RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 SLC5A8Q8N695 610 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 POU5F2Q8N7G0 328 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 ZNF781Q8N8C0 355 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 OR8K5Q8NH50 307 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 PHF21AQ96BD5 680 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 OR6C1Q96RD1 312 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 MYLK2Q9H1R3 596 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 NEK6Q9HC98 313 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 MBNL1Q9NR56 388 aaKnown RBP4.94□□□□□ -1.62
PHF3-210ENST00000509876 TREX1Q9NSU2 369 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 GALPQ9UBC7 116 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 OAS3Q9Y6K5 1087 aaKnown RBP4.94□□□□□ -1.62
PHF3-210ENST00000509876 MAU2Q9Y6X3 613 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 MYH10P35580 1976 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 ZNF860A6NHJ4 632 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 TLX3O43711 291 aaPredicted RBP4.94□□□□□ -1.62
PHF3-210ENST00000509876 DLX3O60479 287 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 SRPX2O60687 465 aaPredicted RBP4.94□□□□□ -1.62
PHF3-210ENST00000509876 DEAF1O75398 565 aaPredicted RBP4.94□□□□□ -1.62
PHF3-210ENST00000509876 P04436 131 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 SLC7A1P30825 629 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 FEN1P39748 380 aaKnown RBP4.94□□□□□ -1.62
PHF3-210ENST00000509876 SH3BGRP55822 239 aaPredicted RBP4.94□□□□□ -1.62
PHF3-210ENST00000509876 SLAMF1Q13291 335 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 ADGRE1Q14246 886 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 NSDHLQ15738 373 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 METTL21CQ5VZV1 264 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 ALKBH2Q6NS38 261 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 KIAA1211LQ6NV74 962 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 METTL2BQ6P1Q9 378 aaKnown RBP4.94□□□□□ -1.62
PHF3-210ENST00000509876 EIF3MQ7L2H7 374 aaKnown RBP4.94□□□□□ -1.62
PHF3-210ENST00000509876 SPRED2Q7Z698 418 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 RNF168Q8IYW5 571 aaPredicted RBP4.94□□□□□ -1.62
PHF3-210ENST00000509876 FAM47BQ8NA70 645 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 C11orf65Q8NCR3 313 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 PHF10Q8WUB8 498 aaKnown RBP4.94□□□□□ -1.62
PHF3-210ENST00000509876 NAT14Q8WUY8 206 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 SMPDL3BQ92485 455 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 FUBP1Q96AE4 644 aaKnown RBP4.94□□□□□ -1.62
PHF3-210ENST00000509876 LOXL4Q96JB6 756 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 PDFQ9HBH1 243 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 B3GAT2Q9NPZ5 323 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 RPRD1BQ9NQG5 326 aaKnown RBP4.94□□□□□ -1.62
PHF3-210ENST00000509876 ZCCHC3Q9NUD5 404 aaKnown RBP4.94□□□□□ -1.62
PHF3-210ENST00000509876 MOCS1Q9NZB8 636 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 ARMCX1Q9P291 453 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 P2RX2Q9UBL9 471 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 PCDHGA5Q9Y5G8 931 aa4.94□□□□□ -1.62
PHF3-210ENST00000509876 IGHV1OR15-9A0A0B4J2B8 117 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 UGDHO60701 494 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 GPR37L1O60883 481 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 CDC123O75794 336 aaPredicted RBP4.93□□□□□ -1.62
PHF3-210ENST00000509876 SYNGR4O95473 234 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 TOP3BO95985 862 aaKnown RBP4.93□□□□□ -1.62
PHF3-210ENST00000509876 LDLRP01130 860 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 ICAM2P13598 275 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 NQO1P15559 274 aaKnown RBP4.93□□□□□ -1.62
PHF3-210ENST00000509876 BMP7P18075 431 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 RORAP35398 523 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 HOXD12P35452 270 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 MAGEA6P43360 314 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 CDKN1CP49918 316 aaPredicted RBP4.93□□□□□ -1.62
PHF3-210ENST00000509876 EMP2P54851 167 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 RBPJQ06330 500 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 ZNF33BQ06732 778 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 ABHD18Q0P651 414 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 ENPP2Q13822 863 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 UBAP2LQ14157 1087 aaKnown RBP4.93□□□□□ -1.62
PHF3-210ENST00000509876 SIX1Q15475 284 aaPredicted RBP4.93□□□□□ -1.62
PHF3-210ENST00000509876 HENMT1Q5T8I9 393 aaKnown RBP4.93□□□□□ -1.62
PHF3-210ENST00000509876 DUS1LQ6P1R4 473 aaKnown RBP4.93□□□□□ -1.62
PHF3-210ENST00000509876 NUP54Q7Z3B4 507 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 BPHLQ86WA6 291 aaPredicted RBP4.93□□□□□ -1.62
PHF3-210ENST00000509876 COMMD2Q86X83 199 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 RASGEF1AQ8N9B8 481 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 WDR36Q8NI36 951 aaKnown RBP4.93□□□□□ -1.62
PHF3-210ENST00000509876 ASB15Q8WXK1 588 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 EZH1Q92800 747 aaPredicted RBP4.93□□□□□ -1.62
PHF3-210ENST00000509876 PEX11GQ96HA9 241 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 ZPBPQ9BS86 351 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 TBC1D10AQ9BXI6 508 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 MUC13Q9H3R2 512 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 LRRN3Q9H3W5 708 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 ZNF304Q9HCX3 659 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 INTS6Q9UL03 887 aaKnown RBP4.93□□□□□ -1.62
PHF3-210ENST00000509876 WBP11Q9Y2W2 641 aaKnown RBP4.93□□□□□ -1.62
PHF3-210ENST00000509876 SRRM3A6NNA2 597 aaPredicted RBP4.93□□□□□ -1.62
PHF3-210ENST00000509876 SLC22A2O15244 555 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 NRP2O60462 931 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 EDF1O60869 148 aaKnown RBP4.93□□□□□ -1.62
PHF3-210ENST00000509876 PRSS56P0CW18 603 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 UGT2B7P16662 529 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 IL7RP16871 459 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 CALRP27797 417 aaKnown RBP4.93□□□□□ -1.62
PHF3-210ENST00000509876 AOAHP28039 575 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 HNRNPH1P31943 449 aaKnown RBP4.93□□□□□ -1.62
PHF3-210ENST00000509876 NUBP1P53384 320 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 OR1D5P58170 312 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 SPIBQ01892 262 aa4.93□□□□□ -1.62
PHF3-210ENST00000509876 PLCXD2Q0VAA5 305 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms