RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 HMOX2P30519 316 aa14.61□□□□□ -0.07
LSM1-203ENST00000520755 RPL14P50914 215 aaKnown RBP14.61□□□□□ -0.07
LSM1-203ENST00000520755 NEK2P51955 445 aa14.61□□□□□ -0.07
LSM1-203ENST00000520755 SNRPNP63162 240 aaKnown RBP14.61□□□□□ -0.07
LSM1-203ENST00000520755 CYP4F2P78329 520 aa14.61□□□□□ -0.07
LSM1-203ENST00000520755 FOXK2Q01167 660 aa14.61□□□□□ -0.07
LSM1-203ENST00000520755 RELAQ04206 551 aa14.61□□□□□ -0.07
LSM1-203ENST00000520755 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.61□□□□□ -0.07
LSM1-203ENST00000520755 PAGE2BQ5JRK9 111 aa14.61□□□□□ -0.07
LSM1-203ENST00000520755 PRAMEF17Q5VTA0 474 aa14.61□□□□□ -0.07
LSM1-203ENST00000520755 FRG2Q64ET8 278 aa14.61□□□□□ -0.07
LSM1-203ENST00000520755 ZFAND4Q86XD8 727 aa14.61□□□□□ -0.07
LSM1-203ENST00000520755 OR4N4Q8N0Y3 316 aa14.61□□□□□ -0.07
LSM1-203ENST00000520755 KRT78Q8N1N4 520 aa14.61□□□□□ -0.07
LSM1-203ENST00000520755 MFSD9Q8NBP5 474 aa14.61□□□□□ -0.07
LSM1-203ENST00000520755 METTL6Q8TCB7 284 aa14.61□□□□□ -0.07
LSM1-203ENST00000520755 ZNF473Q8WTR7 871 aaKnown RBP14.61□□□□□ -0.07
LSM1-203ENST00000520755 TWIST2Q8WVJ9 160 aa14.61□□□□□ -0.07
LSM1-203ENST00000520755 MAGEB10Q96LZ2 347 aaPredicted RBP14.61□□□□□ -0.07
LSM1-203ENST00000520755 FRG2BQ96QU4 278 aa14.61□□□□□ -0.07
LSM1-203ENST00000520755 ULBP3Q9BZM4 244 aa14.61□□□□□ -0.07
LSM1-203ENST00000520755 PITHD1Q9GZP4 211 aaPredicted RBP14.61□□□□□ -0.07
LSM1-203ENST00000520755 RHBGQ9H310 441 aa14.61□□□□□ -0.07
LSM1-203ENST00000520755 DMRT3Q9NQL9 472 aa14.61□□□□□ -0.07
LSM1-203ENST00000520755 STARD5Q9NSY2 213 aa14.61□□□□□ -0.07
LSM1-203ENST00000520755 ADAM21Q9UKJ8 722 aa14.61□□□□□ -0.07
LSM1-203ENST00000520755 TSC22D4Q9Y3Q8 395 aa14.61□□□□□ -0.07
LSM1-203ENST00000520755 ASPMQ8IZT6 3477 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 C4orf51C9J302 202 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 H0YGG7 62 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 H3BMH7 237 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 SKAP2O75563 359 aaPredicted RBP14.6□□□□□ -0.07
LSM1-203ENST00000520755 STK17BO94768 372 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 KIAA0754O94854 1291 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 ETHE1O95571 254 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 PDYNP01213 254 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 NTRK1P04629 796 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 KITP10721 976 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 PCNAP12004 261 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 CXCR2P25025 360 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 SEC24CP53992 1094 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 ARF3P61204 181 aaPredicted RBP14.6□□□□□ -0.07
LSM1-203ENST00000520755 RPS15AP62244 130 aaKnown RBP14.6□□□□□ -0.07
LSM1-203ENST00000520755 HYAL2Q12891 473 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 ABRAXAS2Q15018 415 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 RBBP5Q15291 538 aaKnown RBP14.6□□□□□ -0.07
LSM1-203ENST00000520755 PDCD2Q16342 344 aaPredicted RBP14.6□□□□□ -0.07
LSM1-203ENST00000520755 WASHC2DQ5SRD0 308 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 SCIMPQ6UWF3 145 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 RNF165Q6ZSG1 346 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 MTERF4Q7Z6M4 381 aaKnown RBP14.6□□□□□ -0.07
LSM1-203ENST00000520755 CRLF3Q8IUI8 442 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 CLYBLQ8N0X4 340 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 TBC1D19Q8N5T2 526 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 ZNF655Q8N720 491 aaPredicted RBP14.6□□□□□ -0.07
LSM1-203ENST00000520755 HUS1BQ8NHY5 278 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 PIWIL2Q8TC59 973 aaKnown RBP14.6□□□□□ -0.07
LSM1-203ENST00000520755 CREB3L4Q8TEY5 395 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 RERGQ96A58 199 aaPredicted RBP14.6□□□□□ -0.07
LSM1-203ENST00000520755 ZNF285Q96NJ3 590 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 B3GNT4Q9C0J1 378 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 SLC7A5P2Q9GIP4 190 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 WDR70Q9NW82 654 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 PCDHGA11Q9Y5H2 935 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 AP1M2Q9Y6Q5 423 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 NUP210LQ5VU65 1888 aa14.6□□□□□ -0.07
LSM1-203ENST00000520755 TEX51A0A1B0GUA7 166 aa14.59□□□□□ -0.07
LSM1-203ENST00000520755 MAGEB17A8MXT2 336 aa14.59□□□□□ -0.07
LSM1-203ENST00000520755 PIP5K1BO14986 540 aa14.59□□□□□ -0.07
LSM1-203ENST00000520755 ZSCAN9O15535 394 aaPredicted RBP14.59□□□□□ -0.07
LSM1-203ENST00000520755 ZNF749O43361 778 aa14.59□□□□□ -0.07
LSM1-203ENST00000520755 SRPX2O60687 465 aaPredicted RBP14.59□□□□□ -0.07
LSM1-203ENST00000520755 CRCPO75575 148 aa14.59□□□□□ -0.07
LSM1-203ENST00000520755 VIMP08670 466 aaKnown RBP14.59□□□□□ -0.07
LSM1-203ENST00000520755 ALOX15P16050 662 aaPredicted RBP14.59□□□□□ -0.07
LSM1-203ENST00000520755 AHRP35869 848 aa14.59□□□□□ -0.07
LSM1-203ENST00000520755 BTKQ06187 659 aa14.59□□□□□ -0.07
LSM1-203ENST00000520755 DDX39BQ13838 428 aaKnown RBP14.59□□□□□ -0.07
LSM1-203ENST00000520755 SGO1Q5FBB7 561 aa14.59□□□□□ -0.07
LSM1-203ENST00000520755 XKR7Q5GH72 579 aa14.59□□□□□ -0.07
LSM1-203ENST00000520755 TCTE1Q5JU00 501 aa14.59□□□□□ -0.07
LSM1-203ENST00000520755 TLDC1Q6P9B6 456 aa14.59□□□□□ -0.07
LSM1-203ENST00000520755 CSNK1A1LQ8N752 337 aa14.59□□□□□ -0.07
LSM1-203ENST00000520755 OR2T11Q8NH01 316 aa14.59□□□□□ -0.07
LSM1-203ENST00000520755 FGF11Q92914 225 aa14.59□□□□□ -0.07
LSM1-203ENST00000520755 UBE2E3Q969T4 207 aa14.59□□□□□ -0.07
LSM1-203ENST00000520755 MTFMTQ96DP5 389 aaKnown RBP14.59□□□□□ -0.07
LSM1-203ENST00000520755 TM4SF19Q96DZ7 209 aa14.59□□□□□ -0.07
LSM1-203ENST00000520755 CHMP6Q96FZ7 201 aa14.59□□□□□ -0.07
LSM1-203ENST00000520755 C3orf30Q96M34 536 aa14.59□□□□□ -0.07
LSM1-203ENST00000520755 MTERF1Q99551 399 aaKnown RBP14.59□□□□□ -0.07
LSM1-203ENST00000520755 MACROD1Q9BQ69 325 aa14.59□□□□□ -0.07
LSM1-203ENST00000520755 MS4A8Q9BY19 250 aa14.59□□□□□ -0.07
LSM1-203ENST00000520755 ACPTQ9BZG2 426 aa14.59□□□□□ -0.07
LSM1-203ENST00000520755 ELOVL6Q9H5J4 265 aa14.59□□□□□ -0.07
LSM1-203ENST00000520755 ACTR5Q9H9F9 607 aaPredicted RBP14.59□□□□□ -0.07
LSM1-203ENST00000520755 ZFP69BQ9UJL9 534 aa14.59□□□□□ -0.07
LSM1-203ENST00000520755 SNX6Q9UNH7 406 aa14.59□□□□□ -0.07
LSM1-203ENST00000520755 CCL27Q9Y4X3 112 aa14.59□□□□□ -0.07
LSM1-203ENST00000520755 SERTM1A2A2V5 107 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms