RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 ROPN1Q9HAT0 212 aaPredicted RBP6.93□□□□□ -1.3
MSH6-209ENST00000538136 SLC40A1Q9NP59 571 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 HYKKA2RU49 373 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 TMEM114B3SHH9 223 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 HAT1O14929 419 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 TNFSF14O43557 240 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 AP1G1O43747 822 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 STK17BO94768 372 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 SERPINE1P05121 402 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 ZNF806P0C7X5 589 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 CD1DP15813 335 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 SUOXP51687 545 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 PLGLB1Q02325 96 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 SRYQ05066 204 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 ACAP2Q15057 778 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 ZC3H12BQ5HYM0 836 aaKnown RBP6.93□□□□□ -1.3
MSH6-209ENST00000538136 PRAMEF20Q5VT98 475 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 FRG2Q64ET8 278 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 TMEM207Q6UWW9 146 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 MAML2Q8IZL2 1156 aaPredicted RBP6.93□□□□□ -1.3
MSH6-209ENST00000538136 DENND6BQ8NEG7 585 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 TWIST2Q8WVJ9 160 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 EGLN2Q96KS0 407 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 FRG2BQ96QU4 278 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 TMEM185BQ9H7F4 350 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 TMBIM4Q9HC24 238 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 TCF7L2Q9NQB0 619 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 ST14Q9Y5Y6 855 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 HIVEP3Q5T1R4 2406 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 NOTCH3Q9UM47 2321 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 CADP27708 2225 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 ZNF407Q9C0G0 2248 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 ZNF292O60281 2723 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 IGHV1OR21-1A0A087WYE8 117 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 MROH6A6NGR9 719 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 ZNF487B1APH4 448 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 PAPSS2O95340 614 aaPredicted RBP6.93□□□□□ -1.3
MSH6-209ENST00000538136 ZNF682O95780 498 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 IMPA1P29218 277 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 S100A3P33764 101 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 BUD31P41223 144 aaPredicted RBP6.93□□□□□ -1.3
MSH6-209ENST00000538136 OR4D2P58180 307 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 ZNF33BQ06732 778 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 ZNF155Q12901 538 aaPredicted RBP6.93□□□□□ -1.3
MSH6-209ENST00000538136 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.93□□□□□ -1.3
MSH6-209ENST00000538136 PLEKHS1Q5SXH7 462 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 CCDC81Q6ZN84 652 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 GPR151Q8TDV0 419 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 RAB8BQ92930 207 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 AURKBQ96GD4 344 aaPredicted RBP6.93□□□□□ -1.3
MSH6-209ENST00000538136 TMEM74Q96NL1 305 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 PANX1Q96RD7 426 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 ECSITQ9BQ95 431 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 TACO1Q9BSH4 297 aaKnown RBP6.93□□□□□ -1.3
MSH6-209ENST00000538136 LRTM1Q9HBL6 345 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 ARNT2Q9HBZ2 717 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 RAXQ9Y2V3 346 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 PCDHGA11Q9Y5H2 935 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 GREB1Q4ZG55 1949 aa6.93□□□□□ -1.3
MSH6-209ENST00000538136 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.92□□□□□ -1.3
MSH6-209ENST00000538136 RGS14O43566 566 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 PCDH7O60245 1069 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 TCEA3O75764 348 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 POU2F2P09086 479 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 MAOAP21397 527 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 CCNFP41002 786 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 YAP1P46937 504 aaKnown RBP6.92□□□□□ -1.3
MSH6-209ENST00000538136 NUDT2P50583 147 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 ABCE1P61221 599 aaKnown RBP6.92□□□□□ -1.3
MSH6-209ENST00000538136 STXBP1P61764 594 aaKnown RBP6.92□□□□□ -1.3
MSH6-209ENST00000538136 HSD11B2P80365 405 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 BNC1Q01954 994 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 SRSF6Q13247 344 aaKnown RBP6.92□□□□□ -1.3
MSH6-209ENST00000538136 GRM7Q14831 915 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 CSRP2Q16527 193 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 LIPMQ5VYY2 423 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 BNIPLQ7Z465 357 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 ABI3BPQ7Z7G0 1075 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 MTDHQ86UE4 582 aaKnown RBP6.92□□□□□ -1.3
MSH6-209ENST00000538136 LMNTD2Q8IXW0 634 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 CBARPQ8N350 705 aaPredicted RBP6.92□□□□□ -1.3
MSH6-209ENST00000538136 OR4C6Q8NH72 309 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 WDR36Q8NI36 951 aaKnown RBP6.92□□□□□ -1.3
MSH6-209ENST00000538136 ZNF775Q96BV0 537 aaPredicted RBP6.92□□□□□ -1.3
MSH6-209ENST00000538136 PPCDCQ96CD2 204 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 VPS50Q96JG6 964 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 DEFB126Q9BYW3 111 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 MED4Q9NPJ6 270 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 KLK13Q9UKR3 277 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 IKZF3Q9UKT9 509 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 RPH3AQ9Y2J0 694 aaPredicted RBP6.92□□□□□ -1.3
MSH6-209ENST00000538136 PLLPQ9Y342 182 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 CAPN7Q9Y6W3 813 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 DNAJB5O75953 348 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 AP2A2O94973 939 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 ZWINTO95229 277 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 ALOX12P18054 663 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 CNTFP26441 200 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 PKNOX1P55347 436 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 ITGA1P56199 1179 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms