RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 ZDHHC20Q5W0Z9 365 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 C22orf39Q6P5X5 142 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 KIAA1324Q6UXG2 1013 aaKnown RBP6.88□□□□□ -1.31
CLCN3-206ENST00000507875 TIFABQ6ZNK6 161 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 ADIPOR2Q86V24 386 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 P3H2Q8IVL5 708 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 CNTN4Q8IWV2 1026 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 TAGAPQ8N103 731 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 SPATA22Q8NHS9 363 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 WFDC5Q8TCV5 224 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 DTX3LQ8TDB6 740 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 EFHD2Q96C19 240 aaPredicted RBP6.88□□□□□ -1.31
CLCN3-206ENST00000507875 SLC47A1Q96FL8 570 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 MYADMQ96S97 322 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 TRMT61BQ9BVS5 477 aaKnown RBP6.88□□□□□ -1.31
CLCN3-206ENST00000507875 TRIM4Q9C037 500 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 REXO4Q9GZR2 422 aaKnown RBP6.88□□□□□ -1.31
CLCN3-206ENST00000507875 SLC25A32Q9H2D1 315 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 LINC00597Q9H2U6 94 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 SCPEP1Q9HB40 452 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 MAGEE1Q9HCI5 957 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 KLC4Q9NSK0 619 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 SYBUQ9NX95 663 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 EMC3Q9P0I2 261 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 INTS6Q9UL03 887 aaKnown RBP6.88□□□□□ -1.31
CLCN3-206ENST00000507875 ZDHHC8Q9ULC8 765 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 CLCA2Q9UQC9 943 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 MRPS17Q9Y2R5 130 aaKnown RBP6.88□□□□□ -1.31
CLCN3-206ENST00000507875 GSAPA4D1B5 854 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 WDR91A4D1P6 747 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 CFAP73A6NFT4 308 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 MROH6A6NGR9 719 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 TRIM49D1C9J1S8 452 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 TNFSF14O43557 240 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 SNAP91O60641 907 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 NIPSNAP2O75323 286 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 PMPCBO75439 489 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 PTBP3O95758 552 aaKnown RBP6.88□□□□□ -1.31
CLCN3-206ENST00000507875 SCGB1D1O95968 90 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 MT-CYBP00156 380 aaPredicted RBP6.88□□□□□ -1.31
CLCN3-206ENST00000507875 PLGP00747 810 aaPredicted RBP6.88□□□□□ -1.31
CLCN3-206ENST00000507875 FGF4P08620 206 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 ATXN1LP0C7T5 689 aaKnown RBP6.88□□□□□ -1.31
CLCN3-206ENST00000507875 TPBGLP0DKB5 382 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 PTBP1P26599 531 aaKnown RBP eCLIP6.88□□□□□ -1.31
CLCN3-206ENST00000507875 ARL3P36405 182 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 ARCN1P48444 511 aaKnown RBP6.88□□□□□ -1.31
CLCN3-206ENST00000507875 BCL2L1Q07817 233 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 MSLNQ13421 630 aaPredicted RBP6.88□□□□□ -1.31
CLCN3-206ENST00000507875 KCTD21Q4G0X4 260 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 SIRPB2Q5JXA9 342 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 TSTD2Q5T7W7 516 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 ARMC12Q5T9G4 340 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 SLC25A24Q6NUK1 477 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 CASC4Q6P4E1 433 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 CYB5D1Q6P9G0 228 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 TRMT10BQ6PF06 316 aaKnown RBP6.88□□□□□ -1.31
CLCN3-206ENST00000507875 OTOAQ7RTW8 1153 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 NETO2Q8NC67 525 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 HUS1BQ8NHY5 278 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 FAM216AQ8WUB2 273 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 INPP5DQ92835 1189 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 EDAQ92838 391 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 RSPRY1Q96DX4 576 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 CERS2Q96G23 380 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 WDFY2Q96P53 400 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 LYSMD1Q96S90 227 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 CPNE1Q99829 537 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 KLHL4Q9C0H6 718 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 C12orf65Q9H3J6 166 aaKnown RBP6.88□□□□□ -1.31
CLCN3-206ENST00000507875 NRIP3Q9NQ35 241 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 TAS2R3Q9NYW6 316 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 MUTYHQ9UIF7 546 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 USH1CQ9Y6N9 552 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 C15orf38-AP3S2A0A0A6YYH1 394 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 LOC102723971A0A1B0GUV8 181 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 OR6C65A6NJZ3 312 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 ACOD1A6NK06 481 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 COPEO14579 308 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 PFDN6O15212 129 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 UGT1A9O60656 530 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 PEX11AO75192 247 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 PGLSO95336 258 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 APODP05090 189 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 GLDCP23378 1020 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 VIPR2P41587 438 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 POLR2GP62487 172 aaKnown RBP eCLIP6.87□□□□□ -1.31
CLCN3-206ENST00000507875 KCNJ10P78508 379 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 NFATC3Q12968 1075 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 HTR4Q13639 388 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 MYLK3Q32MK0 819 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 ZNF805Q5CZA5 627 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 MRNIPQ6NTE8 343 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 FAM180AQ6UWF9 173 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 OR9A1PQ8NGU1 263 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 ECHDC3Q96DC8 303 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 ZNF419Q96HQ0 510 aaPredicted RBP6.87□□□□□ -1.31
CLCN3-206ENST00000507875 PPP1R36Q96LQ0 422 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 CAMK1GQ96NX5 476 aa6.87□□□□□ -1.31
CLCN3-206ENST00000507875 LRRC3BQ96PB8 259 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms