00000538995 SULT1C3Q6IMI6 304 aa10.92□□□□□ -0.66
RTN3-209ENST00000538995 RELL1Q8IUW5 271 aa10.92□□□□□ -0.66
RTN3-209ENST00000538995 FAM26EQ8N5C1 309 aa10.92□□□□□ -0.66
RTN3-209ENST00000538995 PPM1NQ8N819 430 aa10.92□□□□□ -0.66
RTN3-209ENST00000538995 ANKRD53Q8N9V6 530 aa10.92□□□□□ -0.66
RTN3-209ENST00000538995 PDPRQ8NCN5 879 aa10.92□□□□□ -0.66
RTN3-209ENST00000538995 MNS1Q8NEH6 495 aa10.92□□□□□ -0.66
RTN3-209ENST00000538995 KIAA1191Q96A73 305 aa10.92□□□□□ -0.66
RTN3-209ENST00000538995 CYTH2Q99418 400 aa10.92□□□□□ -0.66
RTN3-209ENST00000538995 SLC6A16Q9GZN6 736 aa10.92□□□□□ -0.66
RTN3-209ENST00000538995 TSPYL1Q9H0U9 437 aa10.92□□□□□ -0.66
RTN3-209ENST00000538995 SPNS1Q9H2V7 528 aa10.92□□□□□ -0.66
RTN3-209ENST00000538995 EHD1Q9H4M9 534 aa10.92□□□□□ -0.66
RTN3-209ENST00000538995 ZBTB20Q9HC78 741 aaPredicted RBP10.92□□□□□ -0.66
RTN3-209ENST00000538995 PLSCR2Q9NRY7 297 aa10.92□□□□□ -0.66
RTN3-209ENST00000538995 WWOXQ9NZC7 414 aa10.92□□□□□ -0.66
RTN3-209ENST00000538995 LUZP4Q9P127 313 aa10.92□□□□□ -0.66
RTN3-209ENST00000538995 CCDC88CQ9P219 2028 aa10.92□□□□□ -0.66
RTN3-209ENST00000538995 ESYT3A0FGR9 886 aa10.91□□□□□ -0.66
RTN3-209ENST00000538995 H2AFYO75367 372 aaKnown RBP10.91□□□□□ -0.66
RTN3-209ENST00000538995 JRKO75564 520 aa10.91□□□□□ -0.66
RTN3-209ENST00000538995 SERPIND1P05546 499 aa10.91□□□□□ -0.66
RTN3-209ENST00000538995 FHP07954 510 aa10.91□□□□□ -0.66
RTN3-209ENST00000538995 ZNF888P0CJ79 500 aaPredicted RBP10.91□□□□□ -0.66
RTN3-209ENST00000538995 C1GALT1C1LP0DN25 315 aa10.91□□□□□ -0.66
RTN3-209ENST00000538995 HPDP32754 393 aaPredicted RBP10.91□□□□□ -0.66
RTN3-209ENST00000538995 PHBP35232 272 aa10.91□□□□□ -0.66
RTN3-209ENST00000538995 TSFMP43897 325 aaKnown RBP10.91□□□□□ -0.66
RTN3-209ENST00000538995 STXBP1P61764 594 aaKnown RBP10.91□□□□□ -0.66
RTN3-209ENST00000538995 SLC7A5Q01650 507 aa10.91□□□□□ -0.66
RTN3-209ENST00000538995 UBAP2LQ14157 1087 aaKnown RBP10.91□□□□□ -0.66
RTN3-209ENST00000538995 ZNF169Q14929 603 aaPredicted RBP10.91□□□□□ -0.66
RTN3-209ENST00000538995 SLMAPQ14BN4 828 aa10.91□□□□□ -0.66
RTN3-209ENST00000538995 DEFB134Q4QY38 66 aa10.91□□□□□ -0.66
RTN3-209ENST00000538995 PRR30Q53SZ7 412 aaPredicted RBP10.91□□□□□ -0.66
RTN3-209ENST00000538995 MFSD4BQ5TF39 518 aa10.91□□□□□ -0.66
RTN3-209ENST00000538995 PLAG1Q6DJT9 500 aa10.91□□□□□ -0.66
RTN3-209ENST00000538995 FAAH2Q6GMR7 532 aa10.91□□□□□ -0.66
RTN3-209ENST00000538995 SLCO4C1Q6ZQN7 724 aa10.91□□□□□ -0.66
RTN3-209ENST00000538995 CPEB2Q7Z5Q1 589 aaKnown RBP10.91□□□□□ -0.66
RTN3-209ENST00000538995 TBC1D1Q86TI0 1168 aaPredicted RBP10.91□□□□□ -0.66
RTN3-209ENST00000538995 CUZD1Q86UP6 607 aa10.91□□□□□ -0.66
RTN3-209ENST00000538995 KRT78Q8N1N4 520 aa10.91□□□□□ -0.66
RTN3-209ENST00000538995 MMGT1Q8N4V1 131 aa10.91□□□□□ -0.66
RTN3-209ENST00000538995 PLPP5Q8NEB5 264 aa10.91□□□□□ -0.66
RTN3-209ENST00000538995 STAG3L4Q8TBR4 150 aa10.91□□□□□ -0.66
RTN3-209ENST00000538995 UTP15Q8TED0 518 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms