RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 DONSONQ9NYP3 566 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 SLC12A6Q9UHW9 1150 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 LCMT1Q9UIC8 334 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 ERRFI1Q9UJM3 462 aaPredicted RBP3.14□□□□□ -1.91
VPS13B-209ENST00000521559 LSM7Q9UK45 103 aaKnown RBP3.14□□□□□ -1.91
VPS13B-209ENST00000521559 HSF4Q9ULV5 492 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 CCL26Q9Y258 94 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 VDAC3Q9Y277 283 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 CARD8Q9Y2G2 431 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 ZNF510Q9Y2H8 683 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 SCINQ9Y6U3 715 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 MKI67P46013 3256 aaKnown RBP3.13□□□□□ -1.91
VPS13B-209ENST00000521559 TCF20Q9UGU0 1960 aaKnown RBP3.13□□□□□ -1.91
VPS13B-209ENST00000521559 GOLGA6L7A0A1B0GV03 622 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 FAM90A7PA6NKC0 464 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 TMEM110-MUSTN1A8MSY1 372 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 FAM90A22PA8MWA6 464 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 FAM90A12PA8MX19 464 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 FAM90A23PA8MXZ1 464 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 HNRNPCL2B2RXH8 293 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 J3KR12 359 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 ZIC3O60481 467 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 ACSL4O60488 711 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 SOCS5O75159 536 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 PROSCO94903 275 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 APOEP02649 317 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 CCDC175P0C221 793 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 IRF1P10914 325 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 SRCP12931 536 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 GLULP15104 373 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 DESP17661 470 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 MCM3P25205 808 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 MIPP30301 263 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 CORO1AP31146 461 aaKnown RBP3.13□□□□□ -1.91
VPS13B-209ENST00000521559 MAN1A1P33908 653 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 PCK1P35558 622 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 SLC1A1P43005 524 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 IFNAR2P48551 515 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 AIF1P55008 147 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 CASP6P55212 293 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 RUNX3Q13761 415 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 SIM2Q14190 667 aaPredicted RBP3.13□□□□□ -1.91
VPS13B-209ENST00000521559 OASLQ15646 514 aaKnown RBP3.13□□□□□ -1.91
VPS13B-209ENST00000521559 BAK1Q16611 211 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 HADHQ16836 314 aaKnown RBP3.13□□□□□ -1.91
VPS13B-209ENST00000521559 SYT16Q17RD7 645 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 C15orf59Q2T9L4 293 aaPredicted RBP3.13□□□□□ -1.91
VPS13B-209ENST00000521559 ITPRIPL2Q3MIP1 535 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 AMZ1Q400G9 498 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 ATP13A5Q4VNC0 1218 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 BOLA3Q53S33 107 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 MPP7Q5T2T1 576 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 SCYL2Q6P3W7 929 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 GDPD4Q6W3E5 623 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 C9orf139Q6ZV77 190 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 FAM131BQ86XD5 332 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 TMEM25Q86YD3 366 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 ARMC8Q8IUR7 673 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 PSTKQ8IV42 348 aaKnown RBP3.13□□□□□ -1.91
VPS13B-209ENST00000521559 UBALD2Q8IYN6 164 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 PARP16Q8N5Y8 322 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 NIPA2Q8N8Q9 360 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 SCCPDHQ8NBX0 429 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 LSM14AQ8ND56 463 aaKnown RBP3.13□□□□□ -1.91
VPS13B-209ENST00000521559 ZNF564Q8TBZ8 553 aaPredicted RBP3.13□□□□□ -1.91
VPS13B-209ENST00000521559 CREB3L4Q8TEY5 395 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 FAM172AQ8WUF8 416 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 UBE2Q2Q8WVN8 375 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 DNASE1L2Q92874 299 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 SNAPC3Q92966 411 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 NTAN1Q96AB6 310 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 ZUFSPQ96AP4 578 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 RNF125Q96EQ8 232 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 TMA16Q96EY4 203 aaKnown RBP3.13□□□□□ -1.91
VPS13B-209ENST00000521559 APOPT1Q96IL0 206 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 BTN2A3PQ96KV6 586 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 C1orf74Q96LT6 269 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 ZNF830Q96NB3 372 aaPredicted RBP3.13□□□□□ -1.91
VPS13B-209ENST00000521559 ZNF570Q96NI8 536 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 NODALQ96S42 347 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 PRMT1Q99873 361 aaKnown RBP3.13□□□□□ -1.91
VPS13B-209ENST00000521559 DESI2Q9BSY9 194 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 TSGA10Q9BZW7 698 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 TRIM7Q9C029 511 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 TKTL2Q9H0I9 626 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 SLC32A1Q9H598 525 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 C8orf33Q9H7E9 229 aaPredicted RBP3.13□□□□□ -1.91
VPS13B-209ENST00000521559 ECT2Q9H8V3 914 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 HPS4Q9NQG7 708 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 SPHK2Q9NRA0 654 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 PIGVQ9NUD9 493 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 ARHGEF38Q9NXL2 777 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 ZNF224Q9NZL3 707 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 PEMTQ9UBM1 199 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 XPO7Q9UIA9 1087 aaKnown RBP3.13□□□□□ -1.91
VPS13B-209ENST00000521559 ANAPC7Q9UJX3 599 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 STOML2Q9UJZ1 356 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 DUSP12Q9UNI6 340 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 PPP2R2CQ9Y2T4 447 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 SCN1AP35498 2009 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms