RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 TUBB6Q9BUF5 446 aa21.7■■□□□ 1.06
SNF8-209ENST00000510558 PELI2Q9HAT8 420 aa21.7■■□□□ 1.06
SNF8-209ENST00000510558 TXNDC16Q9P2K2 825 aa21.7■■□□□ 1.06
SNF8-209ENST00000510558 ZFP69BQ9UJL9 534 aa21.7■■□□□ 1.06
SNF8-209ENST00000510558 SLC22A14Q9Y267 594 aa21.7■■□□□ 1.06
SNF8-209ENST00000510558 HIVEP3Q5T1R4 2406 aa21.7■■□□□ 1.06
SNF8-209ENST00000510558 BLACEA4D250 179 aa21.69■■□□□ 1.06
SNF8-209ENST00000510558 ZNF860A6NHJ4 632 aa21.69■■□□□ 1.06
SNF8-209ENST00000510558 WISP3O95389 354 aaPredicted RBP21.69■■□□□ 1.06
SNF8-209ENST00000510558 AHRP35869 848 aa21.69■■□□□ 1.06
SNF8-209ENST00000510558 TSFMP43897 325 aaKnown RBP21.69■■□□□ 1.06
SNF8-209ENST00000510558 HNMTP50135 292 aa21.69■■□□□ 1.06
SNF8-209ENST00000510558 RGS1Q08116 209 aa21.69■■□□□ 1.06
SNF8-209ENST00000510558 TLR1Q15399 786 aa21.69■■□□□ 1.06
SNF8-209ENST00000510558 B3GNTL1Q67FW5 361 aaPredicted RBP21.69■■□□□ 1.06
SNF8-209ENST00000510558 NT5CQ8TCD5 201 aa21.69■■□□□ 1.06
SNF8-209ENST00000510558 BARD1Q99728 777 aaKnown RBP21.69■■□□□ 1.06
SNF8-209ENST00000510558 CPNE1Q99829 537 aa21.69■■□□□ 1.06
SNF8-209ENST00000510558 AIF1LQ9BQI0 150 aa21.69■■□□□ 1.06
SNF8-209ENST00000510558 DERL2Q9GZP9 239 aa21.69■■□□□ 1.06
SNF8-209ENST00000510558 RAB17Q9H0T7 212 aa21.69■■□□□ 1.06
SNF8-209ENST00000510558 CAB39LQ9H9S4 337 aa21.69■■□□□ 1.06
SNF8-209ENST00000510558 C19orf25Q9UFG5 118 aaPredicted RBP21.69■■□□□ 1.06
SNF8-209ENST00000510558 KCNE2Q9Y6J6 123 aa21.69■■□□□ 1.06
SNF8-209ENST00000510558 OR2W5A6NFC9 320 aa21.68■■□□□ 1.06
SNF8-209ENST00000510558 FAM159BA6NKW6 160 aa21.68■■□□□ 1.06
SNF8-209ENST00000510558 WFS1O76024 890 aa21.68■■□□□ 1.06
SNF8-209ENST00000510558 CBX6O95503 412 aa21.68■■□□□ 1.06
SNF8-209ENST00000510558 UQCRHP07919 91 aa21.68■■□□□ 1.06
SNF8-209ENST00000510558 ITGAMP11215 1152 aa21.68■■□□□ 1.06
SNF8-209ENST00000510558 ICAM2P13598 275 aa21.68■■□□□ 1.06
SNF8-209ENST00000510558 ALOX12P18054 663 aa21.68■■□□□ 1.06
SNF8-209ENST00000510558 PLTPP55058 493 aa21.68■■□□□ 1.06
SNF8-209ENST00000510558 AP2B1P63010 937 aa21.68■■□□□ 1.06
SNF8-209ENST00000510558 CAV1Q03135 178 aa21.68■■□□□ 1.06
SNF8-209ENST00000510558 CDC16Q13042 620 aa21.68■■□□□ 1.06
SNF8-209ENST00000510558 USP10Q14694 798 aaKnown RBP21.68■■□□□ 1.06
SNF8-209ENST00000510558 NXPE4Q6UWF7 544 aa21.68■■□□□ 1.06
SNF8-209ENST00000510558 C3orf62Q6ZUJ4 267 aa21.68■■□□□ 1.06
SNF8-209ENST00000510558 CYS1Q717R9 158 aa21.68■■□□□ 1.06
SNF8-209ENST00000510558 CPEB2Q7Z5Q1 589 aaKnown RBP21.68■■□□□ 1.06
SNF8-209ENST00000510558 AMER2Q8N7J2 671 aa21.68■■□□□ 1.06
SNF8-209ENST00000510558 CATSPER1Q8NEC5 780 aa21.68■■□□□ 1.06
SNF8-209ENST00000510558 OR5T3Q8NGG3 340 aa21.68■■□□□ 1.06
SNF8-209ENST00000510558 FBXO25Q8TCJ0 367 aa21.68■■□□□ 1.06
SNF8-209ENST00000510558 TSPAN17Q96FV3 270 aa21.68■■□□□ 1.06
SNF8-209ENST00000510558 PEX11GQ96HA9 241 aa21.68■■□□□ 1.06
SNF8-209ENST00000510558 GPR22Q99680 433 aa21.68■■□□□ 1.06
SNF8-209ENST00000510558 RBBP8Q99708 897 aa21.68■■□□□ 1.06
SNF8-209ENST00000510558 RBCK1Q9BYM8 510 aa21.68■■□□□ 1.06
SNF8-209ENST00000510558 UNKQ9C0B0 810 aaKnown RBP21.68■■□□□ 1.06
SNF8-209ENST00000510558 PHACTR1Q9C0D0 580 aa21.68■■□□□ 1.06
SNF8-209ENST00000510558 AGPAT4Q9NRZ5 378 aa21.68■■□□□ 1.06
SNF8-209ENST00000510558 USP9YO00507 2555 aaPredicted RBP21.67■■□□□ 1.06
SNF8-209ENST00000510558 IGHV3-20A0A0C4DH32 117 aa21.67■■□□□ 1.06
SNF8-209ENST00000510558 DYTNA2CJ06 578 aa21.67■■□□□ 1.06
SNF8-209ENST00000510558 PHGDHO43175 533 aaKnown RBP21.67■■□□□ 1.06
SNF8-209ENST00000510558 GALR3O60755 368 aaPredicted RBP21.67■■□□□ 1.06
SNF8-209ENST00000510558 SEMA7AO75326 666 aa21.67■■□□□ 1.06
SNF8-209ENST00000510558 SEC24DO94855 1032 aaPredicted RBP21.67■■□□□ 1.06
SNF8-209ENST00000510558 WDR47O94967 919 aa21.67■■□□□ 1.06
SNF8-209ENST00000510558 C1QAP02745 245 aa21.67■■□□□ 1.06
SNF8-209ENST00000510558 GSTA2P09210 222 aa21.67■■□□□ 1.06
SNF8-209ENST00000510558 IL10P22301 178 aa21.67■■□□□ 1.06
SNF8-209ENST00000510558 GP5P40197 560 aa21.67■■□□□ 1.06
SNF8-209ENST00000510558 AGTR2P50052 363 aa21.67■■□□□ 1.06
SNF8-209ENST00000510558 GPX6P59796 221 aa21.67■■□□□ 1.06
SNF8-209ENST00000510558 SKP1P63208 163 aa21.67■■□□□ 1.06
SNF8-209ENST00000510558 ARG2P78540 354 aa21.67■■□□□ 1.06
SNF8-209ENST00000510558 C18orf21Q32NC0 220 aaPredicted RBP21.67■■□□□ 1.06
SNF8-209ENST00000510558 DEFB134Q4QY38 66 aa21.67■■□□□ 1.06
SNF8-209ENST00000510558 ZNF572Q7Z3I7 529 aaPredicted RBP21.67■■□□□ 1.06
SNF8-209ENST00000510558 ANKRD37Q7Z713 158 aa21.67■■□□□ 1.06
SNF8-209ENST00000510558 CCDC25Q86WR0 208 aa21.67■■□□□ 1.06
SNF8-209ENST00000510558 SPATA6LQ8N4H0 392 aa21.67■■□□□ 1.06
SNF8-209ENST00000510558 ANKRD53Q8N9V6 530 aa21.67■■□□□ 1.06
SNF8-209ENST00000510558 PRR7Q8TB68 274 aa21.67■■□□□ 1.06
SNF8-209ENST00000510558 RHBDF1Q96CC6 855 aa21.67■■□□□ 1.06
SNF8-209ENST00000510558 PSMG3-AS1Q96PY0 264 aa21.67■■□□□ 1.06
SNF8-209ENST00000510558 OR1F2PQ96R84 312 aa21.67■■□□□ 1.06
SNF8-209ENST00000510558 SPTAN1Q13813 2472 aaKnown RBP21.66■■□□□ 1.06
SNF8-209ENST00000510558 CTAGE15A4D2H0 777 aa21.66■■□□□ 1.06
SNF8-209ENST00000510558 NCF1BA6NI72 391 aaPredicted RBP21.66■■□□□ 1.06
SNF8-209ENST00000510558 NCF1CA8MVU1 366 aaPredicted RBP21.66■■□□□ 1.06
SNF8-209ENST00000510558 B3GALT4O96024 378 aa21.66■■□□□ 1.06
SNF8-209ENST00000510558 ZNF888P0CJ79 500 aaPredicted RBP21.66■■□□□ 1.06
SNF8-209ENST00000510558 CCDC166P0CW27 439 aa21.66■■□□□ 1.06
SNF8-209ENST00000510558 NCF1P14598 390 aaPredicted RBP21.66■■□□□ 1.06
SNF8-209ENST00000510558 STMN1P16949 149 aa21.66■■□□□ 1.06
SNF8-209ENST00000510558 GDF5P43026 501 aa21.66■■□□□ 1.06
SNF8-209ENST00000510558 SLC6A12P48065 614 aa21.66■■□□□ 1.06
SNF8-209ENST00000510558 RBBP5Q15291 538 aaKnown RBP21.66■■□□□ 1.06
SNF8-209ENST00000510558 TGFBIQ15582 683 aa21.66■■□□□ 1.06
SNF8-209ENST00000510558 TRADDQ15628 312 aa21.66■■□□□ 1.06
SNF8-209ENST00000510558 NIPAL1Q6NVV3 410 aa21.66■■□□□ 1.06
SNF8-209ENST00000510558 ABHD13Q7L211 337 aa21.66■■□□□ 1.06
SNF8-209ENST00000510558 CTAGE6Q86UF2 777 aa21.66■■□□□ 1.06
SNF8-209ENST00000510558 CTAGE3PQ8IX95 158 aa21.66■■□□□ 1.06
SNF8-209ENST00000510558 KLHDC8AQ8IYD2 350 aa21.66■■□□□ 1.06
SNF8-209ENST00000510558 TRPV3Q8NET8 790 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms