RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 PDK4Q16654 411 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 VWA2Q5GFL6 755 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 VWA5B1Q5TIE3 1220 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 KLC3Q6P597 504 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 ABHD13Q7L211 337 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 LRRC70Q7Z2Q7 622 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 PRICKLE2Q7Z3G6 844 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 ZC3H7AQ8IWR0 971 aaKnown RBP12.11□□□□□ -0.47
CLCN3-210ENST00000515420 KRT78Q8N1N4 520 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 GALNT16Q8N428 558 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 ANKRD53Q8N9V6 530 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 KCT2Q8NC54 265 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 ZNF740Q8NDX6 193 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 FDCSPQ8NFU4 85 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 OR11G2Q8NGC1 345 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 OR9A4Q8NGU2 314 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 WDR34Q96EX3 536 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 OR1F2PQ96R84 312 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 EFCAB11Q9BUY7 163 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 SLC6A16Q9GZN6 736 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 SPNS1Q9H2V7 528 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 FBXL4Q9UKA2 621 aa12.11□□□□□ -0.47
CLCN3-210ENST00000515420 HELZ2Q9BYK8 2649 aaKnown RBP12.11□□□□□ -0.47
CLCN3-210ENST00000515420 A0A096LPK6 155 aa12.1□□□□□ -0.47
CLCN3-210ENST00000515420 J3QKU1 62 aa12.1□□□□□ -0.47
CLCN3-210ENST00000515420 K7EM74 188 aa12.1□□□□□ -0.47
CLCN3-210ENST00000515420 MAP2K7O14733 419 aa12.1□□□□□ -0.47
CLCN3-210ENST00000515420 GALR3O60755 368 aaPredicted RBP12.1□□□□□ -0.47
CLCN3-210ENST00000515420 DPM1O60762 260 aa12.1□□□□□ -0.47
CLCN3-210ENST00000515420 KLHL18O94889 574 aa12.1□□□□□ -0.47
CLCN3-210ENST00000515420 KLHL2O95198 593 aa12.1□□□□□ -0.47
CLCN3-210ENST00000515420 BMP10O95393 424 aa12.1□□□□□ -0.47
CLCN3-210ENST00000515420 HPP00738 406 aa12.1□□□□□ -0.47
CLCN3-210ENST00000515420 PDGFAP04085 211 aa12.1□□□□□ -0.47
CLCN3-210ENST00000515420 ALOX12P18054 663 aa12.1□□□□□ -0.47
CLCN3-210ENST00000515420 HPDP32754 393 aaPredicted RBP12.1□□□□□ -0.47
CLCN3-210ENST00000515420 MSH2P43246 934 aa12.1□□□□□ -0.47
CLCN3-210ENST00000515420 KCNC1P48547 511 aa12.1□□□□□ -0.47
CLCN3-210ENST00000515420 HSPA7P48741 367 aa12.1□□□□□ -0.47
CLCN3-210ENST00000515420 EMP2P54851 167 aa12.1□□□□□ -0.47
CLCN3-210ENST00000515420 LAPTM5Q13571 262 aa12.1□□□□□ -0.47
CLCN3-210ENST00000515420 TBCCQ15814 346 aa12.1□□□□□ -0.47
CLCN3-210ENST00000515420 C18orf21Q32NC0 220 aaPredicted RBP12.1□□□□□ -0.47
CLCN3-210ENST00000515420 UBAP2Q5T6F2 1119 aaKnown RBP12.1□□□□□ -0.47
CLCN3-210ENST00000515420 METTL2BQ6P1Q9 378 aaKnown RBP12.1□□□□□ -0.47
CLCN3-210ENST00000515420 TMIGD1Q6UXZ0 262 aa12.1□□□□□ -0.47
CLCN3-210ENST00000515420 SHISA6Q6ZSJ9 500 aa12.1□□□□□ -0.47
CLCN3-210ENST00000515420 PTRH1Q86Y79 214 aaKnown RBP12.1□□□□□ -0.47
CLCN3-210ENST00000515420 TMEM151BQ8IW70 566 aa12.1□□□□□ -0.47
CLCN3-210ENST00000515420 TEX19Q8NA77 164 aa12.1□□□□□ -0.47
CLCN3-210ENST00000515420 ZCCHC10Q8TBK6 192 aa12.1□□□□□ -0.47
CLCN3-210ENST00000515420 KCTD4Q8WVF5 259 aa12.1□□□□□ -0.47
CLCN3-210ENST00000515420 NXNL1Q96CM4 212 aa12.1□□□□□ -0.47
CLCN3-210ENST00000515420 MRRFQ96E11 262 aaKnown RBP12.1□□□□□ -0.47
CLCN3-210ENST00000515420 PTCD3Q96EY7 689 aaKnown RBP12.1□□□□□ -0.47
CLCN3-210ENST00000515420 MACROD1Q9BQ69 325 aa12.1□□□□□ -0.47
CLCN3-210ENST00000515420 NUDT9Q9BW91 350 aa12.1□□□□□ -0.47
CLCN3-210ENST00000515420 CD244Q9BZW8 370 aa12.1□□□□□ -0.47
CLCN3-210ENST00000515420 LOC102723996A0A087X1L8 192 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 SUPT3HB4E1H0 165 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 KLK8O60259 260 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 SUPT3HO75486 399 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 STATHP02808 62 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 HEXBP07686 556 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 RHOXF2BP0C7M4 288 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 COL6A2P12110 1019 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 MTHFD2P13995 350 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 NR1D1P20393 614 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 VARSP26640 1264 aaKnown RBP12.09□□□□□ -0.47
CLCN3-210ENST00000515420 CASP2P42575 452 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 XCR1P46094 333 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 STXBP1P61764 594 aaKnown RBP12.09□□□□□ -0.47
CLCN3-210ENST00000515420 AP2B1P63010 937 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 SNRPNP63162 240 aaKnown RBP12.09□□□□□ -0.47
CLCN3-210ENST00000515420 MAT1AQ00266 395 aaKnown RBP12.09□□□□□ -0.47
CLCN3-210ENST00000515420 IRF9Q00978 393 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 SLBPQ14493 270 aaKnown RBP eCLIP12.09□□□□□ -0.47
CLCN3-210ENST00000515420 RBBP5Q15291 538 aaKnown RBP12.09□□□□□ -0.47
CLCN3-210ENST00000515420 SYT16Q17RD7 645 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 TSNAXIP1Q2TAA8 658 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 PAGE2BQ5JRK9 111 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 TMEM205Q6UW68 189 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 IGFL3Q6UXB1 125 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 NDUFAF7Q7L592 441 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 PRSS41Q7RTY9 318 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 LAPTM4BQ86VI4 370 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 PDSS2Q86YH6 399 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 PRSS58Q8IYP2 241 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 OR51Q1Q8NH59 317 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 CREB3L4Q8TEY5 395 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 DCAKDQ8WVC6 231 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.09□□□□□ -0.47
CLCN3-210ENST00000515420 MOCOSQ96EN8 888 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 RHOXF2Q9BQY4 288 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 YIPF2Q9BWQ6 316 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 ZNF552Q9H707 407 aaPredicted RBP12.09□□□□□ -0.47
CLCN3-210ENST00000515420 RIC8BQ9NVN3 520 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 FETUBQ9UGM5 382 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 MKL2Q9ULH7 1088 aa12.09□□□□□ -0.47
CLCN3-210ENST00000515420 TMCO1Q9UM00 188 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms