RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 STUB1Q9UNE7 303 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 HMX2A2RU54 273 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 SH3D21A4FU49 640 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 ARNTLO00327 626 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 KDM4BO94953 1096 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 BMP4P12644 408 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 LCN1P31025 176 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 ABRAXAS2Q15018 415 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 TSC22D1Q15714 1073 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 GDPGP1Q6ZNW5 385 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 TCEANCQ8N8B7 351 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 ADAMTS15Q8TE58 950 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 RPL10LQ96L21 214 aaKnown RBP16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 RNF39Q9H2S5 420 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 CALML5Q9NZT1 146 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 PRKACBP22694 351 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 CPN2P22792 545 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 FAM46CQ5VWP2 391 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 DLK2Q6UY11 383 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 SH2D5Q6ZV89 423 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 KIF18BQ86Y91 864 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 FAM98AQ8NCA5 519 aaKnown RBP16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 PJA1Q8NG27 643 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 TXNRD2Q9NNW7 524 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 MTMR10Q9NXD2 777 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 POU2F3Q9UKI9 436 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 ZNF780BQ9Y6R6 833 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 NHSL1Q5SYE7 1610 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 CHURC1-FNTBB4DL54 471 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 GPR1P46091 355 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 KCNC4Q03721 635 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 EIF4HQ15056 248 aaKnown RBP16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 OR10H4Q8NGA5 316 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 C1orf74Q96LT6 269 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 C3orf30Q96M34 536 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 TSSK6Q9BXA6 273 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 CRTAC1Q9NQ79 661 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 GPR83Q9NYM4 423 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 EXOSC1Q9Y3B2 195 aaKnown RBP16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 OR6A2O95222 327 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 CASP3P42574 277 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 HMBOX1Q6NT76 420 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 LINGO2Q7L985 606 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 RETREG3Q86VR2 466 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 UMODL1-AS1Q8N2C9 162 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 NATD1Q8N6N6 113 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 OR7G1Q8NGA0 311 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 BRI3BPQ8WY22 251 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 ISL2Q96A47 359 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 TMED9Q9BVK6 235 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 RNF121Q9H920 327 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 CD93Q9NPY3 652 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 PRAMEF11O60813 436 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 DGKGP49619 791 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 ARSDP51689 593 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 HSPB3Q12988 150 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 MAD2L1BPQ15013 274 aaPredicted RBP16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 OXA1LQ15070 435 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 LIPKQ5VXJ0 399 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 GON7Q9BXV9 100 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 DCAF13Q9NV06 445 aaKnown RBP16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 SLC22A14Q9Y267 594 aa16.66■□□□□ 0.26
HMGXB3-201ENST00000502717 CLDN8P56748 225 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 DEFA5Q01523 94 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 PRKCDQ05655 676 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 NCEH1Q6PIU2 408 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 SNX33Q8WV41 574 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 DNAJA4Q8WW22 397 aaPredicted RBP16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 ASB15Q8WXK1 588 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 MAELQ96JY0 434 aaKnown RBP16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 IL37Q9NZH6 218 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 FCF1Q9Y324 198 aaKnown RBP16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 TMEM221A6NGB7 291 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 FOXA1P55317 472 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 LARS2Q15031 903 aaKnown RBP16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 KIAA1161Q6NSJ0 714 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 CHPFQ8IZ52 775 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 HS3ST5Q8IZT8 346 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 ACVR1CQ8NER5 493 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 OR52B6Q8NGF0 335 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 PTERQ96BW5 349 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 ZBED6CLQ96FA7 236 aaPredicted RBP16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 ABCG4Q9H172 646 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 ACOT13Q9NPJ3 140 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 ZDHHC3Q9NYG2 299 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 PCDHB14Q9Y5E9 798 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 MAGED1Q9Y5V3 778 aaPredicted RBP16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 IGKV6D-21A0A0A0MT36 114 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 ADH1CP00326 375 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 CKMT1AP12532 417 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 KCNA5P22460 613 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 CRISP3P54108 245 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 FEVQ99581 238 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 MYOCQ99972 504 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 TTPALQ9BTX7 342 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 NUFIP1Q9UHK0 495 aaKnown RBP16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 IGKV6-21A0A0C4DH24 114 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 A0A0G2JPF8 293 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 HNRNPCL3B7ZW38 293 aa16.65■□□□□ 0.26
HMGXB3-201ENST00000502717 APOL3O95236 402 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms