RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 TRAV17A0A0B4J275 112 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 TRBC2A0A5B9 178 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 URADA6NGE7 173 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 NDUFS4O43181 175 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 JRKO75564 520 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 RPL21P46778 160 aaKnown RBP11.29□□□□□ -0.6
MED28-203ENST00000503945 AGTR2P50052 363 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 HNMTP50135 292 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 TNFSF10P50591 281 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 RGS1Q08116 209 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 PCOLCEQ15113 449 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 CATSPEREQ5SY80 951 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 C1QL3Q5VWW1 255 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 FAM180AQ6UWF9 173 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 TMEM207Q6UWW9 146 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 PRSS41Q7RTY9 318 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 THOC6Q86W42 341 aaKnown RBP11.29□□□□□ -0.6
MED28-203ENST00000503945 ZC3HC1Q86WB0 502 aaKnown RBP11.29□□□□□ -0.6
MED28-203ENST00000503945 BCORP1Q8N888 145 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 PLPP5Q8NEB5 264 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 ZCCHC10Q8TBK6 192 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 SLC5A11Q8WWX8 675 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 CDKL2Q92772 493 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 NEIL2Q969S2 332 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 MAGEB10Q96LZ2 347 aaPredicted RBP11.29□□□□□ -0.6
MED28-203ENST00000503945 OR4K3Q96R72 315 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 EGFL8Q99944 293 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 AIF1LQ9BQI0 150 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 ERP44Q9BS26 406 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 TXNDC16Q9P2K2 825 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 ZFP69BQ9UJL9 534 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 SLC22A14Q9Y267 594 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 NUP210LQ5VU65 1888 aa11.29□□□□□ -0.6
MED28-203ENST00000503945 SVILO95425 2214 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 IGHV3-20A0A0C4DH32 117 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 FAM95CA0A1B0GW59 222 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 OR2W5A6NFC9 320 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 FAM187AA6NFU0 413 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 E7ESA3 106 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 CDC7O00311 574 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 TP73O15350 636 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 SEC24DO94855 1032 aaPredicted RBP11.28□□□□□ -0.6
MED28-203ENST00000503945 WDPCPO95876 746 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 ITGAMP11215 1152 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 EDN3P14138 238 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 ALOX12P18054 663 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 SOX11P35716 441 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 AHRP35869 848 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 TAS2R39P59534 338 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 POU4F1Q01851 419 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 CBLBQ13191 982 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 RBBP5Q15291 538 aaKnown RBP11.28□□□□□ -0.6
MED28-203ENST00000503945 BTBD16Q32M84 506 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 NXPE4Q6UWF7 544 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 SBSNQ6UWP8 590 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 C3orf62Q6ZUJ4 267 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 CYS1Q717R9 158 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 ABHD13Q7L211 337 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 TICAM1Q8IUC6 712 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 SRRM1Q8IYB3 904 aaKnown RBP11.28□□□□□ -0.6
MED28-203ENST00000503945 ZNF740Q8NDX6 193 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 TRPV3Q8NET8 790 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 MOCOSQ96EN8 888 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 PEX11GQ96HA9 241 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 PDLIM2Q96JY6 352 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 ZNF354BQ96LW1 612 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 OR1F2PQ96R84 312 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 CAPS2Q9BXY5 557 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 CLK4Q9HAZ1 481 aaKnown RBP11.28□□□□□ -0.6
MED28-203ENST00000503945 GPAMQ9HCL2 828 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 WHRNQ9P202 907 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 CTNNAL1Q9UBT7 734 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 PYCARDQ9ULZ3 195 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 PSAT1Q9Y617 370 aa11.28□□□□□ -0.6
MED28-203ENST00000503945 EIF3HO15372 352 aaKnown RBP eCLIP11.27□□□□□ -0.61
MED28-203ENST00000503945 CHST10O43529 356 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 GALR3O60755 368 aaPredicted RBP11.27□□□□□ -0.61
MED28-203ENST00000503945 RDH16O75452 317 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 F10P00742 488 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 CELA2AP08217 269 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 ZNF37AP17032 561 aaPredicted RBP11.27□□□□□ -0.61
MED28-203ENST00000503945 GNAZP19086 355 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 JAK1P23458 1154 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 CASQ1P31415 396 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 SCTRP47872 440 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 SNRPNP63162 240 aaKnown RBP11.27□□□□□ -0.61
MED28-203ENST00000503945 MRPS25P82663 173 aaKnown RBP11.27□□□□□ -0.61
MED28-203ENST00000503945 CDKL1Q00532 357 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 ZNF33BQ06732 778 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 ABRAXAS2Q15018 415 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 EXT1Q16394 746 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 DEFB134Q4QY38 66 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 PLAG1Q6DJT9 500 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 FRA10AC1Q70Z53 315 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 ANKRD37Q7Z713 158 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 PDSS2Q86YH6 399 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 AFAP1L2Q8N4X5 818 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 SPATA4Q8NEY3 305 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 M1APQ8TC57 530 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 NT5CQ8TCD5 201 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms