RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	SMIM10L1	P0DMW3	83 aa		11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	COL6A2	P12110	1019 aa		11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	MAGEA12	P43365	314 aa		11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	CD97	P48960	835 aa		11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	SERPINB8	P50452	374 aa		11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	STXBP1	P61764	594 aa	Known RBP	11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	MEF2A	Q02078	507 aa	Predicted RBP	11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	CHAF1B	Q13112	559 aa		11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	PAGE2B	Q5JRK9	111 aa		11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	IRAK1BP1	Q5VVH5	260 aa		11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	JMJD6	Q6NYC1	403 aa	Predicted RBP	11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	TMIGD1	Q6UXZ0	262 aa		11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	TRMT10C	Q7L0Y3	403 aa	Known RBP	11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	TMPRSS11B	Q86T26	416 aa		11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	PTRH1	Q86Y79	214 aa	Known RBP	11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	ZC3H7A	Q8IWR0	971 aa	Known RBP	11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	KCT2	Q8NC54	265 aa		11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	PLPP5	Q8NEB5	264 aa		11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	OR51Q1	Q8NH59	317 aa		11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	PNPLA2	Q96AD5	504 aa		11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	SMIM10	Q96HG1	83 aa		11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	LMF1	Q96S06	567 aa		11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	TMEM79	Q9BSE2	394 aa		11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	CD244	Q9BZW8	370 aa		11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	LHPP	Q9H008	270 aa		11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	ZNF700	Q9H0M5	742 aa		11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	WWOX	Q9NZC7	414 aa		11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	C19orf25	Q9UFG5	118 aa	Predicted RBP	11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	FETUB	Q9UGM5	382 aa		11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	RNF112	Q9ULX5	631 aa		11.65	□□□□□ -0.54
CLTCL1-205	ENST00000538828	TNRC6A	Q8NDV7	1962 aa	Known RBP	11.65	□□□□□ -0.55
CLTCL1-205	ENST00000538828	SCN2A	Q99250	2005 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	SCN3A	Q9NY46	2000 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828		A0A087WUV0	522 aa	Predicted RBP	11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828		A0A088AWK7	358 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	IGHV1-45	A0A0A0MS14	117 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	CLGN	O14967	610 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	NDUFS4	O43181	175 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	KLK8	O60259	260 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	CLEC3A	O75596	197 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	FAM155B	O75949	473 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	SORBS2	O94875	1100 aa	Known RBP	11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	KLHL18	O94889	574 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	KLHL2	O95198	593 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	ALDOA	P04075	364 aa	Known RBP	11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	S100B	P04271	92 aa	Predicted RBP	11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	HEXB	P07686	556 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	INHBA	P08476	426 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	TFEB	P19484	476 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	ZNF10	P21506	573 aa	Predicted RBP	11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	SERPINB1	P30740	379 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	TLE1	Q04724	770 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	OR4D1	Q15615	310 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	PDK4	Q16654	411 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	ADPRM	Q3LIE5	342 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	AGAP7P	Q5VUJ5	663 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	KLC3	Q6P597	504 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	CMC1	Q7Z7K0	106 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	LAPTM4B	Q86VI4	370 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	LCA5	Q86VQ0	697 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	CENPL	Q8N0S6	344 aa	Predicted RBP	11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	DTWD1	Q8N5C7	304 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	METTL27	Q8N6F8	245 aa	Predicted RBP	11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	ANKRD53	Q8N9V6	530 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	ZNF740	Q8NDX6	193 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	C7orf57	Q8NEG2	295 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	OR9A4	Q8NGU2	314 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	CREB3L4	Q8TEY5	395 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	PPP4R1	Q8TF05	950 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	METTL21A	Q8WXB1	218 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	IFT81	Q8WYA0	676 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	UBE2E3	Q969T4	207 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	PTCD3	Q96EY7	689 aa	Known RBP	11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	AGAP4	Q96P64	663 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	TUBB6	Q9BUF5	446 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	NPL	Q9BXD5	320 aa	Predicted RBP	11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	EPN3	Q9H201	632 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	RHBG	Q9H310	441 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	L2HGDH	Q9H9P8	463 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	SNX15	Q9NRS6	342 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	IGSF5	Q9NSI5	407 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	CD274	Q9NZQ7	290 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	ADGRE2	Q9UHX3	823 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	MKL2	Q9ULH7	1088 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	TMCO1	Q9UM00	188 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	MRPS2	Q9Y399	296 aa	Known RBP	11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	TSC22D4	Q9Y3Q8	395 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	TNPO3	Q9Y5L0	923 aa	Known RBP	11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828	IKBKG	Q9Y6K9	419 aa		11.64	□□□□□ -0.55
CLTCL1-205	ENST00000538828		A0A096LPK6	155 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	NSG1	A0A0A6YYJ2	146 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	UGDH	O60701	494 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	ALOX12B	O75342	701 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	WFS1	O76024	890 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	SERPINA7	P05543	415 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	RBP1	P09455	135 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	C8orf89	P0DMQ9	161 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	COX6A1	P12074	109 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	MTHFD2	P13995	350 aa		11.63	□□□□□ -0.55

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