RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 PHF10Q8WUB8 498 aaKnown RBP11.84□□□□□ -0.51
VEGFA-216ENST00000512683 HIST1H2AHQ96KK5 128 aa11.84□□□□□ -0.51
VEGFA-216ENST00000512683 GPR21Q99679 349 aa11.84□□□□□ -0.51
VEGFA-216ENST00000512683 OLFM1Q99784 485 aa11.84□□□□□ -0.51
VEGFA-216ENST00000512683 HIST1H2AJQ99878 128 aa11.84□□□□□ -0.51
VEGFA-216ENST00000512683 H2AFJQ9BTM1 129 aa11.84□□□□□ -0.51
VEGFA-216ENST00000512683 TRIM45Q9H8W5 580 aaPredicted RBP11.84□□□□□ -0.51
VEGFA-216ENST00000512683 PLAC1Q9HBJ0 212 aa11.84□□□□□ -0.51
VEGFA-216ENST00000512683 TAS2R13Q9NYV9 303 aa11.84□□□□□ -0.51
VEGFA-216ENST00000512683 APCP25054 2843 aa11.83□□□□□ -0.52
VEGFA-216ENST00000512683 SCN3AQ9NY46 2000 aa11.83□□□□□ -0.52
VEGFA-216ENST00000512683 ASNA1O43681 348 aa11.83□□□□□ -0.52
VEGFA-216ENST00000512683 CLDN14O95500 239 aa11.83□□□□□ -0.52
VEGFA-216ENST00000512683 F10P00742 488 aa11.83□□□□□ -0.52
VEGFA-216ENST00000512683 SP1P08047 785 aa11.83□□□□□ -0.52
VEGFA-216ENST00000512683 NPPBP16860 134 aa11.83□□□□□ -0.52
VEGFA-216ENST00000512683 TCP1P17987 556 aaKnown RBP11.83□□□□□ -0.52
VEGFA-216ENST00000512683 PGAM1P18669 254 aa11.83□□□□□ -0.52
VEGFA-216ENST00000512683 POU3F2P20265 443 aaPredicted RBP11.83□□□□□ -0.52
VEGFA-216ENST00000512683 GABRB3P28472 473 aa11.83□□□□□ -0.52
VEGFA-216ENST00000512683 GRNP28799 593 aaKnown RBP11.83□□□□□ -0.52
VEGFA-216ENST00000512683 EFNA3P52797 238 aa11.83□□□□□ -0.52
VEGFA-216ENST00000512683 CRYMQ14894 314 aa11.83□□□□□ -0.52
VEGFA-216ENST00000512683 PAPD4Q6PIY7 484 aaKnown RBP11.83□□□□□ -0.52
VEGFA-216ENST00000512683 AGTRAPQ6RW13 159 aa11.83□□□□□ -0.52
VEGFA-216ENST00000512683 LCTLQ6UWM7 567 aa11.83□□□□□ -0.52
VEGFA-216ENST00000512683 RPS19BP1Q86WX3 136 aaKnown RBP11.83□□□□□ -0.52
VEGFA-216ENST00000512683 CREG2Q8IUH2 290 aa11.83□□□□□ -0.52
VEGFA-216ENST00000512683 PLD3Q8IV08 490 aa11.83□□□□□ -0.52
VEGFA-216ENST00000512683 GHDCQ8N2G8 530 aa11.83□□□□□ -0.52
VEGFA-216ENST00000512683 MFSD9Q8NBP5 474 aa11.83□□□□□ -0.52
VEGFA-216ENST00000512683 C2CD4AQ8NCU7 369 aaPredicted RBP11.83□□□□□ -0.52
VEGFA-216ENST00000512683 OR4K1Q8NGD4 311 aa11.83□□□□□ -0.52
VEGFA-216ENST00000512683 ATL1Q8WXF7 558 aa11.83□□□□□ -0.52
VEGFA-216ENST00000512683 MTFMTQ96DP5 389 aaKnown RBP11.83□□□□□ -0.52
VEGFA-216ENST00000512683 C14orf79Q96F83 325 aa11.83□□□□□ -0.52
VEGFA-216ENST00000512683 LURAP1Q96LR2 239 aa11.83□□□□□ -0.52
VEGFA-216ENST00000512683 FAM167BQ9BTA0 163 aa11.83□□□□□ -0.52
VEGFA-216ENST00000512683 AARSD1Q9BTE6 412 aaKnown RBP11.83□□□□□ -0.52
VEGFA-216ENST00000512683 SGPP1Q9BX95 441 aa11.83□□□□□ -0.52
VEGFA-216ENST00000512683 TRIM54Q9BYV2 358 aa11.83□□□□□ -0.52
VEGFA-216ENST00000512683 IARS2Q9NSE4 1012 aaKnown RBP11.83□□□□□ -0.52
VEGFA-216ENST00000512683 TRMT6Q9UJA5 497 aaKnown RBP11.83□□□□□ -0.52
VEGFA-216ENST00000512683 MEMO1Q9Y316 297 aa11.83□□□□□ -0.52
VEGFA-216ENST00000512683 SVILO95425 2214 aa11.83□□□□□ -0.52
VEGFA-216ENST00000512683 TEP1Q99973 2627 aaKnown RBP11.83□□□□□ -0.52
VEGFA-216ENST00000512683 POLQO75417 2590 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 SYNDIG1LA6NDD5 238 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 URADA6NGE7 173 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 E9PLN8 166 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 SGK494L7N484 410 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 TTC4O95801 387 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 IL1RNP18510 177 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 TRHRP34981 398 aaPredicted RBP11.82□□□□□ -0.52
VEGFA-216ENST00000512683 CCR8P51685 355 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 AP1S2P56377 157 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 TBPL1P62380 186 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 ADORA2A-AS1P86434 159 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 RHAGQ02094 409 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 DHX9Q08211 1270 aaKnown RBP11.82□□□□□ -0.52
VEGFA-216ENST00000512683 USP10Q14694 798 aaKnown RBP11.82□□□□□ -0.52
VEGFA-216ENST00000512683 ABRAXAS2Q15018 415 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 C3AR1Q16581 482 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 SFT2D3Q587I9 215 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 DUPD1Q68J44 220 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 SPINK14Q6IE38 97 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 KIAA0408Q6ZU52 694 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 LANCL3Q6ZV70 420 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 PIWIL4Q7Z3Z4 852 aaKnown RBP11.82□□□□□ -0.52
VEGFA-216ENST00000512683 SLC26A11Q86WA9 606 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 CRLF3Q8IUI8 442 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 SIAH3Q8IW03 269 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 CPNE9Q8IYJ1 553 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 ARMC10Q8N2F6 343 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 ELP5Q8TE02 316 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 TBC1D20Q96BZ9 403 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 PDLIM2Q96JY6 352 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 PWWP2AQ96N64 755 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 VKORC1Q9BQB6 163 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 NAT9Q9BTE0 207 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 LANCL2Q9NS86 450 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 IGSF5Q9NSI5 407 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 ASIC3Q9UHC3 531 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 PDE10AQ9Y233 779 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 NAALAD2Q9Y3Q0 740 aa11.82□□□□□ -0.52
VEGFA-216ENST00000512683 IGHV3-20A0A0C4DH32 117 aa11.81□□□□□ -0.52
VEGFA-216ENST00000512683 GABRR3A8MPY1 467 aa11.81□□□□□ -0.52
VEGFA-216ENST00000512683 PRRG2O14669 202 aa11.81□□□□□ -0.52
VEGFA-216ENST00000512683 NDC80O14777 642 aa11.81□□□□□ -0.52
VEGFA-216ENST00000512683 FANCGO15287 622 aa11.81□□□□□ -0.52
VEGFA-216ENST00000512683 TP73O15350 636 aa11.81□□□□□ -0.52
VEGFA-216ENST00000512683 LCMT2O60294 686 aaKnown RBP11.81□□□□□ -0.52
VEGFA-216ENST00000512683 NEURL1O76050 574 aa11.81□□□□□ -0.52
VEGFA-216ENST00000512683 AHSGP02765 367 aa11.81□□□□□ -0.52
VEGFA-216ENST00000512683 FHP07954 510 aa11.81□□□□□ -0.52
VEGFA-216ENST00000512683 ALOX12P18054 663 aa11.81□□□□□ -0.52
VEGFA-216ENST00000512683 AHRP35869 848 aa11.81□□□□□ -0.52
VEGFA-216ENST00000512683 CYB561P49447 251 aa11.81□□□□□ -0.52
VEGFA-216ENST00000512683 OR4D2P58180 307 aa11.81□□□□□ -0.52
VEGFA-216ENST00000512683 SLC26A5P58743 744 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms