RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 SGPP1Q9BX95 441 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 CHST11Q9NPF2 352 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 KLHL42Q9P2K6 505 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 ITGB1BP2Q9UKP3 347 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 CLDN16Q9Y5I7 305 aa12.56□□□□□ -0.4
DDX41-210ENST00000509576 TXNDC9O14530 226 aa12.55□□□□□ -0.4
DDX41-210ENST00000509576 ASNA1O43681 348 aa12.55□□□□□ -0.4
DDX41-210ENST00000509576 BANF1O75531 89 aa12.55□□□□□ -0.4
DDX41-210ENST00000509576 CLDN14O95500 239 aa12.55□□□□□ -0.4
DDX41-210ENST00000509576 UQCRHP07919 91 aa12.55□□□□□ -0.4
DDX41-210ENST00000509576 SP1P08047 785 aa12.55□□□□□ -0.4
DDX41-210ENST00000509576 NPPBP16860 134 aa12.55□□□□□ -0.4
DDX41-210ENST00000509576 AGAP20933 346 aa12.55□□□□□ -0.4
DDX41-210ENST00000509576 TPP2P29144 1249 aaPredicted RBP12.55□□□□□ -0.4
DDX41-210ENST00000509576 CDKN2DP55273 166 aa12.55□□□□□ -0.4
DDX41-210ENST00000509576 RPS15AP62244 130 aaKnown RBP12.55□□□□□ -0.4
DDX41-210ENST00000509576 BTG2P78543 158 aa12.55□□□□□ -0.4
DDX41-210ENST00000509576 HYAL2Q12891 473 aa12.55□□□□□ -0.4
DDX41-210ENST00000509576 GPS1Q13098 491 aa12.55□□□□□ -0.4
DDX41-210ENST00000509576 NDUFA9Q16795 377 aa12.55□□□□□ -0.4
DDX41-210ENST00000509576 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.55□□□□□ -0.41e-5■□□□□ 9.3
DDX41-210ENST00000509576 THEMIS2Q5TEJ8 643 aa12.55□□□□□ -0.4
DDX41-210ENST00000509576 AGTRAPQ6RW13 159 aa12.55□□□□□ -0.4
DDX41-210ENST00000509576 ASPGQ86U10 573 aa12.55□□□□□ -0.4
DDX41-210ENST00000509576 RPRMLQ8N4K4 120 aa12.55□□□□□ -0.4
DDX41-210ENST00000509576 NFAM1Q8NET5 270 aaPredicted RBP12.55□□□□□ -0.4
DDX41-210ENST00000509576 AGAP11Q8TF27 550 aa12.55□□□□□ -0.4
DDX41-210ENST00000509576 METTL21AQ8WXB1 218 aa12.55□□□□□ -0.4
DDX41-210ENST00000509576 PYCR2Q96C36 320 aa12.55□□□□□ -0.4
DDX41-210ENST00000509576 ENKD1Q9H0I2 346 aa12.55□□□□□ -0.4
DDX41-210ENST00000509576 CDCP1Q9H5V8 836 aa12.55□□□□□ -0.4
DDX41-210ENST00000509576 CCDC177Q9NQR7 707 aaPredicted RBP12.55□□□□□ -0.4
DDX41-210ENST00000509576 ZNF223Q9UK11 482 aaPredicted RBP12.55□□□□□ -0.4
DDX41-210ENST00000509576 ITPR3Q14573 2671 aa12.55□□□□□ -0.4
DDX41-210ENST00000509576 CTAGE9A4FU28 777 aa12.54□□□□□ -0.4
DDX41-210ENST00000509576 MAGEB17A8MXT2 336 aa12.54□□□□□ -0.4
DDX41-210ENST00000509576 TGFBR3LH3BV60 316 aa12.54□□□□□ -0.4
DDX41-210ENST00000509576 TTI1O43156 1089 aa12.54□□□□□ -0.4
DDX41-210ENST00000509576 NME2P1O60361 137 aa12.54□□□□□ -0.4
DDX41-210ENST00000509576 GALR3O60755 368 aaPredicted RBP12.54□□□□□ -0.4
DDX41-210ENST00000509576 CYC1P08574 325 aa12.54□□□□□ -0.4
DDX41-210ENST00000509576 FREM3P0C091 2139 aa12.54□□□□□ -0.4
DDX41-210ENST00000509576 ENO3P13929 434 aaPredicted RBP12.54□□□□□ -0.4
DDX41-210ENST00000509576 NME2P22392 152 aa12.54□□□□□ -0.4
DDX41-210ENST00000509576 RFC3P40938 356 aa12.54□□□□□ -0.4
DDX41-210ENST00000509576 RIPPLY3P57055 190 aa12.54□□□□□ -0.4
DDX41-210ENST00000509576 ALDH6A1Q02252 535 aaKnown RBP12.54□□□□□ -0.4
DDX41-210ENST00000509576 NAE1Q13564 534 aa12.54□□□□□ -0.4
DDX41-210ENST00000509576 MEP1AQ16819 746 aa12.54□□□□□ -0.4
DDX41-210ENST00000509576 CAPN13Q6MZZ7 669 aaPredicted RBP12.54□□□□□ -0.4
DDX41-210ENST00000509576 PAQR3Q6TCH7 311 aa12.54□□□□□ -0.4
DDX41-210ENST00000509576 GSTA5Q7RTV2 222 aa12.54□□□□□ -0.4
DDX41-210ENST00000509576 MFSD9Q8NBP5 474 aa12.54□□□□□ -0.4
DDX41-210ENST00000509576 OR4K1Q8NGD4 311 aa12.54□□□□□ -0.4
DDX41-210ENST00000509576 SUN3Q8TAQ9 357 aa12.54□□□□□ -0.4
DDX41-210ENST00000509576 MS4A14Q96JA4 679 aa12.54□□□□□ -0.4
DDX41-210ENST00000509576 UTP23Q9BRU9 249 aaKnown RBP12.54□□□□□ -0.4
DDX41-210ENST00000509576 NPDC1Q9NQX5 325 aaPredicted RBP12.54□□□□□ -0.4
DDX41-210ENST00000509576 FBXO5Q9UKT4 447 aa12.54□□□□□ -0.4
DDX41-210ENST00000509576 ZKSCAN5Q9Y2L8 839 aa12.54□□□□□ -0.4
DDX41-210ENST00000509576 SLC22A7Q9Y694 548 aa12.54□□□□□ -0.4
DDX41-210ENST00000509576 ARHGAP21Q5T5U3 1957 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 IGKV3D-11A0A0A0MRZ8 115 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 ZNF839A8K0R7 811 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 CHST10O43529 356 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 ZBTB14O43829 449 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 KRT14P02533 472 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 IGFBP2P18065 325 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 EEF1DP29692 281 aaKnown RBP12.53□□□□□ -0.4
DDX41-210ENST00000509576 AGTR2P50052 363 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 DHX9Q08211 1270 aaKnown RBP12.53□□□□□ -0.4
DDX41-210ENST00000509576 NSDHLQ15738 373 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 EXT1Q16394 746 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 LONRF1Q17RB8 773 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 TTLL9Q3SXZ7 439 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 DEFB134Q4QY38 66 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 HSP90AA5PQ58FG0 334 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 CATSPEREQ5SY80 951 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 SLC25A25Q6KCM7 469 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 MTFR2Q6P444 385 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 CASC4Q6P4E1 433 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 C4orf22Q6V702 233 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 IGDCC3Q8IVU1 814 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 NAT8LQ8N9F0 302 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 ANKRD53Q8N9V6 530 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 ABHD11Q8NFV4 315 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 SLC13A3Q8WWT9 602 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 MAGED4Q96JG8 741 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 EBNA1BP2Q99848 306 aaKnown RBP12.53□□□□□ -0.4
DDX41-210ENST00000509576 WDR83Q9BRX9 315 aaKnown RBP12.53□□□□□ -0.4
DDX41-210ENST00000509576 SARGQ9BW04 601 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 KLHL31Q9H511 634 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 TRIM45Q9H8W5 580 aaPredicted RBP12.53□□□□□ -0.4
DDX41-210ENST00000509576 ANKHQ9HCJ1 492 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 NECTIN3Q9NQS3 549 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 LRFN1Q9P244 771 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 C19orf25Q9UFG5 118 aaPredicted RBP12.53□□□□□ -0.4
DDX41-210ENST00000509576 TEKT2Q9UIF3 430 aa12.53□□□□□ -0.4
DDX41-210ENST00000509576 PRRC2AP48634 2157 aaKnown RBP12.53□□□□□ -0.4
DDX41-210ENST00000509576 AP3B1O00203 1094 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms