RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 PWP1Q13610 501 aa13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 MEP1AQ16819 746 aa13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 ZXDCQ2QGD7 858 aaPredicted RBP13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 BBS9Q3SYG4 887 aa13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 ZNF766Q5HY98 468 aa13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 HECTD2Q5U5R9 776 aa13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 NIPAL1Q6NVV3 410 aa13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 MTFR2Q6P444 385 aa13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 PAPD4Q6PIY7 484 aaKnown RBP13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 STRA8Q7Z7C7 330 aa13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 AFAP1L2Q8N4X5 818 aa13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 TBC1D19Q8N5T2 526 aa13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 GPATCH11Q8N954 259 aa13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 ZNF740Q8NDX6 193 aa13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 PLPP5Q8NEB5 264 aa13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 ATL1Q8WXF7 558 aa13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 FBXL8Q96CD0 374 aa13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 OR4K3Q96R72 315 aa13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 LPAR4Q99677 370 aa13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 DDX47Q9H0S4 455 aaKnown RBP13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 PPANQ9NQ55 473 aaKnown RBP13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 LANCL2Q9NS86 450 aa13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 SUCOQ9UBS9 1254 aaKnown RBP13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 LRBAP50851 2863 aa13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 TRBC2A0A5B9 178 aa13.84□□□□□ -0.19
CCHCR1-229ENST00000512418 MAGEB17A8MXT2 336 aa13.84□□□□□ -0.19
CCHCR1-229ENST00000512418 PRSS44E7EML9 344 aa13.84□□□□□ -0.19
CCHCR1-229ENST00000512418 GALR3O60755 368 aaPredicted RBP13.84□□□□□ -0.19
CCHCR1-229ENST00000512418 FHP07954 510 aa13.84□□□□□ -0.19
CCHCR1-229ENST00000512418 ALOX12P18054 663 aa13.84□□□□□ -0.19
CCHCR1-229ENST00000512418 JAK1P23458 1154 aa13.84□□□□□ -0.19
CCHCR1-229ENST00000512418 CA7P43166 264 aa13.84□□□□□ -0.19
CCHCR1-229ENST00000512418 PMP22Q01453 160 aa13.84□□□□□ -0.19
CCHCR1-229ENST00000512418 RGS1Q08116 209 aa13.84□□□□□ -0.19
CCHCR1-229ENST00000512418 TUBA3CQ13748 450 aa13.84□□□□□ -0.19
CCHCR1-229ENST00000512418 SFT2D3Q587I9 215 aa13.84□□□□□ -0.19
CCHCR1-229ENST00000512418 TEDDM1Q5T9Z0 273 aa13.84□□□□□ -0.19
CCHCR1-229ENST00000512418 FCRLBQ6BAA4 426 aa13.84□□□□□ -0.19
CCHCR1-229ENST00000512418 FAM45BPQ6NSW5 357 aa13.84□□□□□ -0.19
CCHCR1-229ENST00000512418 TUBA3EQ6PEY2 450 aa13.84□□□□□ -0.19
CCHCR1-229ENST00000512418 CRLF3Q8IUI8 442 aa13.84□□□□□ -0.19
CCHCR1-229ENST00000512418 IGDCC3Q8IVU1 814 aa13.84□□□□□ -0.19
CCHCR1-229ENST00000512418 PDIK1LQ8N165 341 aa13.84□□□□□ -0.19
CCHCR1-229ENST00000512418 SLC5A8Q8N695 610 aa13.84□□□□□ -0.19
CCHCR1-229ENST00000512418 MDS2Q8NDY4 140 aa13.84□□□□□ -0.19
CCHCR1-229ENST00000512418 OR5T3Q8NGG3 340 aa13.84□□□□□ -0.19
CCHCR1-229ENST00000512418 FAM45AQ8TCE6 357 aa13.84□□□□□ -0.19
CCHCR1-229ENST00000512418 MARVELD3Q96A59 401 aa13.84□□□□□ -0.19
CCHCR1-229ENST00000512418 TBC1D20Q96BZ9 403 aa13.84□□□□□ -0.19
CCHCR1-229ENST00000512418 UTP23Q9BRU9 249 aaKnown RBP13.84□□□□□ -0.19
CCHCR1-229ENST00000512418 SLC17A6Q9P2U8 582 aa13.84□□□□□ -0.19
CCHCR1-229ENST00000512418 VWA7Q9Y334 891 aa13.84□□□□□ -0.19
CCHCR1-229ENST00000512418 ARHGAP10A1A4S6 786 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 TTI1O43156 1089 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 ZSCAN12O43309 604 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 GUCA1CO95843 209 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 OR4D2P58180 307 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 SLC26A5P58743 744 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 TAS2R50P59544 299 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 SRSF11Q05519 484 aaKnown RBP13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 ACTN3Q08043 901 aaPredicted RBP13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 ART3Q13508 389 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 CSHL1Q14406 222 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 USP10Q14694 798 aaKnown RBP13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 MORF4L2Q15014 288 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 OR1C1Q15619 314 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 DEFB134Q4QY38 66 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 CATSPEREQ5SY80 951 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 MYO7BQ6PIF6 2116 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 ABHD13Q7L211 337 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 LGI4Q8N135 537 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 HORMAD2Q8N7B1 307 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 NT5CQ8TCD5 201 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 ITLN2Q8WWU7 325 aaPredicted RBP13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 SLC5A11Q8WWX8 675 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 TSLPQ969D9 159 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 NEIL2Q969S2 332 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 LRRC39Q96DD0 335 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 MOCOSQ96EN8 888 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 CCDC120Q96HB5 630 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 SIGLEC12Q96PQ1 595 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 NPAS2Q99743 824 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 OLFM1Q99784 485 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 PLAC1Q9HBJ0 212 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 ANKRD10Q9NXR5 420 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 ZFP69BQ9UJL9 534 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 CHMP2BQ9UQN3 213 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 KLF2Q9Y5W3 355 aaPredicted RBP13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 ABCA12Q86UK0 2595 aa13.83□□□□□ -0.2
CCHCR1-229ENST00000512418 CSMD1Q96PZ7 3565 aa13.82□□□□□ -0.2
CCHCR1-229ENST00000512418 CCL21O00585 134 aa13.82□□□□□ -0.2
CCHCR1-229ENST00000512418 CDK2AP1O14519 115 aa13.82□□□□□ -0.2
CCHCR1-229ENST00000512418 MLYCDO95822 493 aa13.82□□□□□ -0.2
CCHCR1-229ENST00000512418 SERPIND1P05546 499 aa13.82□□□□□ -0.2
CCHCR1-229ENST00000512418 ZNF888P0CJ79 500 aaPredicted RBP13.82□□□□□ -0.2
CCHCR1-229ENST00000512418 CD46P15529 392 aa13.82□□□□□ -0.2
CCHCR1-229ENST00000512418 TCP1P17987 556 aaKnown RBP13.82□□□□□ -0.2
CCHCR1-229ENST00000512418 IVDP26440 423 aa13.82□□□□□ -0.2
CCHCR1-229ENST00000512418 TNFRSF8P28908 595 aa13.82□□□□□ -0.2
CCHCR1-229ENST00000512418 EEF1DP29692 281 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms