RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 KRT4P19013 534 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 WT1P19544 449 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 IL10P22301 178 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 JAK1P23458 1154 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 F8A1P23610 371 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 ATP5F1P24539 256 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 VARSP26640 1264 aaKnown RBP5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 GCAP28676 217 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 GCGRP47871 477 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 AGTR2P50052 363 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 CSRP3P50461 194 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 RAP1GDS1P52306 607 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 POLE2P56282 527 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 NAA20P61599 178 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 AP2B1P63010 937 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 HERVK_113P63132 956 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 NFKB2Q00653 900 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 ASPHQ12797 758 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 IL10RAQ13651 578 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 DDX39BQ13838 428 aaKnown RBP5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 DOC2AQ14183 400 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 SSPNQ14714 243 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 PCBP2Q15366 365 aaKnown RBP eCLIP5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 NKG7Q16617 165 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 TBR1Q16650 682 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZXDCQ2QGD7 858 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 KRT71Q3SY84 523 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 CCDC153Q494R4 210 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 MINDY4Q4G0A6 757 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 DEFB134Q4QY38 66 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 TMEM35AQ53FP2 167 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 TOR1AIP1Q5JTV8 583 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 CFAP157Q5JU67 520 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 C10orf62Q5T681 223 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 LIPJQ5W064 366 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 GRHL2Q6ISB3 625 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 LCN10Q6JVE6 187 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 MRPL14Q6P1L8 145 aaKnown RBP5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 CHSY3Q70JA7 882 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 MED25Q71SY5 747 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 GOLGA7Q7Z5G4 137 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 VN1R4Q7Z5H5 301 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 MRGPREQ86SM8 312 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 PRSS58Q8IYP2 241 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 PLD6Q8N2A8 252 aaKnown RBP5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 MREGQ8N565 214 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 TMEM102Q8N9M5 508 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 CLEC1AQ8NC01 280 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 KCT2Q8NC54 265 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 LSM14AQ8ND56 463 aaKnown RBP5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZNF740Q8NDX6 193 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 ARMC2Q8NEN0 867 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 OR9A4Q8NGU2 314 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 RDH11Q8TC12 318 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 STT3BQ8TCJ2 826 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 ADAMTS18Q8TE60 1221 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 METTL21AQ8WXB1 218 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 EXTL1Q92935 676 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 GAL3ST3Q96A11 431 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 ESAMQ96AP7 390 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 NACC2Q96BF6 587 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 WDR34Q96EX3 536 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 WBP1Q96G27 269 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 GPR78Q96P69 363 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 SMC6Q96SB8 1091 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 ERVK-6Q9BXR3 956 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 ROGDIQ9GZN7 287 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 SLC26A1Q9H2B4 701 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 ADNPQ9H2P0 1102 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 EPB41L4BQ9H329 900 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 CENPHQ9H3R5 247 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 SOX17Q9H6I2 414 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 IPPKQ9H8X2 491 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 AKIRIN1Q9H9L7 192 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 CLK4Q9HAZ1 481 aaKnown RBP5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 ARGLU1Q9NWB6 273 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 SENP1Q9P0U3 644 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 HCN3Q9P1Z3 774 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 CTSFQ9UBX1 484 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 C19orf25Q9UFG5 118 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 C3orf18Q9UK00 162 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 RAB21Q9UL25 225 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 PLAAQ9Y263 795 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 MRPS33Q9Y291 106 aaKnown RBP5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 NAALAD2Q9Y3Q0 740 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 PCDHGA11Q9Y5H2 935 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 SPACA6W5XKT8 324 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 KNTC1P50748 2209 aa5.13□□□□□ -1.59
HMGB1P40-201ENST00000525121 CHD8Q9HCK8 2581 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 APC2O95996 2303 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 SYNDIG1LA6NDD5 238 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 ARGFXA6NJG6 315 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 A8MT66 165 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 H3BQF6 201 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 SGK494L7N484 410 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 E2F3O00716 465 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 RGS16O15492 202 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 ERI3O43414 337 aaKnown RBP5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 LCMT2O60294 686 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms