RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 KITP10721 976 aa16.97■□□□□ 0.31
SDC2-205ENST00000520233 PTX3P26022 381 aaPredicted RBP16.97■□□□□ 0.31
SDC2-205ENST00000520233 RPS13P62277 151 aaKnown RBP16.97■□□□□ 0.31
SDC2-205ENST00000520233 HYAL2Q12891 473 aa16.97■□□□□ 0.31
SDC2-205ENST00000520233 TLDC1Q6P9B6 456 aa16.97■□□□□ 0.31
SDC2-205ENST00000520233 CHSY3Q70JA7 882 aa16.97■□□□□ 0.31
SDC2-205ENST00000520233 TRIM46Q7Z4K8 759 aa16.97■□□□□ 0.31
SDC2-205ENST00000520233 GPR135Q8IZ08 494 aa16.97■□□□□ 0.31
SDC2-205ENST00000520233 RNF175Q8N4F7 328 aa16.97■□□□□ 0.31
SDC2-205ENST00000520233 ZNF317Q96PQ6 595 aaPredicted RBP16.97■□□□□ 0.31
SDC2-205ENST00000520233 MACROD1Q9BQ69 325 aa16.97■□□□□ 0.31
SDC2-205ENST00000520233 SLC6A16Q9GZN6 736 aa16.97■□□□□ 0.31
SDC2-205ENST00000520233 TUBB1Q9H4B7 451 aa16.97■□□□□ 0.31
SDC2-205ENST00000520233 PFDN4Q9NQP4 134 aa16.97■□□□□ 0.31
SDC2-205ENST00000520233 VTI1BQ9UEU0 232 aa16.97■□□□□ 0.31
SDC2-205ENST00000520233 MARCOQ9UEW3 520 aaPredicted RBP16.97■□□□□ 0.31
SDC2-205ENST00000520233 FAM149AA5PLN7 773 aa16.96■□□□□ 0.31
SDC2-205ENST00000520233 LRIT2A6NDA9 550 aa16.96■□□□□ 0.31
SDC2-205ENST00000520233 URADA6NGE7 173 aa16.96■□□□□ 0.31
SDC2-205ENST00000520233 SLC28A1O00337 649 aa16.96■□□□□ 0.31
SDC2-205ENST00000520233 PIP5K1BO14986 540 aa16.96■□□□□ 0.31
SDC2-205ENST00000520233 POLR1CO15160 346 aaPredicted RBP16.96■□□□□ 0.31
SDC2-205ENST00000520233 HDAC3O15379 428 aa16.96■□□□□ 0.31
SDC2-205ENST00000520233 HYAL3O43820 417 aaPredicted RBP16.96■□□□□ 0.31
SDC2-205ENST00000520233 JMJD7P0C870 316 aa16.96■□□□□ 0.31
SDC2-205ENST00000520233 LSP1P33241 339 aa16.96■□□□□ 0.31
SDC2-205ENST00000520233 EMP3P54852 163 aa16.96■□□□□ 0.31
SDC2-205ENST00000520233 STXBP1P61764 594 aaKnown RBP16.96■□□□□ 0.31
SDC2-205ENST00000520233 GNGT1P63211 74 aa16.96■□□□□ 0.31
SDC2-205ENST00000520233 CUL3Q13618 768 aa16.96■□□□□ 0.31
SDC2-205ENST00000520233 GRM7Q14831 915 aa16.96■□□□□ 0.31
SDC2-205ENST00000520233 HKDC1Q2TB90 917 aa16.96■□□□□ 0.31
SDC2-205ENST00000520233 ADPRMQ3LIE5 342 aa16.96■□□□□ 0.31
SDC2-205ENST00000520233 TMEM35AQ53FP2 167 aa16.96■□□□□ 0.31
SDC2-205ENST00000520233 DEPDC1Q5TB30 811 aa16.96■□□□□ 0.31
SDC2-205ENST00000520233 KHDRBS2Q5VWX1 349 aaKnown RBP16.96■□□□□ 0.31
SDC2-205ENST00000520233 SCIMPQ6UWF3 145 aa16.96■□□□□ 0.31
SDC2-205ENST00000520233 PPP1R3BQ86XI6 285 aa16.96■□□□□ 0.31
SDC2-205ENST00000520233 WDR75Q8IWA0 830 aaKnown RBP16.96■□□□□ 0.31
SDC2-205ENST00000520233 DDIASQ8IXT1 998 aa16.96■□□□□ 0.31
SDC2-205ENST00000520233 TTC29Q8NA56 475 aaPredicted RBP16.96■□□□□ 0.31
SDC2-205ENST00000520233 HBEGFQ99075 208 aa16.96■□□□□ 0.31
SDC2-205ENST00000520233 SERPINI1Q99574 410 aa16.96■□□□□ 0.31
SDC2-205ENST00000520233 ACPTQ9BZG2 426 aa16.96■□□□□ 0.31
SDC2-205ENST00000520233 APMAPQ9HDC9 416 aa16.96■□□□□ 0.31
SDC2-205ENST00000520233 STARD5Q9NSY2 213 aa16.96■□□□□ 0.31
SDC2-205ENST00000520233 NMRK1Q9NWW6 199 aa16.96■□□□□ 0.31
SDC2-205ENST00000520233 IRAK4Q9NWZ3 460 aa16.96■□□□□ 0.31
SDC2-205ENST00000520233 SLC39A1Q9NY26 324 aa16.96■□□□□ 0.31
SDC2-205ENST00000520233 RUVBL1Q9Y265 456 aaKnown RBP16.96■□□□□ 0.31
SDC2-205ENST00000520233 A0A1W2PNU3 283 aaPredicted RBP16.95■□□□□ 0.3
SDC2-205ENST00000520233 SKAP2O75563 359 aaPredicted RBP16.95■□□□□ 0.3
SDC2-205ENST00000520233 TGDSO95455 350 aa16.95■□□□□ 0.3
SDC2-205ENST00000520233 ETHE1O95571 254 aa16.95■□□□□ 0.3
SDC2-205ENST00000520233 LINC00032P0C843 101 aa16.95■□□□□ 0.3
SDC2-205ENST00000520233 ITIH1P19827 911 aa16.95■□□□□ 0.3
SDC2-205ENST00000520233 ETV5P41161 510 aa16.95■□□□□ 0.3
SDC2-205ENST00000520233 RAB15P59190 212 aa16.95■□□□□ 0.3
SDC2-205ENST00000520233 BTKQ06187 659 aa16.95■□□□□ 0.3
SDC2-205ENST00000520233 PDCD2Q16342 344 aaPredicted RBP16.95■□□□□ 0.3
SDC2-205ENST00000520233 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.95■□□□□ 0.3
SDC2-205ENST00000520233 XKR7Q5GH72 579 aa16.95■□□□□ 0.3
SDC2-205ENST00000520233 TOR1AIP1Q5JTV8 583 aa16.95■□□□□ 0.3
SDC2-205ENST00000520233 YOD1Q5VVQ6 348 aaPredicted RBP16.95■□□□□ 0.3
SDC2-205ENST00000520233 GARNL3Q5VVW2 1013 aa16.95■□□□□ 0.3
SDC2-205ENST00000520233 TMEM214Q6NUQ4 689 aaKnown RBP16.95■□□□□ 0.3
SDC2-205ENST00000520233 LRRC34Q8IZ02 419 aa16.95■□□□□ 0.3
SDC2-205ENST00000520233 ARHGEF39Q8N4T4 335 aa16.95■□□□□ 0.3
SDC2-205ENST00000520233 KCT2Q8NC54 265 aa16.95■□□□□ 0.3
SDC2-205ENST00000520233 CHMP6Q96FZ7 201 aa16.95■□□□□ 0.3
SDC2-205ENST00000520233 TAAR9Q96RI9 348 aa16.95■□□□□ 0.3
SDC2-205ENST00000520233 REXO4Q9GZR2 422 aaKnown RBP16.95■□□□□ 0.3
SDC2-205ENST00000520233 AICDAQ9GZX7 198 aa16.95■□□□□ 0.3
SDC2-205ENST00000520233 OR51B5Q9H339 312 aa16.95■□□□□ 0.3
SDC2-205ENST00000520233 FGFR1OP2Q9NVK5 253 aa16.95■□□□□ 0.3
SDC2-205ENST00000520233 ADAM21Q9UKJ8 722 aa16.95■□□□□ 0.3
SDC2-205ENST00000520233 SLC12A4Q9UP95 1085 aa16.95■□□□□ 0.3
SDC2-205ENST00000520233 CCL27Q9Y4X3 112 aa16.95■□□□□ 0.3
SDC2-205ENST00000520233 SLC22A7Q9Y694 548 aa16.95■□□□□ 0.3
SDC2-205ENST00000520233 USH1CQ9Y6N9 552 aa16.95■□□□□ 0.3
SDC2-205ENST00000520233 HYKKA2RU49 373 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 TRPC5OSA6NMA1 111 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 RGS14O43566 566 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 JUNP05412 331 aaKnown RBP16.94■□□□□ 0.3
SDC2-205ENST00000520233 HNRNPH1P31943 449 aaKnown RBP16.94■□□□□ 0.3
SDC2-205ENST00000520233 GCGRP47871 477 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 ID4P47928 161 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 ARFIP1P53367 373 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 MAPK10P53779 464 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 ARSFP54793 590 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 NDUFA9Q16795 377 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 IMPG1Q17R60 797 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 FAM214AQ32MH5 1076 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 C3orf38Q5JPI3 329 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 DCAF12Q5T6F0 453 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 CEACAM20Q6UY09 585 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 Q6ZSR9 355 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 SRFBP1Q8NEF9 429 aaKnown RBP16.94■□□□□ 0.3
SDC2-205ENST00000520233 OR2L5Q8NG80 312 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 GAL3ST3Q96A11 431 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms