RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 BTBD6Q96KE9 485 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 MRGPRX2Q96LB1 330 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 FICDQ9BVA6 458 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 SYNPO2LQ9H987 977 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 LIN28AQ9H9Z2 209 aaKnown RBP6.68□□□□□ -1.34
VCAN-207ENST00000507162 IL1RL2Q9HB29 575 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 ZNF701Q9NV72 531 aaPredicted RBP6.68□□□□□ -1.34
VCAN-207ENST00000507162 HPF1Q9NWY4 346 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 KLHL28Q9NXS3 571 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 GALNT8Q9NY28 637 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 TAB2Q9NYJ8 693 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 LPAR3Q9UBY5 353 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 NFS1Q9Y697 457 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.68□□□□□ -1.34
VCAN-207ENST00000507162 ARHGAP21Q5T5U3 1957 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 CR1P17927 2039 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 TRBV11-1A0A0K0K1C0 115 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 LOC100996750A0A140TA64 210 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 OR2A25A4D2G3 310 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 C5orf60A6NFR6 353 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 AGAP14A8MT82 685 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 DEFB108AA8MXU0 73 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 TXNDC9O14530 226 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 P2RX6O15547 441 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 HCN1O60741 890 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 AP2A2O94973 939 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 AGTP01019 485 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 EPOP01588 193 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 FTH1P02794 183 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 RPN2P04844 631 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 PAX1P15863 534 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 CREB1P16220 341 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 IL1RNP18510 177 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 MC4RP32245 332 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 TRPC1P48995 793 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 DNASE1L1P49184 302 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 SSR4P51571 173 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 MPP1Q00013 466 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 RHAGQ02094 409 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 PLOD1Q02809 727 aaPredicted RBP6.67□□□□□ -1.34
VCAN-207ENST00000507162 SLC25A11Q02978 314 aaKnown RBP6.67□□□□□ -1.34
VCAN-207ENST00000507162 TAP2Q03519 686 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 HSPA14Q0VDF9 509 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 TSTA3Q13630 321 aaPredicted RBP6.67□□□□□ -1.34
VCAN-207ENST00000507162 GRB7Q14451 532 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 PDK1Q15118 436 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 HADHQ16836 314 aaKnown RBP6.67□□□□□ -1.34
VCAN-207ENST00000507162 GPR33Q49SQ1 333 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 KCTD11Q693B1 232 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 FAM47EQ6ZV65 393 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 OTOAQ7RTW8 1153 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 LACC1Q8IV20 430 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 MAP7D3Q8IWC1 876 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 DCUN1D3Q8IWE4 304 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 FBXW8Q8N3Y1 598 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 C3orf56Q8N813 242 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 ZNF441Q8N8Z8 693 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 OR2A1Q8NGT9 310 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 ASB15Q8WXK1 588 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 FAF2Q96CS3 445 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 PEX11GQ96HA9 241 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 TEKT5Q96M29 485 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 WFIKKN1Q96NZ8 548 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 FAM173AQ9BQD7 235 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 WDR83Q9BRX9 315 aaKnown RBP6.67□□□□□ -1.34
VCAN-207ENST00000507162 KRTAP4-6Q9BYQ5 205 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 MRPL47Q9HD33 250 aaKnown RBP6.67□□□□□ -1.34
VCAN-207ENST00000507162 MRPS30Q9NP92 439 aaKnown RBP6.67□□□□□ -1.34
VCAN-207ENST00000507162 ZNF226Q9NYT6 803 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 ZDHHC9Q9Y397 364 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 SCINQ9Y6U3 715 aa6.67□□□□□ -1.34
VCAN-207ENST00000507162 IGLV3-16A0A075B6K0 115 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 C15orf38-AP3S2A0A0A6YYH1 394 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 KRT87PA6NCN2 255 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 MAGEB17A8MXT2 336 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 H0YIG0 161 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 UBFD1O14562 309 aaKnown RBP6.66□□□□□ -1.34
VCAN-207ENST00000507162 B4GALT2O60909 372 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 NSA2O95478 260 aaKnown RBP6.66□□□□□ -1.34
VCAN-207ENST00000507162 NFKB1P19838 968 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 ENDOUP21128 410 aaKnown RBP6.66□□□□□ -1.34
VCAN-207ENST00000507162 CD68P34810 354 aaPredicted RBP6.66□□□□□ -1.34
VCAN-207ENST00000507162 ACVR1BP36896 505 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 BCL6P41182 706 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 MC3RP41968 323 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 FOXO1Q12778 655 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 PDK2Q15119 407 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 DBN1Q16643 649 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 ACSF3Q4G176 576 aaPredicted RBP6.66□□□□□ -1.34
VCAN-207ENST00000507162 MIDNQ504T8 468 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 PPP1R2P3Q6NXS1 205 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 NPNTQ6UXI9 565 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 PID1Q7Z2X4 250 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 ADCK2Q7Z695 626 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 CAND1Q86VP6 1230 aaKnown RBP6.66□□□□□ -1.34
VCAN-207ENST00000507162 SLC26A11Q86WA9 606 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 PLD3Q8IV08 490 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 VRK3Q8IV63 474 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 ELOA2Q8IYF1 753 aaPredicted RBP6.66□□□□□ -1.34
VCAN-207ENST00000507162 RAB42Q8N4Z0 105 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms