RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 LYPLAL1Q5VWZ2 237 aa5.18□□□□□ -1.58
GYPB-212ENST00000511198 ZNF324BQ6AW86 544 aaPredicted RBP5.18□□□□□ -1.58
GYPB-212ENST00000511198 FAAH2Q6GMR7 532 aa5.18□□□□□ -1.58
GYPB-212ENST00000511198 C11orf96Q7Z7L8 435 aa5.18□□□□□ -1.58
GYPB-212ENST00000511198 KIAA1328Q86T90 577 aa5.18□□□□□ -1.58
GYPB-212ENST00000511198 CCDC50Q8IVM0 306 aa5.18□□□□□ -1.58
GYPB-212ENST00000511198 CD302Q8IX05 232 aa5.18□□□□□ -1.58
GYPB-212ENST00000511198 OR2C3Q8N628 320 aa5.18□□□□□ -1.58
GYPB-212ENST00000511198 KDM1BQ8NB78 822 aa5.18□□□□□ -1.58
GYPB-212ENST00000511198 MCUQ8NE86 351 aa5.18□□□□□ -1.58
GYPB-212ENST00000511198 TRIM58Q8NG06 486 aa5.18□□□□□ -1.58
GYPB-212ENST00000511198 OR4D9Q8NGE8 314 aa5.18□□□□□ -1.58
GYPB-212ENST00000511198 CT55Q8WUE5 264 aa5.18□□□□□ -1.58
GYPB-212ENST00000511198 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.18□□□□□ -1.58
GYPB-212ENST00000511198 TSACCQ96A04 125 aaPredicted RBP5.18□□□□□ -1.58
GYPB-212ENST00000511198 PAGE5Q96GU1 130 aa5.18□□□□□ -1.58
GYPB-212ENST00000511198 ZNF347Q96SE7 839 aa5.18□□□□□ -1.58
GYPB-212ENST00000511198 SLC17A9Q9BYT1 436 aa5.18□□□□□ -1.58
GYPB-212ENST00000511198 EDEM3Q9BZQ6 932 aa5.18□□□□□ -1.58
GYPB-212ENST00000511198 THAP9Q9H5L6 903 aa5.18□□□□□ -1.58
GYPB-212ENST00000511198 CXorf56Q9H5V9 222 aa5.18□□□□□ -1.58
GYPB-212ENST00000511198 ACTR5Q9H9F9 607 aaPredicted RBP5.18□□□□□ -1.58
GYPB-212ENST00000511198 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.18□□□□□ -1.58
GYPB-212ENST00000511198 RNF14Q9UBS8 474 aa5.18□□□□□ -1.58
GYPB-212ENST00000511198 UTS2RQ9UKP6 389 aa5.18□□□□□ -1.58
GYPB-212ENST00000511198 DYSFO75923 2080 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 LOC105369274A0A096LPK9 316 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 LOC102723532A0A0G2JNH3 316 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 A6NNC1 897 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 A8MU76 341 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 CHUKO15111 745 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 OGTO15294 1046 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 NUDT21O43809 227 aaKnown RBP5.17□□□□□ -1.58
GYPB-212ENST00000511198 TACC1O75410 805 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 SLCO2B1O94956 709 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 ATP1A1P05023 1023 aaKnown RBP5.17□□□□□ -1.58
GYPB-212ENST00000511198 TRIM49P0CI25 452 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 TRIM49CP0CI26 452 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 HNRNPH1P31943 449 aaKnown RBP5.17□□□□□ -1.58
GYPB-212ENST00000511198 KRT2P35908 639 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 CCT6AP40227 531 aaKnown RBP5.17□□□□□ -1.58
GYPB-212ENST00000511198 HSPA7P48741 367 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 POLD2P49005 469 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 MNAT1P51948 309 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 SMSP52788 366 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 PPARDQ03181 441 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 CBFBQ13951 182 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 SEMA3AQ14563 771 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 ELAVL3Q14576 367 aaKnown RBP5.17□□□□□ -1.58
GYPB-212ENST00000511198 MAPRE1Q15691 268 aaKnown RBP5.17□□□□□ -1.58
GYPB-212ENST00000511198 CLPPQ16740 277 aaPredicted RBP5.17□□□□□ -1.58
GYPB-212ENST00000511198 MPEG1Q2M385 716 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 HSP90AA4PQ58FG1 418 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 C10orf120Q5SQS8 335 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 CCDC122Q5T0U0 273 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 IZUMO3Q5VZ72 239 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 CES4AQ5XG92 561 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 KCTD16Q68DU8 428 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 KLHL10Q6JEL2 608 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 PAQR9Q6ZVX9 377 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 CCDC117Q8IWD4 279 aaPredicted RBP5.17□□□□□ -1.58
GYPB-212ENST00000511198 OR4N4Q8N0Y3 316 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 MREGQ8N565 214 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 EIF1ADQ8N9N8 165 aaKnown RBP5.17□□□□□ -1.58
GYPB-212ENST00000511198 FAM47BQ8NA70 645 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 OR52N4Q8NGI2 321 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 MAGEC3Q8TD91 643 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 ROBO4Q8WZ75 1007 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 P3H4Q92791 437 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 ZNF560Q96MR9 790 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 ALS2CR12Q96Q35 445 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 WDR83Q9BRX9 315 aaKnown RBP5.17□□□□□ -1.58
GYPB-212ENST00000511198 POLDIP3Q9BY77 421 aaKnown RBP5.17□□□□□ -1.58
GYPB-212ENST00000511198 KRTAP2-2Q9BYT5 123 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 ELOVL4Q9GZR5 314 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 MAGEF1Q9HAY2 307 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 TLR8Q9NR97 1041 aaKnown RBP5.17□□□□□ -1.58
GYPB-212ENST00000511198 PDP2Q9P2J9 529 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 KCNN3Q9UGI6 736 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 SNX12Q9UMY4 172 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 C2CD2Q9Y426 696 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 HYOU1Q9Y4L1 999 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 CEP83Q9Y592 693 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 HCFC1P51610 2035 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 CMYA5Q8N3K9 4069 aa5.17□□□□□ -1.58
GYPB-212ENST00000511198 RYR2Q92736 4967 aa5.16□□□□□ -1.58
GYPB-212ENST00000511198 TRPM6Q9BX84 2022 aa5.16□□□□□ -1.58
GYPB-212ENST00000511198 PIKFYVEQ9Y2I7 2098 aa5.16□□□□□ -1.58
GYPB-212ENST00000511198 A0A0U1RQJ8 604 aa5.16□□□□□ -1.58
GYPB-212ENST00000511198 GOLGA6L7A0A1B0GV03 622 aa5.16□□□□□ -1.58
GYPB-212ENST00000511198 PP2D1A8MPX8 630 aa5.16□□□□□ -1.58
GYPB-212ENST00000511198 HMGB1P1B2RPK0 211 aaPredicted RBP5.16□□□□□ -1.58
GYPB-212ENST00000511198 H0YHG0 523 aa5.16□□□□□ -1.58
GYPB-212ENST00000511198 M0QYT0 321 aa5.16□□□□□ -1.58
GYPB-212ENST00000511198 NDUFAB1O14561 156 aa5.16□□□□□ -1.58
GYPB-212ENST00000511198 FPGTO14772 594 aa5.16□□□□□ -1.58
GYPB-212ENST00000511198 HNRNPDLO14979 420 aaKnown RBP5.16□□□□□ -1.58
GYPB-212ENST00000511198 POLR1CO15160 346 aaPredicted RBP5.16□□□□□ -1.58
GYPB-212ENST00000511198 CCNT1O60563 726 aaKnown RBP5.16□□□□□ -1.58
GYPB-212ENST00000511198 BEST1O76090 585 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms