RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 RCN2Q14257 317 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 HKDC1Q2TB90 917 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 C18orf21Q32NC0 220 aaPredicted RBP8.7□□□□□ -1.02
NUP54-207ENST00000508583 FBXO48Q5FWF7 155 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 CFAP157Q5JU67 520 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 BEND6Q5SZJ8 279 aaPredicted RBP8.7□□□□□ -1.02
NUP54-207ENST00000508583 PRAMEF17Q5VTA0 474 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 C1orf189Q5VU69 101 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 ZNF385CQ66K41 422 aaPredicted RBP8.7□□□□□ -1.02
NUP54-207ENST00000508583 TMEM214Q6NUQ4 689 aaKnown RBP8.7□□□□□ -1.02
NUP54-207ENST00000508583 INO80CQ6PI98 192 aaPredicted RBP8.7□□□□□ -1.02
NUP54-207ENST00000508583 ZYG11AQ6WRX3 759 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 GOLGA7Q7Z5G4 137 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 VN1R4Q7Z5H5 301 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 VASH2Q86V25 355 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 PLD3Q8IV08 490 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.7□□□□□ -1.02
NUP54-207ENST00000508583 IQCKQ8N0W5 287 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 CYP4X1Q8N118 509 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 C4orf33Q8N1A6 199 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 SLC38A9Q8NBW4 561 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 SNRNP27Q8WVK2 155 aaKnown RBP8.7□□□□□ -1.02
NUP54-207ENST00000508583 THAP4Q8WY91 577 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 CCT6BQ92526 530 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 COL26A1Q96A83 441 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 ESAMQ96AP7 390 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 TM4SF19Q96DZ7 209 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 PGM2Q96G03 612 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 FAR2Q96K12 515 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 C10orf90Q96M02 699 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 ROGDIQ9GZN7 287 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 SLC26A1Q9H2B4 701 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 CENPHQ9H3R5 247 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 ACTL8Q9H568 366 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 SSU72Q9NP77 194 aaKnown RBP8.7□□□□□ -1.02
NUP54-207ENST00000508583 MKKSQ9NPJ1 570 aaPredicted RBP8.7□□□□□ -1.02
NUP54-207ENST00000508583 RRAGDQ9NQL2 400 aaPredicted RBP8.7□□□□□ -1.02
NUP54-207ENST00000508583 STARD5Q9NSY2 213 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 C14orf105Q9NVL8 296 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 PCTPQ9UKL6 214 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 FARSAQ9Y285 508 aaKnown RBP8.7□□□□□ -1.02
NUP54-207ENST00000508583 TSC22D4Q9Y3Q8 395 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 MAP4K5Q9Y4K4 846 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 LAMA5O15230 3695 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 LOC101059948A0A1B0GTJ6 334 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 SYNDIG1LA6NDD5 238 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 H0YIV9 168 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 P2RX6O15547 441 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 EFSO43281 561 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 LCMT2O60294 686 aaKnown RBP8.69□□□□□ -1.02
NUP54-207ENST00000508583 PLIN3O60664 434 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 CREG1O75629 220 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 SUPT7LO94864 414 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 SIX3O95343 332 aaPredicted RBP8.69□□□□□ -1.02
NUP54-207ENST00000508583 PROCP04070 461 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 ITGB2P05107 769 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 CPA3P15088 417 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 IMPDH1P20839 514 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 FOLR3P41439 243 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 PIK3CBP42338 1070 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 ARFIP1P53367 373 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 DNAJB13P59910 316 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 CXADRP78310 365 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 MEF2AQ02078 507 aaPredicted RBP8.69□□□□□ -1.02
NUP54-207ENST00000508583 LCP2Q13094 533 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 IFT88Q13099 833 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 RBBP7Q16576 425 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 GGTA1PQ4G0N0 100 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 TMEM35AQ53FP2 167 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 ZNF678Q5SXM1 525 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 MLIPQ5VWP3 458 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 TTC19Q6DKK2 380 aaPredicted RBP8.69□□□□□ -1.02
NUP54-207ENST00000508583 TRIM40Q6P9F5 258 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 FAM198BQ6UWH4 519 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 SH2D5Q6ZV89 423 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 CHSY3Q70JA7 882 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 OVCH1Q7RTY7 1134 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 GPR155Q7Z3F1 870 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 RAB43Q86YS6 212 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 LAS2Q8IYD9 372 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 GOLGA6L1Q8N7Z2 621 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 ENDOVQ8N8Q3 282 aaKnown RBP8.69□□□□□ -1.02
NUP54-207ENST00000508583 BANPQ8N9N5 519 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 L3MBTL4Q8NA19 623 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 ADAMTS18Q8TE60 1221 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 GAL3ST3Q96A11 431 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 L3HYPDHQ96EM0 354 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 MMABQ96EY8 250 aaPredicted RBP8.69□□□□□ -1.02
NUP54-207ENST00000508583 CMTM7Q96FZ5 175 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 ZIM3Q96PE6 472 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 TRMOQ9BU70 441 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 NTMT1Q9BV86 223 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 SLC6A16Q9GZN6 736 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 REXO4Q9GZR2 422 aaKnown RBP8.69□□□□□ -1.02
NUP54-207ENST00000508583 RHBGQ9H310 441 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 NOL11Q9H8H0 719 aaKnown RBP8.69□□□□□ -1.02
NUP54-207ENST00000508583 COPS7BQ9H9Q2 264 aaPredicted RBP8.69□□□□□ -1.02
NUP54-207ENST00000508583 TCFL5Q9UL49 500 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 PLLPQ9Y342 182 aa8.69□□□□□ -1.02
NUP54-207ENST00000508583 DSPP15924 2871 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms