RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 GHDCQ8N2G8 530 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 GPATCH11Q8N954 259 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 NFAM1Q8NET5 270 aaPredicted RBP10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 TRIM58Q8NG06 486 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 OR56A3Q8NH54 315 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 C16orf52Q8NHV5 167 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 NT5CQ8TCD5 201 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 SLC13A3Q8WWT9 602 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 TBC1D20Q96BZ9 403 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 MTFMTQ96DP5 389 aaKnown RBP10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 SMIM10Q96HG1 83 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 SEC16BQ96JE7 1060 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 SERPINB12Q96P63 405 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 SIGLEC12Q96PQ1 595 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 GPR21Q99679 349 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 HAUS8Q9BT25 410 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 AARSD1Q9BTE6 412 aaKnown RBP10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 ANKHQ9HCJ1 492 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 RYDENQ9NUL5 291 aaKnown RBP10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 FBXO5Q9UKT4 447 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 GUCA1BQ9UMX6 200 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 PDE10AQ9Y233 779 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 INTS1Q8N201 2190 aaKnown RBP10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 TCRBV16S1A1N1A0A5B0 115 aa10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 LCMT2O60294 686 aaKnown RBP10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 FHP07954 510 aa10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 ENO2P09104 434 aaPredicted RBP10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 SLC35G6P0C7Q6 338 aa10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 JAK1P23458 1154 aa10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 GRK3P35626 688 aa10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 SLC1A2P43004 574 aa10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 KCNJ1P48048 391 aa10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 MLF1P58340 268 aa10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 CBLBQ13191 982 aa10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 CTBP1Q13363 440 aa10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 ABRAXAS2Q15018 415 aa10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 DUPD1Q68J44 220 aa10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 FAAH2Q6GMR7 532 aa10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 PAPD4Q6PIY7 484 aaKnown RBP10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 AGTRAPQ6RW13 159 aa10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 UBE2R2Q712K3 238 aaPredicted RBP10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 SLC26A11Q86WA9 606 aa10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 C17orf64Q86WR6 236 aa10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 RPS19BP1Q86WX3 136 aaKnown RBP10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 DOLPP1Q86YN1 238 aa10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 AGGF1Q8N302 714 aaeCLIP10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 NAT8LQ8N9F0 302 aa10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 KCT2Q8NC54 265 aa10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 C2CD4AQ8NCU7 369 aaPredicted RBP10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 PPFIBP2Q8ND30 876 aa10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 FAM167BQ9BTA0 163 aa10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 NAT9Q9BTE0 207 aa10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 CCDC68Q9H2F9 335 aa10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 SAMD15Q9P1V8 674 aa10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 ACANP16112 2415 aa10.53□□□□□ -0.72
CLSTN3-206ENST00000535668 ZNF407Q9C0G0 2248 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 TRBC2A0A5B9 178 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 FEZF1A0PJY2 475 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 GABRR3A8MPY1 467 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 FFAR3O14843 346 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 GPR42O15529 346 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 HAUS5O94927 633 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 TTC4O95801 387 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 ALOX12P18054 663 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 IL1RNP18510 177 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 KIR3DL1P43629 444 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 SCTRP47872 440 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 RGS4P49798 205 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 HLCSP50747 726 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 GPR143P51810 404 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 TAS2R50P59544 299 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 ALDH6A1Q02252 535 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 DHX9Q08211 1270 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 THOC5Q13769 683 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 FRG1Q14331 258 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 CDSNQ15517 529 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 MINDY4Q4G0A6 757 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 SFT2D3Q587I9 215 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 ANKRD22Q5VYY1 191 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 SPINK14Q6IE38 97 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 GSTA5Q7RTV2 222 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 PIWIL4Q7Z3Z4 852 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 FGD2Q7Z6J4 655 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 PLD3Q8IV08 490 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 SHISA5Q8N114 240 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 OTUD6BQ8N6M0 293 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 ZFP62Q8NB50 900 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 FAM98AQ8NCA5 519 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 MAGED4Q96JG8 741 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 YIPF2Q9BWQ6 316 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 SLC6A16Q9GZN6 736 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 KCNK13Q9HB14 408 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 MCCC2Q9HCC0 563 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 TAS2R13Q9NYV9 303 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 ZFP69BQ9UJL9 534 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 TINAGQ9UJW2 476 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 CORO1CQ9ULV4 474 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 NAALAD2Q9Y3Q0 740 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 ABCA4P78363 2273 aa10.52□□□□□ -0.73
CLSTN3-206ENST00000535668 SCN3AQ9NY46 2000 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms