RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 RELAQ04206 551 aa12.94□□□□□ -0.34
CPNE1-227ENST00000498056 TCTE1Q5JU00 501 aa12.94□□□□□ -0.34
CPNE1-227ENST00000498056 WASHC2DQ5SRD0 308 aa12.94□□□□□ -0.34
CPNE1-227ENST00000498056 RGS9BPQ6ZS82 235 aa12.94□□□□□ -0.34
CPNE1-227ENST00000498056 KIRREL3Q8IZU9 778 aa12.94□□□□□ -0.34
CPNE1-227ENST00000498056 CLYBLQ8N0X4 340 aa12.94□□□□□ -0.34
CPNE1-227ENST00000498056 NT5CQ8TCD5 201 aa12.94□□□□□ -0.34
CPNE1-227ENST00000498056 ZNF473Q8WTR7 871 aaKnown RBP12.94□□□□□ -0.34
CPNE1-227ENST00000498056 MS4A8Q9BY19 250 aa12.94□□□□□ -0.34
CPNE1-227ENST00000498056 SPRTNQ9H040 489 aaPredicted RBP12.94□□□□□ -0.34
CPNE1-227ENST00000498056 RHBGQ9H310 441 aa12.94□□□□□ -0.34
CPNE1-227ENST00000498056 PNPOQ9NVS9 261 aa12.94□□□□□ -0.34
CPNE1-227ENST00000498056 FAM53CQ9NYF3 392 aa12.94□□□□□ -0.34
CPNE1-227ENST00000498056 ADGRE2Q9UHX3 823 aa12.94□□□□□ -0.34
CPNE1-227ENST00000498056 SERTAD3Q9UJW9 196 aa12.94□□□□□ -0.34
CPNE1-227ENST00000498056 SLC12A4Q9UP95 1085 aa12.94□□□□□ -0.34
CPNE1-227ENST00000498056 TRAF6Q9Y4K3 522 aa12.94□□□□□ -0.34
CPNE1-227ENST00000498056 CROCCQ5TZA2 2017 aa12.94□□□□□ -0.34
CPNE1-227ENST00000498056 A0A0G2JN53 185 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 A0A1W2PNU3 283 aaPredicted RBP12.93□□□□□ -0.34
CPNE1-227ENST00000498056 SAP18O00422 153 aaKnown RBP12.93□□□□□ -0.34
CPNE1-227ENST00000498056 TXNDC9O14530 226 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 ERI3O43414 337 aaKnown RBP12.93□□□□□ -0.34
CPNE1-227ENST00000498056 SRPX2O60687 465 aaPredicted RBP12.93□□□□□ -0.34
CPNE1-227ENST00000498056 ULK1O75385 1050 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 SCRG1O75711 98 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 TIAF1O95411 115 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 TGFB1P01137 390 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 ZNF888P0CJ79 500 aaPredicted RBP12.93□□□□□ -0.34
CPNE1-227ENST00000498056 HOXD11P31277 338 aaPredicted RBP12.93□□□□□ -0.34
CPNE1-227ENST00000498056 HNRNPH1P31943 449 aaKnown RBP12.93□□□□□ -0.34
CPNE1-227ENST00000498056 PIK3CBP42338 1070 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 STXBP1P61764 594 aaKnown RBP12.93□□□□□ -0.34
CPNE1-227ENST00000498056 GNGT1P63211 74 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 MC2RQ01718 297 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 CSTF3Q12996 717 aaKnown RBP12.93□□□□□ -0.34
CPNE1-227ENST00000498056 PWP1Q13610 501 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 GRM7Q14831 915 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 ABRAXAS2Q15018 415 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 C10orf62Q5T681 223 aaPredicted RBP12.93□□□□□ -0.34
CPNE1-227ENST00000498056 CEACAM20Q6UY09 585 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 CACTIN-AS1Q8N1I8 211 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 METTL27Q8N6F8 245 aaPredicted RBP12.93□□□□□ -0.34
CPNE1-227ENST00000498056 KCT2Q8NC54 265 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 OR8K5Q8NH50 307 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 CREB3L4Q8TEY5 395 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 USP7Q93009 1102 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 C19orf60Q96EN9 201 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 CMTM7Q96FZ5 175 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 SEC16BQ96JE7 1060 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 C10orf90Q96M02 699 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 CENPKQ9BS16 269 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 NDC1Q9BTX1 674 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 ACPTQ9BZG2 426 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 OR51B5Q9H339 312 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 CCDC134Q9H6E4 229 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 COPS7BQ9H9Q2 264 aaPredicted RBP12.93□□□□□ -0.34
CPNE1-227ENST00000498056 TXLNGQ9NUQ3 528 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 FGFR1OP2Q9NVK5 253 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 NDOR1Q9UHB4 597 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 HAO1Q9UJM8 370 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 KLK13Q9UKR3 277 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 SRPK3Q9UPE1 567 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.93□□□□□ -0.34
CPNE1-227ENST00000498056 DNAJC15Q9Y5T4 150 aa12.93□□□□□ -0.34
CPNE1-227ENST00000498056 URADA6NGE7 173 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 C4orf51C9J302 202 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 ZNF749O43361 778 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 EDF1O60869 148 aaKnown RBP12.92□□□□□ -0.34
CPNE1-227ENST00000498056 ETHE1O95571 254 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 JUNP05412 331 aaKnown RBP12.92□□□□□ -0.34
CPNE1-227ENST00000498056 SERPINA6P08185 405 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 LINC00032P0C843 101 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 FGF5P12034 268 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 IL1RNP18510 177 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 SPINK2P20155 84 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 RAB8AP61006 207 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 HMGCS1Q01581 520 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 BTKQ06187 659 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 IL11RAQ14626 422 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 NR6A1Q15406 480 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 NDUFA9Q16795 377 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 PRTGQ2VWP7 1150 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 DCAF12Q5T6F0 453 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 PRAMEF17Q5VTA0 474 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 KHDRBS2Q5VWX1 349 aaKnown RBP12.92□□□□□ -0.34
CPNE1-227ENST00000498056 PWWP2BQ6NUJ5 590 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 TLDC1Q6P9B6 456 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 TRIM40Q6P9F5 258 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 ABHD13Q7L211 337 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 PIWIL2Q8TC59 973 aaKnown RBP12.92□□□□□ -0.34
CPNE1-227ENST00000498056 GAL3ST3Q96A11 431 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 CLIP3Q96DZ5 547 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 THOC1Q96FV9 657 aaKnown RBP12.92□□□□□ -0.34
CPNE1-227ENST00000498056 ZNF285Q96NJ3 590 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 F2RL3Q96RI0 385 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 C17orf62Q9BQA9 187 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 NUF2Q9BZD4 464 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 ULBP3Q9BZM4 244 aa12.92□□□□□ -0.34
CPNE1-227ENST00000498056 SLC6A16Q9GZN6 736 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms