RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 CELF3Q5SZQ8 465 aaKnown RBP10.46□□□□□ -0.74
PDLIM5-210ENST00000508216 EIF3MQ7L2H7 374 aaKnown RBP10.46□□□□□ -0.74
PDLIM5-210ENST00000508216 CCDC71Q8IV32 467 aaPredicted RBP10.46□□□□□ -0.74
PDLIM5-210ENST00000508216 FAM71AQ8IYT1 594 aa10.46□□□□□ -0.74
PDLIM5-210ENST00000508216 CMTR2Q8IYT2 770 aaKnown RBP10.46□□□□□ -0.74
PDLIM5-210ENST00000508216 L3MBTL4Q8NA19 623 aa10.46□□□□□ -0.74
PDLIM5-210ENST00000508216 FBXO36Q8NEA4 188 aa10.46□□□□□ -0.74
PDLIM5-210ENST00000508216 GLIS3Q8NEA6 775 aa10.46□□□□□ -0.74
PDLIM5-210ENST00000508216 NLGN4YQ8NFZ3 816 aaPredicted RBP10.46□□□□□ -0.74
PDLIM5-210ENST00000508216 TCTEX1D2Q8WW35 142 aa10.46□□□□□ -0.74
PDLIM5-210ENST00000508216 PABPC5Q96DU9 382 aaKnown RBP10.46□□□□□ -0.74
PDLIM5-210ENST00000508216 ZBED3Q96IU2 234 aaPredicted RBP10.46□□□□□ -0.74
PDLIM5-210ENST00000508216 SLITRK1Q96PX8 696 aa10.46□□□□□ -0.74
PDLIM5-210ENST00000508216 TEFMQ96QE5 360 aaKnown RBP10.46□□□□□ -0.74
PDLIM5-210ENST00000508216 SIGLEC11Q96RL6 698 aa10.46□□□□□ -0.74
PDLIM5-210ENST00000508216 PPP1R16BQ96T49 567 aa10.46□□□□□ -0.74
PDLIM5-210ENST00000508216 NT5C1AQ9BXI3 368 aa10.46□□□□□ -0.74
PDLIM5-210ENST00000508216 MMP28Q9H239 520 aa10.46□□□□□ -0.74
PDLIM5-210ENST00000508216 C14orf105Q9NVL8 296 aa10.46□□□□□ -0.74
PDLIM5-210ENST00000508216 PACSIN3Q9UKS6 424 aa10.46□□□□□ -0.74
PDLIM5-210ENST00000508216 ERVW-1Q9UQF0 538 aa10.46□□□□□ -0.74
PDLIM5-210ENST00000508216 TPRKBQ9Y3C4 175 aa10.46□□□□□ -0.74
PDLIM5-210ENST00000508216 PCDHA2Q9Y5H9 948 aa10.46□□□□□ -0.74
PDLIM5-210ENST00000508216 RBBP6Q7Z6E9 1792 aaKnown RBP10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 A0A1W2PQ09 198 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 OR2A25A4D2G3 310 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 BTBD17A6NE02 478 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 MKRN2OSH3BPM6 223 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 NRP2O60462 931 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 TSPAN3O60637 253 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 MOCS2O96007 188 aaPredicted RBP10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 C1QAP02745 245 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 LTFP02788 710 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 G6PDP11413 515 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 KIR2DL3P43628 341 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 PIK3CGP48736 1102 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 RAB2AP61019 212 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 HTRA4P83105 476 aaPredicted RBP10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 DHODHQ02127 395 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 IRF3Q14653 427 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 OCLNQ16625 522 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 SOWAHCQ53LP3 525 aaPredicted RBP10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 ARHGAP40Q5TG30 622 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 PRAMEF13Q5VWM6 474 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 BICRALQ6AI39 1079 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 LAIR2Q6ISS4 152 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 USP30Q70CQ3 517 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 ZSCAN1Q8NBB4 408 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 BEND2Q8NDZ0 799 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 OR2L8Q8NGY9 312 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 RDH11Q8TC12 318 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 LRRC15Q8TF66 581 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 MAFIPQ8WZ33 124 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 TNFRSF14Q92956 283 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 HDAC10Q969S8 669 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 TMEM143Q96AN5 459 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 MRPS24Q96EL2 167 aaKnown RBP10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 FCRL3Q96P31 734 aaPredicted RBP10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 LGMNQ99538 433 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 APOL2Q9BQE5 337 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 RTP3Q9BQQ7 232 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 DPCDQ9BVM2 203 aaPredicted RBP10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 ADGRE3Q9BY15 652 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 DERL2Q9GZP9 239 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 WDR26Q9H7D7 661 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 SEPSECSQ9HD40 501 aaKnown RBP10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 SERINC1Q9NRX5 453 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 RBFOX1Q9NWB1 397 aaKnown RBP10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 AASSQ9UDR5 926 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 OR12D3Q9UGF7 316 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 ZMYM5Q9UJ78 669 aa10.45□□□□□ -0.74
PDLIM5-210ENST00000508216 C2orf92A0A1B0GVN3 265 aa10.44□□□□□ -0.74
PDLIM5-210ENST00000508216 PI4KAP2A4QPH2 592 aa10.44□□□□□ -0.74
PDLIM5-210ENST00000508216 PRORSD1PA6NEY8 169 aa10.44□□□□□ -0.74
PDLIM5-210ENST00000508216 WASH3PC4AMC7 463 aa10.44□□□□□ -0.74
PDLIM5-210ENST00000508216 D6RAR5 112 aa10.44□□□□□ -0.74
PDLIM5-210ENST00000508216 ATP5J2-PTCD1G3V325 749 aa10.44□□□□□ -0.74
PDLIM5-210ENST00000508216 SLC16A3O15427 465 aaKnown RBP10.44□□□□□ -0.74
PDLIM5-210ENST00000508216 CFLARO15519 480 aa10.44□□□□□ -0.74
PDLIM5-210ENST00000508216 AIREO43918 545 aa10.44□□□□□ -0.74
PDLIM5-210ENST00000508216 DXOO77932 396 aaKnown RBP10.44□□□□□ -0.74
PDLIM5-210ENST00000508216 PGLSO95336 258 aa10.44□□□□□ -0.74
PDLIM5-210ENST00000508216 ZNF888P0CJ79 500 aaPredicted RBP10.44□□□□□ -0.74
PDLIM5-210ENST00000508216 CYP2B6P20813 491 aa10.44□□□□□ -0.74
PDLIM5-210ENST00000508216 UBA1P22314 1058 aaKnown RBP10.44□□□□□ -0.74
PDLIM5-210ENST00000508216 SSTR1P30872 391 aa10.44□□□□□ -0.74
PDLIM5-210ENST00000508216 OMPP47874 163 aa10.44□□□□□ -0.74
PDLIM5-210ENST00000508216 HSPA7P48741 367 aa10.44□□□□□ -0.74
PDLIM5-210ENST00000508216 ISL1P61371 349 aa10.44□□□□□ -0.74
PDLIM5-210ENST00000508216 GK2Q14410 553 aaPredicted RBP10.44□□□□□ -0.74
PDLIM5-210ENST00000508216 RNASE10Q5GAN6 216 aaKnown RBP10.44□□□□□ -0.74
PDLIM5-210ENST00000508216 SPOUT1Q5T280 376 aaKnown RBP10.44□□□□□ -0.74
PDLIM5-210ENST00000508216 COL13A1Q5TAT6 717 aaPredicted RBP10.44□□□□□ -0.74
PDLIM5-210ENST00000508216 FAM46CQ5VWP2 391 aa10.44□□□□□ -0.74
PDLIM5-210ENST00000508216 ZCCHC12Q6PEW1 402 aa10.44□□□□□ -0.74
PDLIM5-210ENST00000508216 ZNF783Q6ZMS7 281 aa10.44□□□□□ -0.74
PDLIM5-210ENST00000508216 ATCAYQ86WG3 371 aa10.44□□□□□ -0.74
PDLIM5-210ENST00000508216 RNF130Q86XS8 419 aa10.44□□□□□ -0.74
PDLIM5-210ENST00000508216 NAXDQ8IW45 347 aa10.44□□□□□ -0.74
PDLIM5-210ENST00000508216 TRIM48Q8IWZ4 208 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms