RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 KCNE4Q8WWG9 221 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 MTFMTQ96DP5 389 aaKnown RBP9.91□□□□□ -0.82
NR1I3-227ENST00000510951 ZNF382Q96SR6 550 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 SARGQ9BW04 601 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 GATA5Q9BWX5 397 aaPredicted RBP9.91□□□□□ -0.82
NR1I3-227ENST00000510951 ACBD3Q9H3P7 528 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 AKIRIN1Q9H9L7 192 aaPredicted RBP9.91□□□□□ -0.82
NR1I3-227ENST00000510951 NKIRAS1Q9NYS0 192 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 DKK4Q9UBT3 224 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 ACSL6Q9UKU0 697 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 ZNF490Q9ULM2 529 aaPredicted RBP9.91□□□□□ -0.82
NR1I3-227ENST00000510951 RAXQ9Y2V3 346 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 A0A0A6YYC8 382 aaPredicted RBP9.9□□□□□ -0.82
NR1I3-227ENST00000510951 A0A0G2JN53 185 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 ZNF860A6NHJ4 632 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 C4orf51C9J302 202 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 I3L1I5 382 aaPredicted RBP9.9□□□□□ -0.82
NR1I3-227ENST00000510951 MEN1O00255 615 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 TXNDC9O14530 226 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 UBFD1O14562 309 aaKnown RBP9.9□□□□□ -0.82
NR1I3-227ENST00000510951 KLK10O43240 276 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 MLYCDO95822 493 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 B3GALT4O96024 378 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 KLK3P07288 261 aaPredicted RBP9.9□□□□□ -0.82
NR1I3-227ENST00000510951 NEFHP12036 1026 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 ITGAXP20702 1163 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 HNRNPH1P31943 449 aaKnown RBP9.9□□□□□ -0.82
NR1I3-227ENST00000510951 GCGRP47871 477 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 OR1D4P47884 311 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 NEK2P51955 445 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 ARSFP54793 590 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 PCDH1Q08174 1060 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 ASPHQ12797 758 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 E2F2Q14209 437 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 CHI3L2Q15782 390 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 NDUFA9Q16795 377 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 MUM1Q2TAK8 710 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 FAM214AQ32MH5 1076 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 SGO1Q5FBB7 561 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 TCHHL1Q5QJ38 904 aaPredicted RBP9.9□□□□□ -0.82
NR1I3-227ENST00000510951 TMEM214Q6NUQ4 689 aaKnown RBP9.9□□□□□ -0.82
NR1I3-227ENST00000510951 DTX1Q86Y01 620 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 NUDCD3Q8IVD9 361 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 ARHGEF39Q8N4T4 335 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 L3MBTL4Q8NA19 623 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 ZNF248Q8NDW4 579 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 TRPV3Q8NET8 790 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 TTLQ8NG68 377 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 OR7G3Q8NG95 312 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 HUS1BQ8NHY5 278 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 NT5CQ8TCD5 201 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 PROKR1Q8TCW9 393 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 CREB3L4Q8TEY5 395 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 AGAP11Q8TF27 550 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 CT55Q8WUE5 264 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 SREK1Q8WXA9 508 aaKnown RBP9.9□□□□□ -0.82
NR1I3-227ENST00000510951 NKD1Q969G9 470 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 UBE2E3Q969T4 207 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 TM4SF19Q96DZ7 209 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 GBP5Q96PP8 586 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 KCNA7Q96RP8 456 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 HBEGFQ99075 208 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 MTERF1Q99551 399 aaKnown RBP9.9□□□□□ -0.82
NR1I3-227ENST00000510951 NTMT1Q9BV86 223 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 SPRY4Q9C004 299 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 PITHD1Q9GZP4 211 aaPredicted RBP9.9□□□□□ -0.82
NR1I3-227ENST00000510951 AICDAQ9GZX7 198 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 CHST8Q9H2A9 424 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 KLHL31Q9H511 634 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 NT5DC2Q9H857 520 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 MID1IP1Q9NPA3 183 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 LHX9Q9NQ69 397 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 ZNF225Q9UK10 706 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 CROTQ9UKG9 612 aa9.9□□□□□ -0.82
NR1I3-227ENST00000510951 ACACBO00763 2458 aa9.89□□□□□ -0.83
NR1I3-227ENST00000510951 LOC101059948A0A1B0GTJ6 334 aa9.89□□□□□ -0.83
NR1I3-227ENST00000510951 HMGB1P1B2RPK0 211 aaPredicted RBP9.89□□□□□ -0.83
NR1I3-227ENST00000510951 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.89□□□□□ -0.83
NR1I3-227ENST00000510951 SAP18O00422 153 aaKnown RBP9.89□□□□□ -0.83
NR1I3-227ENST00000510951 ERI3O43414 337 aaKnown RBP9.89□□□□□ -0.83
NR1I3-227ENST00000510951 FOXS1O43638 330 aa9.89□□□□□ -0.83
NR1I3-227ENST00000510951 CRCPO75575 148 aa9.89□□□□□ -0.83
NR1I3-227ENST00000510951 CLEC3AO75596 197 aa9.89□□□□□ -0.83
NR1I3-227ENST00000510951 TGFB1P01137 390 aa9.89□□□□□ -0.83
NR1I3-227ENST00000510951 CAPNS1P04632 268 aa9.89□□□□□ -0.83
NR1I3-227ENST00000510951 CAPN1P07384 714 aa9.89□□□□□ -0.83
NR1I3-227ENST00000510951 CHRNGP07510 517 aa9.89□□□□□ -0.83
NR1I3-227ENST00000510951 CCNYL3P0C7X3 344 aa9.89□□□□□ -0.83
NR1I3-227ENST00000510951 DHRS4L1P0CG22 281 aa9.89□□□□□ -0.83
NR1I3-227ENST00000510951 AGXTP21549 392 aa9.89□□□□□ -0.83
NR1I3-227ENST00000510951 BGNP21810 368 aa9.89□□□□□ -0.83
NR1I3-227ENST00000510951 HMOX2P30519 316 aa9.89□□□□□ -0.83
NR1I3-227ENST00000510951 DLSTP36957 453 aa9.89□□□□□ -0.83
NR1I3-227ENST00000510951 STAT5AP42229 794 aa9.89□□□□□ -0.83
NR1I3-227ENST00000510951 HTR6P50406 440 aa9.89□□□□□ -0.83
NR1I3-227ENST00000510951 FOXA1P55317 472 aa9.89□□□□□ -0.83
NR1I3-227ENST00000510951 PKNOX1P55347 436 aa9.89□□□□□ -0.83
NR1I3-227ENST00000510951 WDR4P57081 412 aaKnown RBP9.89□□□□□ -0.83
NR1I3-227ENST00000510951 FOXL2P58012 376 aa9.89□□□□□ -0.83
NR1I3-227ENST00000510951 RAB8AP61006 207 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms