RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 ENO2P09104 434 aaPredicted RBP16.81■□□□□ 0.28
SMG1-203ENST00000532700 CCND1P24385 295 aa16.81■□□□□ 0.28
SMG1-203ENST00000532700 AVPR1BP47901 424 aa16.81■□□□□ 0.28
SMG1-203ENST00000532700 CCR8P51685 355 aa16.81■□□□□ 0.28
SMG1-203ENST00000532700 REEP5Q00765 189 aa16.81■□□□□ 0.28
SMG1-203ENST00000532700 EFTUD2Q15029 972 aaKnown RBP eCLIP16.81■□□□□ 0.283e-7■■■■□ 23.2
SMG1-203ENST00000532700 NDUFA9Q16795 377 aa16.81■□□□□ 0.28
SMG1-203ENST00000532700 GLE1Q53GS7 698 aaKnown RBP16.81■□□□□ 0.28
SMG1-203ENST00000532700 PRAMEF9Q5VWM5 478 aa16.81■□□□□ 0.28
SMG1-203ENST00000532700 ISLR2Q6UXK2 745 aa16.81■□□□□ 0.28
SMG1-203ENST00000532700 KBTBD2Q8IY47 623 aa16.81■□□□□ 0.28
SMG1-203ENST00000532700 AFAP1L2Q8N4X5 818 aa16.81■□□□□ 0.28
SMG1-203ENST00000532700 DNAJB14Q8TBM8 379 aa16.81■□□□□ 0.28
SMG1-203ENST00000532700 SLC5A11Q8WWX8 675 aa16.81■□□□□ 0.28
SMG1-203ENST00000532700 TSLPQ969D9 159 aa16.81■□□□□ 0.28
SMG1-203ENST00000532700 THAP11Q96EK4 314 aa16.81■□□□□ 0.28
SMG1-203ENST00000532700 PEX11GQ96HA9 241 aa16.81■□□□□ 0.28
SMG1-203ENST00000532700 TMEM79Q9BSE2 394 aa16.81■□□□□ 0.28
SMG1-203ENST00000532700 HAUS8Q9BT25 410 aa16.81■□□□□ 0.28
SMG1-203ENST00000532700 KLHL31Q9H511 634 aa16.81■□□□□ 0.28
SMG1-203ENST00000532700 SLC22A14Q9Y267 594 aa16.81■□□□□ 0.28
SMG1-203ENST00000532700 TRBC2A0A5B9 178 aa16.8■□□□□ 0.28
SMG1-203ENST00000532700 EIF3HO15372 352 aaKnown RBP eCLIP16.8■□□□□ 0.282e-6■■■□□ 15.5
SMG1-203ENST00000532700 TAPBPO15533 448 aa16.8■□□□□ 0.28
SMG1-203ENST00000532700 MAN1A2O60476 641 aa16.8■□□□□ 0.28
SMG1-203ENST00000532700 SERPINA7P05543 415 aa16.8■□□□□ 0.28
SMG1-203ENST00000532700 ZNF888P0CJ79 500 aaPredicted RBP16.8■□□□□ 0.28
SMG1-203ENST00000532700 C8orf89P0DMQ9 161 aa16.8■□□□□ 0.28
SMG1-203ENST00000532700 SCTRP47872 440 aa16.8■□□□□ 0.28
SMG1-203ENST00000532700 PLTPP55058 493 aa16.8■□□□□ 0.28
SMG1-203ENST00000532700 SLC7A5Q01650 507 aa16.8■□□□□ 0.28
SMG1-203ENST00000532700 RHAGQ02094 409 aa16.8■□□□□ 0.28
SMG1-203ENST00000532700 ZNF169Q14929 603 aaPredicted RBP16.8■□□□□ 0.28
SMG1-203ENST00000532700 MINDY4Q4G0A6 757 aa16.8■□□□□ 0.28
SMG1-203ENST00000532700 DEFB134Q4QY38 66 aa16.8■□□□□ 0.28
SMG1-203ENST00000532700 MFSD4BQ5TF39 518 aa16.8■□□□□ 0.28
SMG1-203ENST00000532700 ADNP2Q6IQ32 1131 aa16.8■□□□□ 0.28
SMG1-203ENST00000532700 ANKRD37Q7Z713 158 aa16.8■□□□□ 0.28
SMG1-203ENST00000532700 TMPRSS11BQ86T26 416 aa16.8■□□□□ 0.28
SMG1-203ENST00000532700 CAMKVQ8NCB2 501 aa16.8■□□□□ 0.28
SMG1-203ENST00000532700 PRR7Q8TB68 274 aa16.8■□□□□ 0.28
SMG1-203ENST00000532700 GRHL3Q8TE85 626 aa16.8■□□□□ 0.28
SMG1-203ENST00000532700 ESAMQ96AP7 390 aa16.8■□□□□ 0.28
SMG1-203ENST00000532700 CYTH2Q99418 400 aa16.8■□□□□ 0.28
SMG1-203ENST00000532700 NPAS2Q99743 824 aa16.8■□□□□ 0.28
SMG1-203ENST00000532700 ANKHQ9HCJ1 492 aa16.8■□□□□ 0.28
SMG1-203ENST00000532700 ERRFI1Q9UJM3 462 aaPredicted RBP16.8■□□□□ 0.28
SMG1-203ENST00000532700 OARD1Q9Y530 152 aa16.8■□□□□ 0.28
SMG1-203ENST00000532700 ASB1Q9Y576 335 aa16.8■□□□□ 0.28
SMG1-203ENST00000532700 COPG1Q9Y678 874 aaKnown RBP16.8■□□□□ 0.28
SMG1-203ENST00000532700 CROCCQ5TZA2 2017 aa16.8■□□□□ 0.28
SMG1-203ENST00000532700 ESYT3A0FGR9 886 aa16.79■□□□□ 0.28
SMG1-203ENST00000532700 NCF1BA6NI72 391 aaPredicted RBP16.79■□□□□ 0.28
SMG1-203ENST00000532700 FAM159BA6NKW6 160 aa16.79■□□□□ 0.28
SMG1-203ENST00000532700 NCF1CA8MVU1 366 aaPredicted RBP16.79■□□□□ 0.28
SMG1-203ENST00000532700 GALR3O60755 368 aaPredicted RBP16.79■□□□□ 0.28
SMG1-203ENST00000532700 WISP2O76076 250 aa16.79■□□□□ 0.28
SMG1-203ENST00000532700 AGFG2O95081 481 aa16.79■□□□□ 0.28
SMG1-203ENST00000532700 SERPIND1P05546 499 aa16.79■□□□□ 0.28
SMG1-203ENST00000532700 NCF1P14598 390 aaPredicted RBP16.79■□□□□ 0.28
SMG1-203ENST00000532700 CXCR2P25025 360 aa16.79■□□□□ 0.28
SMG1-203ENST00000532700 HNF4AP41235 474 aa16.79■□□□□ 0.28
SMG1-203ENST00000532700 SLC6A12P48065 614 aa16.79■□□□□ 0.28
SMG1-203ENST00000532700 OR4D1Q15615 310 aa16.79■□□□□ 0.28
SMG1-203ENST00000532700 FHL5Q5TD97 284 aa16.79■□□□□ 0.28
SMG1-203ENST00000532700 FCRLBQ6BAA4 426 aa16.79■□□□□ 0.28
SMG1-203ENST00000532700 FBXO25Q8TCJ0 367 aa16.79■□□□□ 0.28
SMG1-203ENST00000532700 PYROXD1Q8WU10 500 aa16.79■□□□□ 0.28
SMG1-203ENST00000532700 TM9SF4Q92544 642 aa16.79■□□□□ 0.28
SMG1-203ENST00000532700 RHBDF1Q96CC6 855 aa16.79■□□□□ 0.28
SMG1-203ENST00000532700 TAAR6Q96RI8 345 aa16.79■□□□□ 0.28
SMG1-203ENST00000532700 RBBP8Q99708 897 aa16.79■□□□□ 0.28
SMG1-203ENST00000532700 PHACTR1Q9C0D0 580 aa16.79■□□□□ 0.28
SMG1-203ENST00000532700 GPAMQ9HCL2 828 aa16.79■□□□□ 0.28
SMG1-203ENST00000532700 SLC22A7Q9Y694 548 aa16.79■□□□□ 0.28
SMG1-203ENST00000532700 TBX6O95947 436 aaPredicted RBP16.78■□□□□ 0.28
SMG1-203ENST00000532700 SLC35G6P0C7Q6 338 aa16.78■□□□□ 0.28
SMG1-203ENST00000532700 TSFMP43897 325 aaKnown RBP16.78■□□□□ 0.28
SMG1-203ENST00000532700 KCNC1P48547 511 aa16.78■□□□□ 0.28
SMG1-203ENST00000532700 RAB8AP61006 207 aa16.78■□□□□ 0.28
SMG1-203ENST00000532700 GUCY2DQ02846 1103 aa16.78■□□□□ 0.28
SMG1-203ENST00000532700 DLG1Q12959 904 aa16.78■□□□□ 0.28
SMG1-203ENST00000532700 CDC16Q13042 620 aa16.78■□□□□ 0.28
SMG1-203ENST00000532700 CSHL1Q14406 222 aa16.78■□□□□ 0.28
SMG1-203ENST00000532700 IRAK1BP1Q5VVH5 260 aa16.78■□□□□ 0.28
SMG1-203ENST00000532700 NXPE4Q6UWF7 544 aa16.78■□□□□ 0.28
SMG1-203ENST00000532700 CPEB2Q7Z5Q1 589 aaKnown RBP16.78■□□□□ 0.28
SMG1-203ENST00000532700 NKAPQ8N5F7 415 aaKnown RBP16.78■□□□□ 0.28
SMG1-203ENST00000532700 NT5CQ8TCD5 201 aa16.78■□□□□ 0.28
SMG1-203ENST00000532700 UTP15Q8TED0 518 aaKnown RBP16.78■□□□□ 0.28
SMG1-203ENST00000532700 CREB3L4Q8TEY5 395 aa16.78■□□□□ 0.28
SMG1-203ENST00000532700 GPR22Q99680 433 aa16.78■□□□□ 0.28
SMG1-203ENST00000532700 TRIM54Q9BYV2 358 aa16.78■□□□□ 0.28
SMG1-203ENST00000532700 FAM129AQ9BZQ8 928 aa16.78■□□□□ 0.28
SMG1-203ENST00000532700 EPS8L2Q9H6S3 715 aa16.78■□□□□ 0.28
SMG1-203ENST00000532700 RIC8BQ9NVN3 520 aa16.78■□□□□ 0.28
SMG1-203ENST00000532700 CTNNAL1Q9UBT7 734 aa16.78■□□□□ 0.28
SMG1-203ENST00000532700 ICE1Q9Y2F5 2266 aa16.78■□□□□ 0.28
SMG1-203ENST00000532700 CHST10O43529 356 aa16.77■□□□□ 0.28
SMG1-203ENST00000532700 WDPCPO95876 746 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms