RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 NHLRC3Q5JS37 347 aa3.48□□□□□ -1.85
CCDC7-208ENST00000537047 EMBQ6PCB8 327 aa3.48□□□□□ -1.85
CCDC7-208ENST00000537047 IGFL3Q6UXB1 125 aa3.48□□□□□ -1.85
CCDC7-208ENST00000537047 ANKRD13CQ8N6S4 541 aa3.48□□□□□ -1.85
CCDC7-208ENST00000537047 PRPF31Q8WWY3 499 aaKnown RBP3.48□□□□□ -1.85
CCDC7-208ENST00000537047 ATL1Q8WXF7 558 aa3.48□□□□□ -1.85
CCDC7-208ENST00000537047 RANBP9Q96S59 729 aa3.48□□□□□ -1.85
CCDC7-208ENST00000537047 FEVQ99581 238 aa3.48□□□□□ -1.85
CCDC7-208ENST00000537047 ANKZF1Q9H8Y5 726 aa3.48□□□□□ -1.85
CCDC7-208ENST00000537047 GIMAP4Q9NUV9 329 aa3.48□□□□□ -1.85
CCDC7-208ENST00000537047 Q9UF83 564 aa3.48□□□□□ -1.85
CCDC7-208ENST00000537047 TMEM5Q9Y2B1 443 aa3.48□□□□□ -1.85
CCDC7-208ENST00000537047 SALL1Q9NSC2 1324 aa3.47□□□□□ -1.85
CCDC7-208ENST00000537047 hCG_38984A0A1B0GV85 526 aa3.47□□□□□ -1.85
CCDC7-208ENST00000537047 hCG_1807616A0A1W2PRN6 198 aa3.47□□□□□ -1.85
CCDC7-208ENST00000537047 RNF103O00237 685 aa3.47□□□□□ -1.85
CCDC7-208ENST00000537047 MTRF1O75570 445 aaKnown RBP3.47□□□□□ -1.85
CCDC7-208ENST00000537047 RPS6KA5O75582 802 aa3.47□□□□□ -1.85
CCDC7-208ENST00000537047 SERPING1P05155 500 aa3.47□□□□□ -1.85
CCDC7-208ENST00000537047 ANPEPP15144 967 aa3.47□□□□□ -1.85
CCDC7-208ENST00000537047 RIDAP52758 137 aaKnown RBP3.47□□□□□ -1.85
CCDC7-208ENST00000537047 CUL4AQ13619 759 aa3.47□□□□□ -1.85
CCDC7-208ENST00000537047 FAM205BPQ63HN1 556 aa3.47□□□□□ -1.85
CCDC7-208ENST00000537047 OLFML2AQ68BL7 652 aa3.47□□□□□ -1.85
CCDC7-208ENST00000537047 TMUB2Q71RG4 321 aa3.47□□□□□ -1.85
CCDC7-208ENST00000537047 C5orf24Q7Z6I8 188 aa3.47□□□□□ -1.85
CCDC7-208ENST00000537047 TEKT4Q8WW24 435 aa3.47□□□□□ -1.85
CCDC7-208ENST00000537047 ESAMQ96AP7 390 aa3.47□□□□□ -1.85
CCDC7-208ENST00000537047 OTUB1Q96FW1 271 aaPredicted RBP3.47□□□□□ -1.85
CCDC7-208ENST00000537047 RSRC1Q96IZ7 334 aaKnown RBP3.47□□□□□ -1.85
CCDC7-208ENST00000537047 ABHD1Q96SE0 405 aa3.47□□□□□ -1.85
CCDC7-208ENST00000537047 NOL11Q9H8H0 719 aaKnown RBP3.47□□□□□ -1.85
CCDC7-208ENST00000537047 TBC1D29Q9UFV1 150 aa3.47□□□□□ -1.85
CCDC7-208ENST00000537047 AUP1Q9Y679 476 aa3.47□□□□□ -1.85
CCDC7-208ENST00000537047 HDAC3O15379 428 aa3.46□□□□□ -1.86
CCDC7-208ENST00000537047 ZNF253O75346 499 aa3.46□□□□□ -1.86
CCDC7-208ENST00000537047 SAGP10523 405 aaPredicted RBP3.46□□□□□ -1.86
CCDC7-208ENST00000537047 KNOP1Q1ED39 458 aaKnown RBP3.46□□□□□ -1.86
CCDC7-208ENST00000537047 TIMM50Q3ZCQ8 353 aa3.46□□□□□ -1.86
CCDC7-208ENST00000537047 FGD3Q5JSP0 725 aa3.46□□□□□ -1.86
CCDC7-208ENST00000537047 ZNF506Q5JVG8 444 aa3.46□□□□□ -1.86
CCDC7-208ENST00000537047 LINC00242Q5T6M2 205 aa3.46□□□□□ -1.86
CCDC7-208ENST00000537047 SLC4A11Q8NBS3 891 aa3.46□□□□□ -1.86
CCDC7-208ENST00000537047 NSUN4Q96CB9 384 aaKnown RBP3.46□□□□□ -1.86
CCDC7-208ENST00000537047 MRPL1Q9BYD6 325 aaKnown RBP3.46□□□□□ -1.86
CCDC7-208ENST00000537047 TMX4Q9H1E5 349 aaPredicted RBP3.46□□□□□ -1.86
CCDC7-208ENST00000537047 MOB1AQ9H8S9 216 aa3.46□□□□□ -1.86
CCDC7-208ENST00000537047 PDE7BQ9NP56 450 aa3.46□□□□□ -1.86
CCDC7-208ENST00000537047 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.46□□□□□ -1.863e-7■■■■■ 29.4
CCDC7-208ENST00000537047 MRPL15Q9P015 296 aaKnown RBP3.46□□□□□ -1.86
CCDC7-208ENST00000537047 DHRS4-AS1Q9P1J3 65 aa3.46□□□□□ -1.86
CCDC7-208ENST00000537047 PPIEQ9UNP9 301 aaKnown RBP3.46□□□□□ -1.86
CCDC7-208ENST00000537047 NPHP3Q7Z494 1330 aa3.45□□□□□ -1.86
CCDC7-208ENST00000537047 TRAV24A0A0B4J272 114 aa3.45□□□□□ -1.86
CCDC7-208ENST00000537047 ATP5BP06576 529 aaKnown RBP3.45□□□□□ -1.86
CCDC7-208ENST00000537047 CD1DP15813 335 aa3.45□□□□□ -1.86
CCDC7-208ENST00000537047 EIF2DP41214 584 aaKnown RBP3.45□□□□□ -1.86
CCDC7-208ENST00000537047 IL11RAQ14626 422 aa3.45□□□□□ -1.86
CCDC7-208ENST00000537047 SPANXN4Q5MJ08 99 aa3.45□□□□□ -1.86
CCDC7-208ENST00000537047 HYIQ5T013 277 aa3.45□□□□□ -1.86
CCDC7-208ENST00000537047 MARC1Q5VT66 337 aa3.45□□□□□ -1.86
CCDC7-208ENST00000537047 ZBTB49Q6ZSB9 765 aa3.45□□□□□ -1.86
CCDC7-208ENST00000537047 MCM10Q7L590 875 aa3.45□□□□□ -1.86
CCDC7-208ENST00000537047 OR6T1Q8NGN1 323 aa3.45□□□□□ -1.86
CCDC7-208ENST00000537047 CASP10Q92851 521 aa3.45□□□□□ -1.86
CCDC7-208ENST00000537047 MUS81Q96NY9 551 aa3.45□□□□□ -1.86
CCDC7-208ENST00000537047 GPR88Q9GZN0 384 aa3.45□□□□□ -1.86
CCDC7-208ENST00000537047 SDCBP2Q9H190 292 aa3.45□□□□□ -1.86
CCDC7-208ENST00000537047 MARCH7Q9H992 704 aa3.45□□□□□ -1.86
CCDC7-208ENST00000537047 NSMCE4AQ9NXX6 385 aa3.45□□□□□ -1.86
CCDC7-208ENST00000537047 CPSF2Q9P2I0 782 aaKnown RBP3.45□□□□□ -1.86
CCDC7-208ENST00000537047 IL36AQ9UHA7 158 aa3.45□□□□□ -1.86
CCDC7-208ENST00000537047 DDX25Q9UHL0 483 aaKnown RBP3.45□□□□□ -1.86
CCDC7-208ENST00000537047 GTF3C4Q9UKN8 822 aa3.45□□□□□ -1.86
CCDC7-208ENST00000537047 PCDHGB4Q9UN71 923 aa3.45□□□□□ -1.86
CCDC7-208ENST00000537047 GPR34Q9UPC5 381 aa3.45□□□□□ -1.86
CCDC7-208ENST00000537047 RSF1Q96T23 1441 aaPredicted RBP3.44□□□□□ -1.86
CCDC7-208ENST00000537047 IQCMA0A1B0GVH7 501 aa3.44□□□□□ -1.86
CCDC7-208ENST00000537047 AP5Z1O43299 807 aa3.44□□□□□ -1.86
CCDC7-208ENST00000537047 TNFSF12O43508 249 aa3.44□□□□□ -1.86
CCDC7-208ENST00000537047 SPRY1O43609 319 aaPredicted RBP3.44□□□□□ -1.86
CCDC7-208ENST00000537047 UMPSP11172 480 aa3.44□□□□□ -1.86
CCDC7-208ENST00000537047 CD59P13987 128 aa3.44□□□□□ -1.86
CCDC7-208ENST00000537047 ASCL1P50553 236 aa3.44□□□□□ -1.86
CCDC7-208ENST00000537047 EIF5P55010 431 aaKnown RBP3.44□□□□□ -1.86
CCDC7-208ENST00000537047 UBASH3AP57075 661 aa3.44□□□□□ -1.86
CCDC7-208ENST00000537047 LTB4RQ15722 352 aa3.44□□□□□ -1.86
CCDC7-208ENST00000537047 MEA1Q16626 185 aa3.44□□□□□ -1.86
CCDC7-208ENST00000537047 SLC22A6Q4U2R8 563 aa3.44□□□□□ -1.86
CCDC7-208ENST00000537047 CAMKMTQ7Z624 323 aa3.44□□□□□ -1.86
CCDC7-208ENST00000537047 OR5M9Q8NGP3 310 aa3.44□□□□□ -1.86
CCDC7-208ENST00000537047 STRADBQ9C0K7 418 aa3.44□□□□□ -1.86
CCDC7-208ENST00000537047 CCDC68Q9H2F9 335 aa3.44□□□□□ -1.86
CCDC7-208ENST00000537047 RIMS4Q9H426 269 aaPredicted RBP3.44□□□□□ -1.86
CCDC7-208ENST00000537047 ACTL8Q9H568 366 aa3.44□□□□□ -1.86
CCDC7-208ENST00000537047 TXNDC16Q9P2K2 825 aa3.44□□□□□ -1.86
CCDC7-208ENST00000537047 CHORDC1Q9UHD1 332 aaPredicted RBP3.44□□□□□ -1.86
CCDC7-208ENST00000537047 FBXL4Q9UKA2 621 aa3.44□□□□□ -1.86
CCDC7-208ENST00000537047 A8MVM7 634 aa3.43□□□□□ -1.86
CCDC7-208ENST00000537047 C17orf105B2RV13 164 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms