RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 WDR47O94967 919 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 SERPINA7P05543 415 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 UQCRHP07919 91 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 CYC1P08574 325 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 PRR35P0CG20 571 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 NCF1P14598 390 aaPredicted RBP16.29■□□□□ 0.2
PHRF1-204ENST00000532550 GNAZP19086 355 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 IL10P22301 178 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 GNLYP22749 145 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 STX2P32856 288 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 ATP6V0D1P61421 351 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 AP2B1P63010 937 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 TGFBIQ15582 683 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 KBTBD12Q3ZCT8 623 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 PRR30Q53SZ7 412 aaPredicted RBP16.29■□□□□ 0.2
PHRF1-204ENST00000532550 ABHD13Q7L211 337 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 TMPRSS11BQ86T26 416 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 PDSS2Q86YH6 399 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 GPSM1Q86YR5 675 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 TCAIMQ8N3R3 496 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 TRPV3Q8NET8 790 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 FBF1Q8TES7 1133 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 PPP4R1Q8TF05 950 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 ZNF592Q92610 1267 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 RHBDF1Q96CC6 855 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 SNRNP40Q96DI7 357 aaKnown RBP16.29■□□□□ 0.2
PHRF1-204ENST00000532550 MOCOSQ96EN8 888 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 TUBB6Q9BUF5 446 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 CAPS2Q9BXY5 557 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 SLC29A3Q9BZD2 475 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 VN1R1Q9GZP7 353 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 ZNF700Q9H0M5 742 aa16.29■□□□□ 0.2
PHRF1-204ENST00000532550 COPG1Q9Y678 874 aaKnown RBP16.29■□□□□ 0.2
PHRF1-204ENST00000532550 SCN2AQ99250 2005 aa16.28■□□□□ 0.2
PHRF1-204ENST00000532550 WISP3O95389 354 aaPredicted RBP16.28■□□□□ 0.2
PHRF1-204ENST00000532550 C1QAP02745 245 aa16.28■□□□□ 0.2
PHRF1-204ENST00000532550 CD1DP15813 335 aa16.28■□□□□ 0.2
PHRF1-204ENST00000532550 ALOX12P18054 663 aa16.28■□□□□ 0.2
PHRF1-204ENST00000532550 GDF5P43026 501 aa16.28■□□□□ 0.2
PHRF1-204ENST00000532550 RAB10P61026 200 aa16.28■□□□□ 0.2
PHRF1-204ENST00000532550 REEP5Q00765 189 aa16.28■□□□□ 0.2
PHRF1-204ENST00000532550 MFAP5Q13361 173 aa16.28■□□□□ 0.2
PHRF1-204ENST00000532550 PCOLCEQ15113 449 aa16.28■□□□□ 0.2
PHRF1-204ENST00000532550 WHAMMP3Q1A5X7 153 aa16.28■□□□□ 0.2
PHRF1-204ENST00000532550 C18orf21Q32NC0 220 aaPredicted RBP16.28■□□□□ 0.2
PHRF1-204ENST00000532550 CRB2Q5IJ48 1285 aa16.28■□□□□ 0.2
PHRF1-204ENST00000532550 RIPOR1Q6ZS17 1223 aa16.28■□□□□ 0.2
PHRF1-204ENST00000532550 RAPH1Q70E73 1250 aa16.28■□□□□ 0.2
PHRF1-204ENST00000532550 AFAP1L2Q8N4X5 818 aa16.28■□□□□ 0.2
PHRF1-204ENST00000532550 FAM26EQ8N5C1 309 aa16.28■□□□□ 0.2
PHRF1-204ENST00000532550 NT5CQ8TCD5 201 aa16.28■□□□□ 0.2
PHRF1-204ENST00000532550 C19orf60Q96EN9 201 aa16.28■□□□□ 0.2
PHRF1-204ENST00000532550 PEX11GQ96HA9 241 aa16.28■□□□□ 0.2
PHRF1-204ENST00000532550 CNDP1Q96KN2 507 aa16.28■□□□□ 0.2
PHRF1-204ENST00000532550 SPNS1Q9H2V7 528 aa16.28■□□□□ 0.2
PHRF1-204ENST00000532550 CNOT10Q9H9A5 744 aaKnown RBP16.28■□□□□ 0.2
PHRF1-204ENST00000532550 PTGFRNQ9P2B2 879 aa16.28■□□□□ 0.2
PHRF1-204ENST00000532550 ESYT3A0FGR9 886 aa16.27■□□□□ 0.2
PHRF1-204ENST00000532550 ZNF860A6NHJ4 632 aa16.27■□□□□ 0.2
PHRF1-204ENST00000532550 GALR3O60755 368 aaPredicted RBP16.27■□□□□ 0.2
PHRF1-204ENST00000532550 FAM155BO75949 473 aa16.27■□□□□ 0.2
PHRF1-204ENST00000532550 ZNF888P0CJ79 500 aaPredicted RBP16.27■□□□□ 0.2
PHRF1-204ENST00000532550 C1GALT1C1LP0DN25 315 aa16.27■□□□□ 0.2
PHRF1-204ENST00000532550 UQCRFS1P47985 274 aa16.27■□□□□ 0.2
PHRF1-204ENST00000532550 SLC6A12P48065 614 aa16.27■□□□□ 0.2
PHRF1-204ENST00000532550 GUCY2DQ02846 1103 aa16.27■□□□□ 0.2
PHRF1-204ENST00000532550 NAB1Q13506 487 aa16.27■□□□□ 0.2
PHRF1-204ENST00000532550 TLR1Q15399 786 aa16.27■□□□□ 0.2
PHRF1-204ENST00000532550 ZKSCAN8Q15776 578 aaPredicted RBP16.27■□□□□ 0.2
PHRF1-204ENST00000532550 DEFB134Q4QY38 66 aa16.27■□□□□ 0.2
PHRF1-204ENST00000532550 CDKL4Q5MAI5 379 aa16.27■□□□□ 0.2
PHRF1-204ENST00000532550 SULT1C3Q6IMI6 304 aa16.27■□□□□ 0.2
PHRF1-204ENST00000532550 CPEB2Q7Z5Q1 589 aaKnown RBP16.27■□□□□ 0.2
PHRF1-204ENST00000532550 CUZD1Q86UP6 607 aa16.27■□□□□ 0.2
PHRF1-204ENST00000532550 KLHDC8AQ8IYD2 350 aa16.27■□□□□ 0.2
PHRF1-204ENST00000532550 SIRT6Q8N6T7 355 aa16.27■□□□□ 0.2
PHRF1-204ENST00000532550 ANKRD53Q8N9V6 530 aa16.27■□□□□ 0.2
PHRF1-204ENST00000532550 BRIX1Q8TDN6 353 aaKnown RBP16.27■□□□□ 0.2
PHRF1-204ENST00000532550 PSMF1Q92530 271 aa16.27■□□□□ 0.2
PHRF1-204ENST00000532550 OR1F2PQ96R84 312 aa16.27■□□□□ 0.2
PHRF1-204ENST00000532550 ASF1BQ9NVP2 202 aa16.27■□□□□ 0.2
PHRF1-204ENST00000532550 WWOXQ9NZC7 414 aa16.27■□□□□ 0.2
PHRF1-204ENST00000532550 CD274Q9NZQ7 290 aa16.27■□□□□ 0.2
PHRF1-204ENST00000532550 DYTNA2CJ06 578 aa16.26■□□□□ 0.19
PHRF1-204ENST00000532550 OR2W5A6NFC9 320 aa16.26■□□□□ 0.19
PHRF1-204ENST00000532550 TCP11X1B4DZS4 312 aa16.26■□□□□ 0.19
PHRF1-204ENST00000532550 CLGNO14967 610 aa16.26■□□□□ 0.19
PHRF1-204ENST00000532550 S100BP04271 92 aaPredicted RBP16.26■□□□□ 0.19
PHRF1-204ENST00000532550 SERPINA6P08185 405 aa16.26■□□□□ 0.19
PHRF1-204ENST00000532550 CRABP2P29373 138 aa16.26■□□□□ 0.19
PHRF1-204ENST00000532550 GGT5P36269 586 aa16.26■□□□□ 0.19
PHRF1-204ENST00000532550 HNF4AP41235 474 aa16.26■□□□□ 0.19
PHRF1-204ENST00000532550 AGTR2P50052 363 aa16.26■□□□□ 0.19
PHRF1-204ENST00000532550 EFNA3P52797 238 aa16.26■□□□□ 0.19
PHRF1-204ENST00000532550 ARG2P78540 354 aa16.26■□□□□ 0.19
PHRF1-204ENST00000532550 ACTN3Q08043 901 aaPredicted RBP16.26■□□□□ 0.19
PHRF1-204ENST00000532550 CDC16Q13042 620 aa16.26■□□□□ 0.19
PHRF1-204ENST00000532550 SLMAPQ14BN4 828 aa16.26■□□□□ 0.19
PHRF1-204ENST00000532550 SLCO4C1Q6ZQN7 724 aa16.26■□□□□ 0.19
PHRF1-204ENST00000532550 SHISA5Q8N114 240 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms