RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 RNF149Q8NC42 400 aa6.38□□□□□ -1.39
USP28-202ENST00000535607 SLC22A17Q8WUG5 538 aa6.38□□□□□ -1.39
USP28-202ENST00000535607 TWIST2Q8WVJ9 160 aa6.38□□□□□ -1.39
USP28-202ENST00000535607 FAR1Q8WVX9 515 aa6.38□□□□□ -1.39
USP28-202ENST00000535607 SLC38A4Q969I6 547 aa6.38□□□□□ -1.39
USP28-202ENST00000535607 NTAN1Q96AB6 310 aa6.38□□□□□ -1.39
USP28-202ENST00000535607 SLC47A1Q96FL8 570 aa6.38□□□□□ -1.39
USP28-202ENST00000535607 TNIP3Q96KP6 325 aa6.38□□□□□ -1.39
USP28-202ENST00000535607 TSGA13Q96PP4 275 aa6.38□□□□□ -1.39
USP28-202ENST00000535607 FAM193BQ96PV7 902 aaPredicted RBP6.38□□□□□ -1.39
USP28-202ENST00000535607 ZNF300Q96RE9 604 aaPredicted RBP6.38□□□□□ -1.39
USP28-202ENST00000535607 DPYSL5Q9BPU6 564 aa6.38□□□□□ -1.39
USP28-202ENST00000535607 DHRS9Q9BPW9 319 aa6.38□□□□□ -1.39
USP28-202ENST00000535607 FSD1LQ9BXM9 530 aa6.38□□□□□ -1.39
USP28-202ENST00000535607 ITPAQ9BY32 194 aa6.38□□□□□ -1.39
USP28-202ENST00000535607 NUAK2Q9H093 628 aa6.38□□□□□ -1.39
USP28-202ENST00000535607 DCSTAMPQ9H295 470 aa6.38□□□□□ -1.39
USP28-202ENST00000535607 FZD8Q9H461 694 aa6.38□□□□□ -1.39
USP28-202ENST00000535607 SYNDIG1Q9H7V2 258 aa6.38□□□□□ -1.39
USP28-202ENST00000535607 SYTL2Q9HCH5 934 aa6.38□□□□□ -1.39
USP28-202ENST00000535607 DYRK4Q9NR20 520 aa6.38□□□□□ -1.39
USP28-202ENST00000535607 CHST12Q9NRB3 414 aa6.38□□□□□ -1.39
USP28-202ENST00000535607 DPP3Q9NY33 737 aa6.38□□□□□ -1.39
USP28-202ENST00000535607 FBXO5Q9UKT4 447 aa6.38□□□□□ -1.39
USP28-202ENST00000535607 INTS6Q9UL03 887 aaKnown RBP6.38□□□□□ -1.39
USP28-202ENST00000535607 IPPQ9Y573 584 aa6.38□□□□□ -1.39
USP28-202ENST00000535607 ANK1P16157 1881 aa6.38□□□□□ -1.39
USP28-202ENST00000535607 DNAH12Q6ZR08 3092 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 LACTBL1A8MY62 500 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 INO80B-WBP1J3KQ70 363 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 DCLK1O15075 740 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 HOXC11O43248 304 aaPredicted RBP6.37□□□□□ -1.39
USP28-202ENST00000535607 AIREO43918 545 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 HS6ST1O60243 411 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 HUS1O60921 280 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 UGT2B17O75795 530 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 TPPPO94811 219 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 INMTO95050 263 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 PAPSS2O95340 614 aaPredicted RBP6.37□□□□□ -1.39
USP28-202ENST00000535607 CNOT4O95628 575 aaKnown RBP6.37□□□□□ -1.39
USP28-202ENST00000535607 FYNP06241 537 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 GJB1P08034 283 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 STAG3L1P0CL83 205 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 CD36P16671 472 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 ITGA2P17301 1181 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 GGT1P19440 569 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 CXCR2P25025 360 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 ERP29P30040 261 aaKnown RBP6.37□□□□□ -1.39
USP28-202ENST00000535607 AKT1P31749 480 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 SHMT2P34897 504 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 RCVRNP35243 200 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 ARL1P40616 181 aaPredicted RBP6.37□□□□□ -1.39
USP28-202ENST00000535607 PNPLA4P41247 253 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 CCR10P46092 362 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 RPL34P49207 117 aaKnown RBP6.37□□□□□ -1.39
USP28-202ENST00000535607 UGT2B15P54855 530 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 CDH13P55290 713 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 TAS2R39P59534 338 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 ISL1P61371 349 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 ERVK-8P63133 956 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 PPP2R2BQ00005 443 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 BEX3Q00994 111 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 YWHAHQ04917 246 aaPredicted RBP6.37□□□□□ -1.39
USP28-202ENST00000535607 SCAPQ12770 1279 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 LCP2Q13094 533 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 CAPRIN1Q14444 709 aaKnown RBP6.37□□□□□ -1.39
USP28-202ENST00000535607 CLCA4Q14CN2 919 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 ANGPT1Q15389 498 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 NPTX1Q15818 432 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 MEP1AQ16819 746 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 DUSP7Q16829 419 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 FAM187BQ17R55 369 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 ADPRMQ3LIE5 342 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 SMUG1Q53HV7 270 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 ATAT1Q5SQI0 421 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 TPRG1LQ5T0D9 272 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 MARCH8Q5T0T0 291 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 ARMC4Q5T2S8 1044 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 TSTD2Q5T7W7 516 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 FAAH2Q6GMR7 532 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 SULT1C3Q6IMI6 304 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 EFCAB12Q6NXP0 572 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 PMF1Q6P1K2 205 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 CXCL17Q6UXB2 119 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 ZNF517Q6ZMY9 492 aaPredicted RBP6.37□□□□□ -1.39
USP28-202ENST00000535607 CHST15Q7LFX5 561 aaPredicted RBP6.37□□□□□ -1.39
USP28-202ENST00000535607 PIWIL3Q7Z3Z3 882 aaKnown RBP6.37□□□□□ -1.39
USP28-202ENST00000535607 SERINC5Q86VE9 423 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 PLCZ1Q86YW0 608 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 FUNDC1Q8IVP5 155 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 CPNE9Q8IYJ1 553 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 UBQLNLQ8IYU4 475 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 LRRC52Q8N7C0 313 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 RHEBL1Q8TAI7 183 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 C9orf43Q8TAL5 461 aaPredicted RBP6.37□□□□□ -1.39
USP28-202ENST00000535607 NDNFQ8TB73 568 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 HMGCLL1Q8TB92 370 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 DNAJB14Q8TBM8 379 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 NCLNQ969V3 563 aa6.37□□□□□ -1.39
USP28-202ENST00000535607 FAM162AQ96A26 154 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms