RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 TP53I13Q8NBR0 393 aaPredicted RBP6.66□□□□□ -1.34
USP39-219ENST00000496047 PAPD5Q8NDF8 572 aaKnown RBP6.66□□□□□ -1.34
USP39-219ENST00000496047 ZNF548Q8NEK5 533 aaPredicted RBP6.66□□□□□ -1.34
USP39-219ENST00000496047 GPR156Q8NFN8 814 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 GATA6Q92908 595 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 PPCDCQ96CD2 204 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 SIPA1Q96FS4 1042 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 ZNF597Q96LX8 424 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 CNBD2Q96M20 576 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 RDH12Q96NR8 316 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 OR2M4Q96R27 311 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 FERD3LQ96RJ6 166 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 SEPHS2Q99611 448 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 CIB1Q99828 191 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 CPPED1Q9BRF8 314 aaPredicted RBP6.66□□□□□ -1.34
USP39-219ENST00000496047 SLC17A9Q9BYT1 436 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 ZDHHC5Q9C0B5 715 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 REXO4Q9GZR2 422 aaKnown RBP6.66□□□□□ -1.34
USP39-219ENST00000496047 PAIP1Q9H074 479 aaKnown RBP6.66□□□□□ -1.34
USP39-219ENST00000496047 REEP4Q9H6H4 257 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 NT5DC2Q9H857 520 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 POLMQ9NP87 494 aaPredicted RBP6.66□□□□□ -1.34
USP39-219ENST00000496047 MYNNQ9NPC7 610 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 CD320Q9NPF0 282 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 TRPV5Q9NQA5 729 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 DMRT3Q9NQL9 472 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 AGPAT4Q9NRZ5 378 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 PNPLA3Q9NST1 481 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 OLAHQ9NV23 265 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 VAPAQ9P0L0 249 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 BTNL2Q9UIR0 455 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 CD207Q9UJ71 328 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 DLGAP4Q9Y2H0 992 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 WBP11Q9Y2W2 641 aaKnown RBP6.66□□□□□ -1.34
USP39-219ENST00000496047 TMEM98Q9Y2Y6 226 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 COLEC10Q9Y6Z7 277 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 BPTFQ12830 3046 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 A0A1W2PQU0 124 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 TCRBV5S2A0A599 114 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 TMEM247A6NEH6 219 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 EPOPA6NHQ4 379 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 CLIC1O00299 241 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 RNASET2O00584 256 aaKnown RBP6.65□□□□□ -1.34
USP39-219ENST00000496047 CLOCKO15516 846 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 E2F6O75461 281 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 CREG1O75629 220 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 RASAL1O95294 804 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 KRT75O95678 551 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 HPRP00739 348 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 CST1P01037 141 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 IFNA14P01570 189 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 CAPNS1P04632 268 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 HOXC4P09017 264 aaPredicted RBP6.65□□□□□ -1.34
USP39-219ENST00000496047 ZCCHC18P0CG32 403 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 ERGP11308 486 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 ACP5P13686 325 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 GLULP15104 373 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 NCK1P16333 377 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 CMPK1P30085 196 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 AKT2P31751 481 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 TRIM23P36406 574 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 KIR2DL1P43626 348 aaPredicted RBP6.65□□□□□ -1.34
USP39-219ENST00000496047 CCT8P50990 548 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 ANXA11P50995 505 aaKnown RBP6.65□□□□□ -1.34
USP39-219ENST00000496047 RAB28P51157 221 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 ADPRHP54922 357 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 OR4D2P58180 307 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 ABATP80404 500 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 REEP5Q00765 189 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 TGM3Q08188 693 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 MESP2Q0VG99 397 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 HTR4Q13639 388 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 HEPACAMQ14CZ8 416 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 NRF1Q16656 503 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 AAK1Q2M2I8 961 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 RFX4Q33E94 735 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 CCSMST1Q4G0I0 132 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 ZNF658BQ4V348 819 aaPredicted RBP6.65□□□□□ -1.34
USP39-219ENST00000496047 C2orf27AQ580R0 203 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 GALNT18Q6P9A2 607 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 TRIM40Q6P9F5 258 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 ANGPTL8Q6UXH0 198 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 RNF111Q6ZNA4 994 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 ZNF621Q6ZSS3 439 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 ADCK2Q7Z695 626 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 NUDT13Q86X67 352 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 TICAM1Q8IUC6 712 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 ZDHHC13Q8IUH4 622 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 ZNF547Q8IVP9 402 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 LILRA2Q8N149 483 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 CLEC4FQ8N1N0 589 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 DTWD1Q8N5C7 304 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 LILRA3Q8N6C8 439 aaPredicted RBP6.65□□□□□ -1.34
USP39-219ENST00000496047 MFSD2AQ8NA29 543 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 PLA2G15Q8NCC3 412 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 SRFBP1Q8NEF9 429 aaKnown RBP6.65□□□□□ -1.34
USP39-219ENST00000496047 ZNF555Q8NEP9 628 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 OR4A15Q8NGL6 344 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 OR5AR1Q8NGP9 310 aa6.65□□□□□ -1.34
USP39-219ENST00000496047 FBXO30Q8TB52 745 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms