RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 ARL5AQ9Y689 179 aa8.53□□□□□ -1.04
USP28-205ENST00000537706 IGLV3-16A0A075B6K0 115 aa8.52□□□□□ -1.04
USP28-205ENST00000537706 OR2A25A4D2G3 310 aa8.52□□□□□ -1.04
USP28-205ENST00000537706 NSA2O95478 260 aaKnown RBP8.52□□□□□ -1.04
USP28-205ENST00000537706 CD48P09326 243 aa8.52□□□□□ -1.04
USP28-205ENST00000537706 OR56A5P0C7T3 313 aa8.52□□□□□ -1.04
USP28-205ENST00000537706 TCF4P15884 667 aa8.52□□□□□ -1.04
USP28-205ENST00000537706 CTSSP25774 331 aa8.52□□□□□ -1.04
USP28-205ENST00000537706 SLC25A11Q02978 314 aaKnown RBP8.52□□□□□ -1.04
USP28-205ENST00000537706 UBXN1Q04323 297 aa8.52□□□□□ -1.04
USP28-205ENST00000537706 PTPRCAPQ14761 206 aa8.52□□□□□ -1.04
USP28-205ENST00000537706 TEX44Q53QW1 395 aa8.52□□□□□ -1.04
USP28-205ENST00000537706 ABHD13Q7L211 337 aa8.52□□□□□ -1.04
USP28-205ENST00000537706 PCGF5Q86SE9 256 aa8.52□□□□□ -1.04
USP28-205ENST00000537706 SHISA5Q8N114 240 aa8.52□□□□□ -1.04
USP28-205ENST00000537706 KIF2BQ8N4N8 673 aa8.52□□□□□ -1.04
USP28-205ENST00000537706 IPMKQ8NFU5 416 aa8.52□□□□□ -1.04
USP28-205ENST00000537706 TNIP2Q8NFZ5 429 aa8.52□□□□□ -1.04
USP28-205ENST00000537706 CFAP61Q8NHU2 1237 aa8.52□□□□□ -1.04
USP28-205ENST00000537706 KIAA1191Q96A73 305 aa8.52□□□□□ -1.04
USP28-205ENST00000537706 TRMT61AQ96FX7 289 aaKnown RBP8.52□□□□□ -1.04
USP28-205ENST00000537706 CNPPD1Q9BV87 410 aa8.52□□□□□ -1.04
USP28-205ENST00000537706 ADAM19Q9H013 955 aa8.52□□□□□ -1.04
USP28-205ENST00000537706 EPB41L4BQ9H329 900 aa8.52□□□□□ -1.04
USP28-205ENST00000537706 KCMF1Q9P0J7 381 aa8.52□□□□□ -1.04
USP28-205ENST00000537706 HEY1Q9Y5J3 304 aa8.52□□□□□ -1.04
USP28-205ENST00000537706 SLC5A10A0PJK1 596 aa8.52□□□□□ -1.05
USP28-205ENST00000537706 MAGEB17A8MXT2 336 aa8.52□□□□□ -1.05
USP28-205ENST00000537706 ITGA10O75578 1167 aa8.52□□□□□ -1.05
USP28-205ENST00000537706 EPPINO95925 133 aa8.52□□□□□ -1.05
USP28-205ENST00000537706 IL18BPO95998 194 aa8.52□□□□□ -1.05
USP28-205ENST00000537706 MAGEA5P43359 124 aa8.52□□□□□ -1.05
USP28-205ENST00000537706 ETF1P62495 437 aaKnown RBP8.52□□□□□ -1.05
USP28-205ENST00000537706 XIAPP98170 497 aa8.52□□□□□ -1.05
USP28-205ENST00000537706 MPP3Q13368 585 aa8.52□□□□□ -1.05
USP28-205ENST00000537706 HKDC1Q2TB90 917 aa8.52□□□□□ -1.05
USP28-205ENST00000537706 SERPINA9Q86WD7 417 aa8.52□□□□□ -1.05
USP28-205ENST00000537706 REXO1L1PQ8IX06 675 aa8.52□□□□□ -1.05
USP28-205ENST00000537706 CYP4X1Q8N118 509 aa8.52□□□□□ -1.05
USP28-205ENST00000537706 TMEM251Q8N6I4 163 aa8.52□□□□□ -1.05
USP28-205ENST00000537706 GSDMBQ8TAX9 411 aa8.52□□□□□ -1.05
USP28-205ENST00000537706 RAD51AP1Q96B01 352 aa8.52□□□□□ -1.05
USP28-205ENST00000537706 CAPZA3Q96KX2 299 aa8.52□□□□□ -1.05
USP28-205ENST00000537706 CCDC77Q9BR77 488 aa8.52□□□□□ -1.05
USP28-205ENST00000537706 DPH7Q9BTV6 452 aa8.52□□□□□ -1.05
USP28-205ENST00000537706 MRPS30Q9NP92 439 aaKnown RBP8.52□□□□□ -1.05
USP28-205ENST00000537706 ABHD10Q9NUJ1 306 aa8.52□□□□□ -1.05
USP28-205ENST00000537706 SMARCAL1Q9NZC9 954 aa8.52□□□□□ -1.05
USP28-205ENST00000537706 SAMD15Q9P1V8 674 aa8.52□□□□□ -1.05
USP28-205ENST00000537706 FBXW2Q9UKT8 454 aa8.52□□□□□ -1.05
USP28-205ENST00000537706 GLSO94925 669 aaPredicted RBP8.51□□□□□ -1.05
USP28-205ENST00000537706 CCNDBP1O95273 360 aa8.51□□□□□ -1.05
USP28-205ENST00000537706 FTLP02792 175 aaPredicted RBP8.51□□□□□ -1.05
USP28-205ENST00000537706 CCDC175P0C221 793 aa8.51□□□□□ -1.05
USP28-205ENST00000537706 SRD5A1P18405 259 aa8.51□□□□□ -1.05
USP28-205ENST00000537706 CNR1P21554 472 aa8.51□□□□□ -1.05
USP28-205ENST00000537706 MC4RP32245 332 aa8.51□□□□□ -1.05
USP28-205ENST00000537706 SLC10A2Q12908 348 aaPredicted RBP8.51□□□□□ -1.05
USP28-205ENST00000537706 MEI1Q5TIA1 1274 aa8.51□□□□□ -1.05
USP28-205ENST00000537706 MDGA2Q7Z553 956 aa8.51□□□□□ -1.05
USP28-205ENST00000537706 SLC26A11Q86WA9 606 aa8.51□□□□□ -1.05
USP28-205ENST00000537706 NIPA2Q8N8Q9 360 aa8.51□□□□□ -1.05
USP28-205ENST00000537706 ZNF441Q8N8Z8 693 aa8.51□□□□□ -1.05
USP28-205ENST00000537706 OR9A4Q8NGU2 314 aa8.51□□□□□ -1.05
USP28-205ENST00000537706 ASB15Q8WXK1 588 aa8.51□□□□□ -1.05
USP28-205ENST00000537706 SYN2Q92777 582 aaPredicted RBP8.51□□□□□ -1.05
USP28-205ENST00000537706 IQCDQ96DY2 449 aa8.51□□□□□ -1.05
USP28-205ENST00000537706 TEKT5Q96M29 485 aa8.51□□□□□ -1.05
USP28-205ENST00000537706 C19orf43Q9BQ61 176 aa8.51□□□□□ -1.05
USP28-205ENST00000537706 MAK16Q9BXY0 300 aaKnown RBP8.51□□□□□ -1.05
USP28-205ENST00000537706 ZNF701Q9NV72 531 aaPredicted RBP8.51□□□□□ -1.05
USP28-205ENST00000537706 C6orf203Q9P0P8 240 aaPredicted RBP8.51□□□□□ -1.05
USP28-205ENST00000537706 HCN3Q9P1Z3 774 aa8.51□□□□□ -1.05
USP28-205ENST00000537706 YARS2Q9Y2Z4 477 aaKnown RBP8.51□□□□□ -1.05
USP28-205ENST00000537706 EZRP15311 586 aaKnown RBP8.5□□□□□ -1.05
USP28-205ENST00000537706 ZFXP17010 805 aaPredicted RBP8.5□□□□□ -1.05
USP28-205ENST00000537706 JAK1P23458 1154 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 PSMB5P28074 263 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 ARHGAP25P42331 645 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 CLCN2P51788 898 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 DIO3P55073 304 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 ADARP55265 1226 aaKnown RBP8.5□□□□□ -1.05
USP28-205ENST00000537706 SUSD1Q6UWL2 747 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 KIAA0408Q6ZU52 694 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 PM20D2Q8IYS1 436 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 ARMC10Q8N2F6 343 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 CLDN19Q8N6F1 224 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 NAXEQ8NCW5 288 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 MAGEC3Q8TD91 643 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 MRGPRX2Q96LB1 330 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 OR1F2PQ96R84 312 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 TTC1Q99614 292 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 DNAJC7Q99615 494 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 L2HGDHQ9H9P8 463 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 ANKHQ9HCJ1 492 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 DEPPQ9NTK1 212 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 PSD3Q9NYI0 1048 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 CIDEBQ9UHD4 219 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 TESMINQ9Y4I5 508 aa8.5□□□□□ -1.05
USP28-205ENST00000537706 TLN2Q9Y4G6 2542 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms