RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 PLCL2Q9UPR0 1127 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 AP1M2Q9Y6Q5 423 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 NOTCH1P46531 2555 aa8.07□□□□□ -1.12
SSBP3-212ENST00000528930 NUP210LQ5VU65 1888 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 IGKV1-8A0A0C4DH67 115 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 ARGFXA6NJG6 315 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 NDC80O14777 642 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 KCNAB3O43448 404 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 ZBTB14O43829 449 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 TSPAN12O95859 305 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 SLC16A8O95907 504 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 HBQ1P09105 142 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 INHBBP09529 407 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 FDXRP22570 491 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 IMPA1P29218 277 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 HSD17B2P37059 387 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 PNLIPRP1P54315 467 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 RPS15P62841 145 aaKnown RBP8.06□□□□□ -1.12
SSBP3-212ENST00000528930 MGAT5Q09328 741 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 IL10RAQ13651 578 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 PTCHD3Q3KNS1 767 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 HECTD2Q5U5R9 776 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 FAM69BQ5VUD6 431 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 UGT3A1Q6NUS8 523 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 FBXO42Q6P3S6 717 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 TLDC1Q6P9B6 456 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 ZDHHC24Q6UX98 284 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 UBE2R2Q712K3 238 aaPredicted RBP8.06□□□□□ -1.12
SSBP3-212ENST00000528930 SYVN1Q86TM6 617 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 KRTAP19-1Q8IUB9 90 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 ZBED8Q8IZ13 594 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 ZNF655Q8N720 491 aaPredicted RBP8.06□□□□□ -1.12
SSBP3-212ENST00000528930 ENDOVQ8N8Q3 282 aaKnown RBP8.06□□□□□ -1.12
SSBP3-212ENST00000528930 PPFIBP2Q8ND30 876 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 GABPB2Q8TAK5 448 aaPredicted RBP8.06□□□□□ -1.12
SSBP3-212ENST00000528930 ADAMTS17Q8TE56 1095 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 SMPDL3AQ92484 453 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 N4BP2L2Q92802 583 aaPredicted RBP8.06□□□□□ -1.12
SSBP3-212ENST00000528930 TP53INP1Q96A56 240 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 GBP5Q96PP8 586 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 OLFM1Q99784 485 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 DPH2Q9BQC3 489 aaPredicted RBP8.06□□□□□ -1.12
SSBP3-212ENST00000528930 MCMBPQ9BTE3 642 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 ACAT2Q9BWD1 397 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 NLNQ9BYT8 704 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 FAM107BQ9H098 131 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 SYNPO2LQ9H987 977 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 SLC6A20Q9NP91 592 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 PPANQ9NQ55 473 aaKnown RBP8.06□□□□□ -1.12
SSBP3-212ENST00000528930 SMYD2Q9NRG4 433 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 FAM114A2Q9NRY5 505 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 INTS7Q9NVH2 962 aaKnown RBP8.06□□□□□ -1.12
SSBP3-212ENST00000528930 TAS2R13Q9NYV9 303 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 C5AR2Q9P296 337 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 DHCR7Q9UBM7 475 aaKnown RBP8.06□□□□□ -1.12
SSBP3-212ENST00000528930 TRMT6Q9UJA5 497 aaKnown RBP8.06□□□□□ -1.12
SSBP3-212ENST00000528930 CDC23Q9UJX2 597 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 TCFL5Q9UL49 500 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 PDE10AQ9Y233 779 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 VWA7Q9Y334 891 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 PSAT1Q9Y617 370 aa8.06□□□□□ -1.12
SSBP3-212ENST00000528930 SONP18583 2426 aaKnown RBP8.05□□□□□ -1.12
SSBP3-212ENST00000528930 INTS1Q8N201 2190 aaKnown RBP8.05□□□□□ -1.12
SSBP3-212ENST00000528930 TGP01266 2768 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 LOC105369274A0A096LPK9 316 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 LOC102723532A0A0G2JNH3 316 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 OR2A25A4D2G3 310 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 FITM1A5D6W6 292 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 EIF3HO15372 352 aaKnown RBP eCLIP8.05□□□□□ -1.12
SSBP3-212ENST00000528930 ZSCAN9O15535 394 aaPredicted RBP8.05□□□□□ -1.12
SSBP3-212ENST00000528930 SRPX2O60687 465 aaPredicted RBP8.05□□□□□ -1.12
SSBP3-212ENST00000528930 CNOT3O75175 753 aaKnown RBP8.05□□□□□ -1.12
SSBP3-212ENST00000528930 KLF7O75840 302 aaPredicted RBP8.05□□□□□ -1.12
SSBP3-212ENST00000528930 ONECUT2O95948 504 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 C1QAP02745 245 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 H2AFB1P0C5Y9 115 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 H2AFB2P0C5Z0 115 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 ITGAXP20702 1163 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 AGXTP21549 392 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 PCSK6P29122 969 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 CMPK1P30085 196 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 SSTR1P30872 391 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 FOLH1Q04609 750 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 PRDX1Q06830 199 aaKnown RBP8.05□□□□□ -1.12
SSBP3-212ENST00000528930 Q0VFX4 171 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 CALCOCO2Q13137 446 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 ZC3H12BQ5HYM0 836 aaKnown RBP8.05□□□□□ -1.12
SSBP3-212ENST00000528930 C1orf189Q5VU69 101 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 ICE2Q659A1 982 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 FRMPD2BQ6IN97 320 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 ZNF425Q6IV72 752 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 LRRC8EQ6NSJ5 796 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 FAM45BPQ6NSW5 357 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 XKRXQ6PP77 449 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 TMEM207Q6UWW9 146 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 RNF44Q7L0R7 432 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 ZC3HC1Q86WB0 502 aaKnown RBP8.05□□□□□ -1.12
SSBP3-212ENST00000528930 TMEM151BQ8IW70 566 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 OR4N4Q8N0Y3 316 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 FAM45AQ8TCE6 357 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms