RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-205	ENST00000535375		F8VVB4	439 aa		4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375		F8VWA3	439 aa		4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375		G3V2L1	256 aa		4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	TLX2	O43763	284 aa	Predicted RBP	4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	SNAP91	O60641	907 aa		4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	DKC1	O60832	514 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	TBX10	O75333	385 aa		4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	SAP30	O75446	220 aa		4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	RECQL5	O94762	991 aa	Predicted RBP	4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	NXPH4	O95158	308 aa		4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	PENK	P01210	267 aa	Predicted RBP	4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	RPLP0	P05388	317 aa	Known RBP	4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	GPR183	P32249	361 aa		4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	CLCN4	P51793	760 aa		4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	CLDN17	P56750	224 aa		4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	POU5F1	Q01860	360 aa	Known RBP	4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	ZFP36L1	Q07352	338 aa	Known RBP	4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	FAM174B	Q3ZCQ3	159 aa		4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	KRBOX4	Q5JUW0	171 aa		4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	MACC1	Q6ZN28	852 aa		4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	CCDC186	Q7Z3E2	898 aa		4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	SLC22A15	Q8IZD6	547 aa		4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	CCDC191	Q8NCU4	936 aa		4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	P2RX5	Q93086	422 aa		4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	ZNF577	Q9BSK1	485 aa		4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	ANKRD2	Q9GZV1	360 aa		4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	GNB4	Q9HAV0	340 aa		4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	PFDN4	Q9NQP4	134 aa		4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	EXOC1	Q9NV70	894 aa		4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	GPR83	Q9NYM4	423 aa		4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	TP53TG3	Q9ULZ0	132 aa		4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	PLCL2	Q9UPR0	1127 aa		4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	CCL27	Q9Y4X3	112 aa		4.1	□□□□□ -1.75
PRKDC-205	ENST00000535375	NKX6-3	A6NJ46	265 aa		4.09	□□□□□ -1.75
PRKDC-205	ENST00000535375	TMEM150C	B9EJG8	249 aa		4.09	□□□□□ -1.75
PRKDC-205	ENST00000535375	RTCA	O00442	366 aa	Known RBP	4.09	□□□□□ -1.75
PRKDC-205	ENST00000535375	MAGEB2	O15479	319 aa		4.09	□□□□□ -1.75
PRKDC-205	ENST00000535375	HOXD4	P09016	255 aa	Predicted RBP	4.09	□□□□□ -1.75
PRKDC-205	ENST00000535375	GIF	P27352	417 aa		4.09	□□□□□ -1.75
PRKDC-205	ENST00000535375	NDST2	P52849	883 aa		4.09	□□□□□ -1.75
PRKDC-205	ENST00000535375	LIMK2	P53671	638 aa		4.09	□□□□□ -1.75
PRKDC-205	ENST00000535375	MFAP3	P55082	362 aa		4.09	□□□□□ -1.75
PRKDC-205	ENST00000535375	FKBP3	Q00688	224 aa	Known RBP	4.09	□□□□□ -1.75
PRKDC-205	ENST00000535375	IL10RB	Q08334	325 aa		4.09	□□□□□ -1.75
PRKDC-205	ENST00000535375	KIAA0141	Q14154	515 aa	Predicted RBP	4.09	□□□□□ -1.75
PRKDC-205	ENST00000535375	ZNF146	Q15072	292 aa		4.09	□□□□□ -1.75
PRKDC-205	ENST00000535375	SUSD4	Q5VX71	490 aa		4.09	□□□□□ -1.75
PRKDC-205	ENST00000535375	ERN2	Q76MJ5	926 aa	Known RBP	4.09	□□□□□ -1.75
PRKDC-205	ENST00000535375	CATSPER3	Q86XQ3	398 aa		4.09	□□□□□ -1.75
PRKDC-205	ENST00000535375	CROCCP3	Q8IVE0	287 aa		4.09	□□□□□ -1.75
PRKDC-205	ENST00000535375	FAM219A	Q8IW50	185 aa		4.09	□□□□□ -1.75
PRKDC-205	ENST00000535375	LINC00612	Q8N6U2	182 aa		4.09	□□□□□ -1.75
PRKDC-205	ENST00000535375	CCDC185	Q8N715	623 aa		4.09	□□□□□ -1.75
PRKDC-205	ENST00000535375	IQUB	Q8NA54	791 aa		4.09	□□□□□ -1.75
PRKDC-205	ENST00000535375	CASP10	Q92851	521 aa		4.09	□□□□□ -1.75
PRKDC-205	ENST00000535375	RBM41	Q96IZ5	413 aa	Known RBP	4.09	□□□□□ -1.75
PRKDC-205	ENST00000535375	UBAC1	Q9BSL1	405 aa		4.09	□□□□□ -1.75
PRKDC-205	ENST00000535375	LIPG	Q9Y5X9	500 aa		4.09	□□□□□ -1.75
PRKDC-205	ENST00000535375	PDHX	O00330	501 aa		4.08	□□□□□ -1.76
PRKDC-205	ENST00000535375	SPP1	P10451	314 aa		4.08	□□□□□ -1.76
PRKDC-205	ENST00000535375	CD59	P13987	128 aa		4.08	□□□□□ -1.76
PRKDC-205	ENST00000535375	C4BPB	P20851	252 aa		4.08	□□□□□ -1.76
PRKDC-205	ENST00000535375	IL4R	P24394	825 aa		4.08	□□□□□ -1.76
PRKDC-205	ENST00000535375	ZFP36L2	P47974	494 aa	Known RBP	4.08	□□□□□ -1.76
PRKDC-205	ENST00000535375	UGCG	Q16739	394 aa		4.08	□□□□□ -1.76
PRKDC-205	ENST00000535375	HYAL4	Q2M3T9	481 aa		4.08	□□□□□ -1.76
PRKDC-205	ENST00000535375	C6orf136	Q5SQH8	315 aa		4.08	□□□□□ -1.76
PRKDC-205	ENST00000535375	FAM182A	Q5T1J6	154 aa		4.08	□□□□□ -1.76
PRKDC-205	ENST00000535375	MOXD1	Q6UVY6	613 aa		4.08	□□□□□ -1.76
PRKDC-205	ENST00000535375	ANKRD33	Q7Z3H0	272 aa		4.08	□□□□□ -1.76
PRKDC-205	ENST00000535375	PRUNE1	Q86TP1	453 aa		4.08	□□□□□ -1.76
PRKDC-205	ENST00000535375	OR9Q2	Q8NGE9	314 aa		4.08	□□□□□ -1.76
PRKDC-205	ENST00000535375	SPPL2A	Q8TCT8	520 aa		4.08	□□□□□ -1.76
PRKDC-205	ENST00000535375	NSMAF	Q92636	917 aa		4.08	□□□□□ -1.76
PRKDC-205	ENST00000535375	AK8	Q96MA6	479 aa		4.08	□□□□□ -1.76
PRKDC-205	ENST00000535375	BAG1	Q99933	345 aa	Predicted RBP	4.08	□□□□□ -1.76
PRKDC-205	ENST00000535375	NACAP1	Q9BZK3	213 aa		4.08	□□□□□ -1.76
PRKDC-205	ENST00000535375	JPT2	Q9H910	190 aa		4.08	□□□□□ -1.76
PRKDC-205	ENST00000535375	RPF1	Q9H9Y2	349 aa	Known RBP	4.08	□□□□□ -1.76
PRKDC-205	ENST00000535375	KLK11	Q9UBX7	282 aa		4.08	□□□□□ -1.76
PRKDC-205	ENST00000535375	CFDP1	Q9UEE9	299 aa	Predicted RBP	4.08	□□□□□ -1.76
PRKDC-205	ENST00000535375	AGTPBP1	Q9UPW5	1226 aa		4.08	□□□□□ -1.76
PRKDC-205	ENST00000535375	RUVBL2	Q9Y230	463 aa	Known RBP	4.08	□□□□□ -1.76
PRKDC-205	ENST00000535375		A0A1W2PRQ8	180 aa		4.07	□□□□□ -1.76
PRKDC-205	ENST00000535375	SERINC4	A6NH21	518 aa		4.07	□□□□□ -1.76
PRKDC-205	ENST00000535375	TSPY2	A6NKD2	308 aa		4.07	□□□□□ -1.76
PRKDC-205	ENST00000535375	SHISA9	B4DS77	424 aa		4.07	□□□□□ -1.76
PRKDC-205	ENST00000535375	TCP10L2	B9ZVM9	353 aa		4.07	□□□□□ -1.76
PRKDC-205	ENST00000535375		H7C0S8	307 aa		4.07	□□□□□ -1.76
PRKDC-205	ENST00000535375	OGT	O15294	1046 aa		4.07	□□□□□ -1.76
PRKDC-205	ENST00000535375	ECE2	O60344	883 aa		4.07	□□□□□ -1.76
PRKDC-205	ENST00000535375	GALR3	O60755	368 aa	Predicted RBP	4.07	□□□□□ -1.76
PRKDC-205	ENST00000535375	PC	P11498	1178 aa	Known RBP	4.07	□□□□□ -1.76
PRKDC-205	ENST00000535375	FDPS	P14324	419 aa	Known RBP	4.07	□□□□□ -1.76
PRKDC-205	ENST00000535375	SSTR1	P30872	391 aa		4.07	□□□□□ -1.76
PRKDC-205	ENST00000535375	DUT	P33316	252 aa	Known RBP	4.07	□□□□□ -1.76
PRKDC-205	ENST00000535375	ETV5	P41161	510 aa		4.07	□□□□□ -1.76
PRKDC-205	ENST00000535375	C15orf32	Q32M92	178 aa		4.07	□□□□□ -1.76
PRKDC-205	ENST00000535375	FAM166A	Q6J272	317 aa		4.07	□□□□□ -1.76
PRKDC-205	ENST00000535375	HPS6	Q86YV9	775 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms