RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 ROPN1Q9HAT0 212 aaPredicted RBP16.98■□□□□ 0.31
DDX55-204ENST00000536079 ZNF304Q9HCX3 659 aa16.98■□□□□ 0.31
DDX55-204ENST00000536079 DCDC2Q9UHG0 476 aa16.98■□□□□ 0.31
DDX55-204ENST00000536079 CDC14CA4D256 554 aa16.97■□□□□ 0.31
DDX55-204ENST00000536079 VSTM2BA6NLU5 285 aa16.97■□□□□ 0.31
DDX55-204ENST00000536079 C9J4A7 227 aa16.97■□□□□ 0.31
DDX55-204ENST00000536079 G3V2L1 256 aa16.97■□□□□ 0.31
DDX55-204ENST00000536079 TXNDC9O14530 226 aa16.97■□□□□ 0.31
DDX55-204ENST00000536079 PROCP04070 461 aa16.97■□□□□ 0.31
DDX55-204ENST00000536079 TUBBP07437 444 aa16.97■□□□□ 0.31
DDX55-204ENST00000536079 RPS17P08708 135 aaKnown RBP16.97■□□□□ 0.31
DDX55-204ENST00000536079 ZNF888P0CJ79 500 aaPredicted RBP16.97■□□□□ 0.31
DDX55-204ENST00000536079 CRHR1P34998 444 aa16.97■□□□□ 0.31
DDX55-204ENST00000536079 EFNA3P52797 238 aa16.97■□□□□ 0.31
DDX55-204ENST00000536079 PWP1Q13610 501 aa16.97■□□□□ 0.31
DDX55-204ENST00000536079 FAM53BQ14153 422 aa16.97■□□□□ 0.31
DDX55-204ENST00000536079 NKG7Q16617 165 aa16.97■□□□□ 0.31
DDX55-204ENST00000536079 LINC00303Q3SY05 128 aa16.97■□□□□ 0.31
DDX55-204ENST00000536079 UNC50Q53HI1 259 aa16.97■□□□□ 0.31
DDX55-204ENST00000536079 VWA2Q5GFL6 755 aa16.97■□□□□ 0.31
DDX55-204ENST00000536079 BEND6Q5SZJ8 279 aaPredicted RBP16.97■□□□□ 0.31
DDX55-204ENST00000536079 LAPTM4BQ86VI4 370 aa16.97■□□□□ 0.31
DDX55-204ENST00000536079 AFAP1L2Q8N4X5 818 aa16.97■□□□□ 0.31
DDX55-204ENST00000536079 OR52B6Q8NGF0 335 aa16.97■□□□□ 0.31
DDX55-204ENST00000536079 ADAMTS17Q8TE56 1095 aa16.97■□□□□ 0.31
DDX55-204ENST00000536079 UTP15Q8TED0 518 aaKnown RBP16.97■□□□□ 0.31
DDX55-204ENST00000536079 ZNF483Q8TF39 744 aaPredicted RBP16.97■□□□□ 0.31
DDX55-204ENST00000536079 TTC9Q92623 222 aa16.97■□□□□ 0.31
DDX55-204ENST00000536079 SPSB2Q99619 263 aa16.97■□□□□ 0.31
DDX55-204ENST00000536079 SOX17Q9H6I2 414 aaPredicted RBP16.97■□□□□ 0.31
DDX55-204ENST00000536079 NT5DC2Q9H857 520 aa16.97■□□□□ 0.31
DDX55-204ENST00000536079 NOL11Q9H8H0 719 aaKnown RBP16.97■□□□□ 0.31
DDX55-204ENST00000536079 IPPKQ9H8X2 491 aa16.97■□□□□ 0.31
DDX55-204ENST00000536079 GPN3Q9UHW5 284 aaPredicted RBP16.97■□□□□ 0.31
DDX55-204ENST00000536079 RNF11Q9Y3C5 154 aa16.97■□□□□ 0.31
DDX55-204ENST00000536079 PTRH2Q9Y3E5 179 aaKnown RBP16.97■□□□□ 0.31
DDX55-204ENST00000536079 ATMQ13315 3056 aa16.96■□□□□ 0.31
DDX55-204ENST00000536079 ZNF860A6NHJ4 632 aa16.96■□□□□ 0.31
DDX55-204ENST00000536079 GLRA3O75311 464 aa16.96■□□□□ 0.31
DDX55-204ENST00000536079 SMIM10L1P0DMW3 83 aa16.96■□□□□ 0.31
DDX55-204ENST00000536079 FBLP22087 321 aaKnown RBP16.96■□□□□ 0.31
DDX55-204ENST00000536079 HNRNPH1P31943 449 aaKnown RBP16.96■□□□□ 0.31
DDX55-204ENST00000536079 CDH13P55290 713 aa16.96■□□□□ 0.31
DDX55-204ENST00000536079 TBR1Q16650 682 aa16.96■□□□□ 0.31
DDX55-204ENST00000536079 UGT8Q16880 541 aa16.96■□□□□ 0.31
DDX55-204ENST00000536079 DEFB109BQ30KR1 87 aa16.96■□□□□ 0.31
DDX55-204ENST00000536079 TOR1AIP1Q5JTV8 583 aa16.96■□□□□ 0.31
DDX55-204ENST00000536079 PRMT9Q6P2P2 845 aa16.96■□□□□ 0.31
DDX55-204ENST00000536079 SYVN1Q86TM6 617 aa16.96■□□□□ 0.31
DDX55-204ENST00000536079 LCA5Q86VQ0 697 aa16.96■□□□□ 0.31
DDX55-204ENST00000536079 PRSS58Q8IYP2 241 aa16.96■□□□□ 0.31
DDX55-204ENST00000536079 KRT78Q8N1N4 520 aa16.96■□□□□ 0.31
DDX55-204ENST00000536079 RIBC1Q8N443 379 aaPredicted RBP16.96■□□□□ 0.31
DDX55-204ENST00000536079 ZSCAN1Q8NBB4 408 aa16.96■□□□□ 0.31
DDX55-204ENST00000536079 OR5T3Q8NGG3 340 aa16.96■□□□□ 0.31
DDX55-204ENST00000536079 EXTL1Q92935 676 aa16.96■□□□□ 0.31
DDX55-204ENST00000536079 FKBP10Q96AY3 582 aa16.96■□□□□ 0.31
DDX55-204ENST00000536079 SMIM10Q96HG1 83 aa16.96■□□□□ 0.31
DDX55-204ENST00000536079 TMEM237Q96Q45 408 aa16.96■□□□□ 0.31
DDX55-204ENST00000536079 EFCAB11Q9BUY7 163 aa16.96■□□□□ 0.31
DDX55-204ENST00000536079 SLC26A1Q9H2B4 701 aa16.96■□□□□ 0.31
DDX55-204ENST00000536079 TMCO1Q9UM00 188 aa16.96■□□□□ 0.31
DDX55-204ENST00000536079 NAALAD2Q9Y3Q0 740 aa16.96■□□□□ 0.31
DDX55-204ENST00000536079 ANGPTL3Q9Y5C1 460 aa16.96■□□□□ 0.31
DDX55-204ENST00000536079 TNPO3Q9Y5L0 923 aaKnown RBP16.96■□□□□ 0.31
DDX55-204ENST00000536079 MASP2O00187 686 aa16.95■□□□□ 0.3
DDX55-204ENST00000536079 PLIN3O60664 434 aa16.95■□□□□ 0.3
DDX55-204ENST00000536079 RDH16O75452 317 aa16.95■□□□□ 0.3
DDX55-204ENST00000536079 JRKO75564 520 aa16.95■□□□□ 0.3
DDX55-204ENST00000536079 KLHL18O94889 574 aa16.95■□□□□ 0.3
DDX55-204ENST00000536079 NSA2O95478 260 aaKnown RBP16.95■□□□□ 0.3
DDX55-204ENST00000536079 SLC35G6P0C7Q6 338 aa16.95■□□□□ 0.3
DDX55-204ENST00000536079 ATP5F1P24539 256 aaPredicted RBP16.95■□□□□ 0.3
DDX55-204ENST00000536079 CXCR2P25025 360 aa16.95■□□□□ 0.3
DDX55-204ENST00000536079 PIK3CGP48736 1102 aa16.95■□□□□ 0.3
DDX55-204ENST00000536079 RAB8AP61006 207 aa16.95■□□□□ 0.3
DDX55-204ENST00000536079 OLR1P78380 273 aa16.95■□□□□ 0.3
DDX55-204ENST00000536079 TRAF3Q13114 568 aa16.95■□□□□ 0.3
DDX55-204ENST00000536079 DSG2Q14126 1118 aa16.95■□□□□ 0.3
DDX55-204ENST00000536079 NDUFA9Q16795 377 aa16.95■□□□□ 0.3
DDX55-204ENST00000536079 DEFB134Q4QY38 66 aa16.95■□□□□ 0.3
DDX55-204ENST00000536079 ZNF678Q5SXM1 525 aa16.95■□□□□ 0.3
DDX55-204ENST00000536079 GRHL2Q6ISB3 625 aa16.95■□□□□ 0.3
DDX55-204ENST00000536079 SRRM1Q8IYB3 904 aaKnown RBP16.95■□□□□ 0.3
DDX55-204ENST00000536079 TBC1D19Q8N5T2 526 aa16.95■□□□□ 0.3
DDX55-204ENST00000536079 BANPQ8N9N5 519 aa16.95■□□□□ 0.3
DDX55-204ENST00000536079 TRPV3Q8NET8 790 aa16.95■□□□□ 0.3
DDX55-204ENST00000536079 CCT6BQ92526 530 aa16.95■□□□□ 0.3
DDX55-204ENST00000536079 MVB12AQ96EY5 273 aa16.95■□□□□ 0.3
DDX55-204ENST00000536079 C1QTNF3Q9BXJ4 246 aa16.95■□□□□ 0.3
DDX55-204ENST00000536079 RHBGQ9H310 441 aa16.95■□□□□ 0.3
DDX55-204ENST00000536079 SEMA4BQ9NPR2 832 aaPredicted RBP16.95■□□□□ 0.3
DDX55-204ENST00000536079 HCN3Q9P1Z3 774 aa16.95■□□□□ 0.3
DDX55-204ENST00000536079 TRPC4Q9UBN4 977 aa16.95■□□□□ 0.3
DDX55-204ENST00000536079 ZNF225Q9UK10 706 aa16.95■□□□□ 0.3
DDX55-204ENST00000536079 SLC22A7Q9Y694 548 aa16.95■□□□□ 0.3
DDX55-204ENST00000536079 CCDC88CQ9P219 2028 aa16.94■□□□□ 0.3
DDX55-204ENST00000536079 IGLV3-12A0A075B6K2 115 aa16.94■□□□□ 0.3
DDX55-204ENST00000536079 A0A0G2JN53 185 aa16.94■□□□□ 0.3
DDX55-204ENST00000536079 LRIT2A6NDA9 550 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms