RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 MAPK8P45983 427 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 EIF2B2P49770 351 aaKnown RBP7.17□□□□□ -1.26
C11orf54-207ENST00000528288 INAVAQ3KP66 663 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 SETD9Q8NE22 299 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 YIPF6Q96EC8 236 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 OTUB1Q96FW1 271 aaPredicted RBP7.17□□□□□ -1.26
C11orf54-207ENST00000528288 CNDP2Q96KP4 475 aaKnown RBP7.17□□□□□ -1.26
C11orf54-207ENST00000528288 C7orf34Q96L11 122 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 COPS4Q9BT78 406 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 RPS6KA6Q9UK32 745 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 OGDHLQ9ULD0 1010 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 NDRG4Q9ULP0 352 aaKnown RBP7.17□□□□□ -1.26
C11orf54-207ENST00000528288 PLXNB3Q9ULL4 1909 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 A0A0C4DFX4 3053 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 KIAA0100Q14667 2235 aaKnown RBP7.17□□□□□ -1.26
C11orf54-207ENST00000528288 SZT2Q5T011 3432 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 IGLV3-16A0A075B6K0 115 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 EFCAB9A8MZ26 197 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 KPNA3O00505 521 aaPredicted RBP7.17□□□□□ -1.26
C11orf54-207ENST00000528288 PITPNM1O00562 1244 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 PCDH17O14917 1159 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 KPNA5O15131 536 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 JRKO75564 520 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 MYO1DO94832 1006 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 GABARAPO95166 117 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 IGFBP1P08833 259 aaPredicted RBP7.17□□□□□ -1.26
C11orf54-207ENST00000528288 TIMP2P16035 220 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 IDSP22304 550 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 ITGB8P26012 769 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 GTF2E2P29084 291 aaKnown RBP7.17□□□□□ -1.26
C11orf54-207ENST00000528288 HNMTP50135 292 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 RPS3AP61247 264 aaKnown RBP7.17□□□□□ -1.26
C11orf54-207ENST00000528288 MTAPQ13126 283 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 ZNF846Q147U1 533 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 EXOC3L2Q2M3D2 409 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 RPS26P11Q5JNZ5 115 aaPredicted RBP7.17□□□□□ -1.26
C11orf54-207ENST00000528288 DDX53Q86TM3 631 aaKnown RBP7.17□□□□□ -1.26
C11orf54-207ENST00000528288 SLC22A16Q86VW1 577 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 RNF130Q86XS8 419 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 SYNPOQ8N3V7 929 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 HPS1Q92902 700 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 ZHX1-C8orf76Q96EF9 292 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 MCCC1Q96RQ3 725 aaPredicted RBP7.17□□□□□ -1.26
C11orf54-207ENST00000528288 LYSMD1Q96S90 227 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 AKIP1Q9NQ31 210 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 RAB23Q9ULC3 237 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 TRIM17Q9Y577 477 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 A0A0G2JN53 185 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 GRM6O15303 877 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 SERPINB7O75635 380 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 CXCL14O95715 111 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 KLK1P06870 262 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 ADRA2AP08913 450 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 ZNF8P17098 575 aaPredicted RBP7.17□□□□□ -1.26
C11orf54-207ENST00000528288 FEN1P39748 380 aaKnown RBP7.17□□□□□ -1.26
C11orf54-207ENST00000528288 TRPC1P48995 793 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 SRSF11Q05519 484 aaKnown RBP7.17□□□□□ -1.26
C11orf54-207ENST00000528288 LRRC74AQ0VAA2 488 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 SLBPQ14493 270 aaKnown RBP eCLIP7.17□□□□□ -1.26
C11orf54-207ENST00000528288 SMU1Q2TAY7 513 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 RFX4Q33E94 735 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 IQCCQ4KMZ1 466 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 ARMCX6Q7L4S7 300 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 ADIPOR2Q86V24 386 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 C11orf74Q86VG3 221 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 TRAPPC5Q8IUR0 188 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 NPAS3Q8IXF0 933 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 CLP1Q92989 425 aaKnown RBP7.17□□□□□ -1.26
C11orf54-207ENST00000528288 AP2M1Q96CW1 435 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 ZSWIM3Q96MP5 696 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 ZNF300Q96RE9 604 aaPredicted RBP7.17□□□□□ -1.26
C11orf54-207ENST00000528288 YME1L1Q96TA2 773 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 SLC35A5Q9BS91 424 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 RNF208Q9H0X6 261 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 ABCG4Q9H172 646 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 OR2AG1Q9H205 316 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 OR51E2Q9H255 320 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 HMG20AQ9NP66 347 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 TBCCD1Q9NVR7 557 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 NDUFAF4Q9P032 175 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 ZNF229Q9UJW7 825 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 RUVBL1Q9Y265 456 aaKnown RBP7.17□□□□□ -1.26
C11orf54-207ENST00000528288 HS3ST2Q9Y278 367 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 NAALAD2Q9Y3Q0 740 aa7.17□□□□□ -1.26
C11orf54-207ENST00000528288 TBX1O43435 398 aa7.16□□□□□ -1.26
C11orf54-207ENST00000528288 C9P02748 559 aa7.16□□□□□ -1.26
C11orf54-207ENST00000528288 CHRM5P08912 532 aaPredicted RBP7.16□□□□□ -1.26
C11orf54-207ENST00000528288 HNF4AP41235 474 aa7.16□□□□□ -1.26
C11orf54-207ENST00000528288 CD97P48960 835 aa7.16□□□□□ -1.26
C11orf54-207ENST00000528288 PRIM2P49643 509 aa7.16□□□□□ -1.26
C11orf54-207ENST00000528288 TAS2R50P59544 299 aa7.16□□□□□ -1.26
C11orf54-207ENST00000528288 GSTM4Q03013 218 aa7.16□□□□□ -1.26
C11orf54-207ENST00000528288 C2orf80Q0P641 193 aa7.16□□□□□ -1.26
C11orf54-207ENST00000528288 TMEM115Q12893 351 aaPredicted RBP7.16□□□□□ -1.26
C11orf54-207ENST00000528288 DGUOKQ16854 277 aa7.16□□□□□ -1.26
C11orf54-207ENST00000528288 LEXMQ3ZCV2 418 aa7.16□□□□□ -1.26
C11orf54-207ENST00000528288 GGTA1PQ4G0N0 100 aa7.16□□□□□ -1.26
C11orf54-207ENST00000528288 TRMT11Q7Z4G4 463 aaKnown RBP7.16□□□□□ -1.26
C11orf54-207ENST00000528288 SPRED2Q7Z698 418 aa7.16□□□□□ -1.26
C11orf54-207ENST00000528288 SFTPA1Q8IWL2 248 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms