RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 PLD3Q8IV08 490 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 RCBTB1Q8NDN9 531 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 TWIST2Q8WVJ9 160 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 SLC13A3Q8WWT9 602 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 KCNA7Q96RP8 456 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 SERPINI1Q99574 410 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 MS4A8Q9BY19 250 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 NLNQ9BYT8 704 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 SHCBP1LQ9BZQ2 653 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 NMRK1Q9NWW6 199 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 SIRT5Q9NXA8 310 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 SERTAD3Q9UJW9 196 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 CCL27Q9Y4X3 112 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 TIMM22Q9Y584 194 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 SLC22A7Q9Y694 548 aa11.43□□□□□ -0.58
PDLIM5-220ENST00000514830 LOC105369274A0A096LPK9 316 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 LOC102723532A0A0G2JNH3 316 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 A0A0J9YVX5 310 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 LRIT2A6NDA9 550 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 URADA6NGE7 173 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 TRPC5OSA6NMA1 111 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 MAGEB17A8MXT2 336 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 TMEM233B4DJY2 109 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 SLC28A1O00337 649 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 ZNF195O14628 629 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 FFAR3O14843 346 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 GPR42O15529 346 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 SMIM10L1P0DMW3 83 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 HTR6P50406 440 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 ITGA1P56199 1179 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 STXBP1P61764 594 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 RGS1Q08116 209 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 CYP4F3Q08477 520 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 TUBB3Q13509 450 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 KCNAB1Q14722 419 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 ABRAXAS2Q15018 415 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 SMU1Q2TAY7 513 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 DEPDC1Q5TB30 811 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 NIPAL1Q6NVV3 410 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 CHSY3Q70JA7 882 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 WDR75Q8IWA0 830 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 OR4N4Q8N0Y3 316 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 CSNK1A1LQ8N752 337 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 SRFBP1Q8NEF9 429 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 WDR36Q8NI36 951 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 SELENOMQ8WWX9 145 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 CHMP6Q96FZ7 201 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 PRR11Q96HE9 360 aaPredicted RBP11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 SMIM10Q96HG1 83 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 ZPBPQ9BS86 351 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 DDA1Q9BW61 102 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 TUBB1Q9H4B7 451 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 MEAF6Q9HAF1 191 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 PNPOQ9NVS9 261 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 ADAM21Q9UKJ8 722 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 PCDHGA3Q9Y5H0 932 aa11.42□□□□□ -0.58
PDLIM5-220ENST00000514830 FER1L5A0AVI2 2057 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 TMEM150CB9EJG8 249 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 POLR3GO15318 223 aaPredicted RBP11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 P2RX6O15547 441 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 NDUFS4O43181 175 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 VPS4BO75351 444 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 OR2B3O76000 313 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 RSL1D1O76021 490 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 PCNAP12004 261 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 ACPPP15309 386 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 SERPINB3P29508 390 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 NEK2P51955 445 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 ARSFP54793 590 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 GYS2P54840 703 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 VSX2P58304 361 aaPredicted RBP11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 FAM53BQ14153 422 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 GRM7Q14831 915 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 GPR19Q15760 415 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 CCDC157Q569K6 752 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 TCHHL1Q5QJ38 904 aaPredicted RBP11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 WASHC2DQ5SRD0 308 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 KHDRBS2Q5VWX1 349 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 ADNP2Q6IQ32 1131 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 TMEM214Q6NUQ4 689 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 FAM47EQ6ZV65 393 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 RAB11FIP2Q7L804 512 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 GPR135Q8IZ08 494 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 OR2L5Q8NG80 312 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 OR1L3Q8NH93 324 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 N4BP2L2Q92802 583 aaPredicted RBP11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 GAL3ST3Q96A11 431 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 MS4A6EQ96DS6 147 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 C19orf60Q96EN9 201 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 MVB12AQ96EY5 273 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 C11orf24Q96F05 449 aaPredicted RBP11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 MAELQ96JY0 434 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 TEFMQ96QE5 360 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 OR6C1Q96RD1 312 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 MTERF1Q99551 399 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 CLK4Q9HAZ1 481 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 FARSBQ9NSD9 589 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 OCIAD1Q9NX40 245 aa11.41□□□□□ -0.58
PDLIM5-220ENST00000514830 VPS29Q9UBQ0 182 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms