RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 CCNG2Q16589 344 aa20.15■□□□□ 0.82
PFDN4-205ENST00000493356 CYHR1Q6ZMK1 362 aa20.15■□□□□ 0.82
PFDN4-205ENST00000493356 SLC26A11Q86WA9 606 aa20.15■□□□□ 0.82
PFDN4-205ENST00000493356 RPS19BP1Q86WX3 136 aaKnown RBP20.15■□□□□ 0.82
PFDN4-205ENST00000493356 ZNF227Q86WZ6 799 aa20.15■□□□□ 0.82
PFDN4-205ENST00000493356 TXLNBQ8N3L3 684 aa20.15■□□□□ 0.82
PFDN4-205ENST00000493356 KIF2BQ8N4N8 673 aa20.15■□□□□ 0.82
PFDN4-205ENST00000493356 ELP5Q8TE02 316 aa20.15■□□□□ 0.82
PFDN4-205ENST00000493356 OR1F2PQ96R84 312 aa20.15■□□□□ 0.82
PFDN4-205ENST00000493356 SH2B3Q9UQQ2 575 aa20.15■□□□□ 0.82
PFDN4-205ENST00000493356 INTS1Q8N201 2190 aaKnown RBP20.15■□□□□ 0.82
PFDN4-205ENST00000493356 HCFC1P51610 2035 aa20.14■□□□□ 0.81
PFDN4-205ENST00000493356 FEZF1A0PJY2 475 aa20.14■□□□□ 0.81
PFDN4-205ENST00000493356 ZNF860A6NHJ4 632 aa20.14■□□□□ 0.81
PFDN4-205ENST00000493356 F7P08709 466 aaPredicted RBP20.14■□□□□ 0.81
PFDN4-205ENST00000493356 ENO3P13929 434 aaPredicted RBP20.14■□□□□ 0.81
PFDN4-205ENST00000493356 IL10P22301 178 aa20.14■□□□□ 0.81
PFDN4-205ENST00000493356 TPP2P29144 1249 aaPredicted RBP20.14■□□□□ 0.81
PFDN4-205ENST00000493356 PTGER1P34995 402 aa20.14■□□□□ 0.81
PFDN4-205ENST00000493356 ZNF75DP51815 510 aa20.14■□□□□ 0.81
PFDN4-205ENST00000493356 OR4D2P58180 307 aa20.14■□□□□ 0.81
PFDN4-205ENST00000493356 CDK16Q00536 496 aa20.14■□□□□ 0.81
PFDN4-205ENST00000493356 ZNF470Q6ECI4 717 aa20.14■□□□□ 0.81
PFDN4-205ENST00000493356 UBE2R2Q712K3 238 aaPredicted RBP20.14■□□□□ 0.81
PFDN4-205ENST00000493356 ASPGQ86U10 573 aa20.14■□□□□ 0.81
PFDN4-205ENST00000493356 OR5T3Q8NGG3 340 aa20.14■□□□□ 0.81
PFDN4-205ENST00000493356 KCNJ9Q92806 393 aa20.14■□□□□ 0.81
PFDN4-205ENST00000493356 BAG1Q99933 345 aaPredicted RBP20.14■□□□□ 0.81
PFDN4-205ENST00000493356 TSGA10Q9BZW7 698 aa20.14■□□□□ 0.81
PFDN4-205ENST00000493356 SLC22A7Q9Y694 548 aa20.14■□□□□ 0.81
PFDN4-205ENST00000493356 TCRBV7S3A2A0A539 114 aa20.13■□□□□ 0.81
PFDN4-205ENST00000493356 LCMT2O60294 686 aaKnown RBP20.13■□□□□ 0.81
PFDN4-205ENST00000493356 IGFBP2P18065 325 aa20.13■□□□□ 0.81
PFDN4-205ENST00000493356 PAMP19021 973 aa20.13■□□□□ 0.81
PFDN4-205ENST00000493356 TPSB2P20231 275 aa20.13■□□□□ 0.81
PFDN4-205ENST00000493356 CYB561P49447 251 aa20.13■□□□□ 0.81
PFDN4-205ENST00000493356 TPSAB1Q15661 275 aa20.13■□□□□ 0.81
PFDN4-205ENST00000493356 ZNF549Q6P9A3 640 aa20.13■□□□□ 0.81
PFDN4-205ENST00000493356 DRICH1Q6PGQ1 229 aaPredicted RBP20.13■□□□□ 0.81
PFDN4-205ENST00000493356 PIWIL4Q7Z3Z4 852 aaKnown RBP20.13■□□□□ 0.81
PFDN4-205ENST00000493356 TMEM139Q8IV31 216 aa20.13■□□□□ 0.81
PFDN4-205ENST00000493356 SLC13A3Q8WWT9 602 aa20.13■□□□□ 0.81
PFDN4-205ENST00000493356 PCBD2Q9H0N5 130 aa20.13■□□□□ 0.81
PFDN4-205ENST00000493356 TRIM45Q9H8W5 580 aaPredicted RBP20.13■□□□□ 0.81
PFDN4-205ENST00000493356 DHRS7Q9Y394 339 aa20.13■□□□□ 0.81
PFDN4-205ENST00000493356 NIPBLQ6KC79 2804 aaeCLIP20.12■□□□□ 0.81
PFDN4-205ENST00000493356 MAP1AP78559 2803 aaPredicted RBP20.12■□□□□ 0.81
PFDN4-205ENST00000493356 AVILO75366 819 aa20.12■□□□□ 0.81
PFDN4-205ENST00000493356 SLC35G6P0C7Q6 338 aa20.12■□□□□ 0.81
PFDN4-205ENST00000493356 CD1EP15812 388 aa20.12■□□□□ 0.81
PFDN4-205ENST00000493356 PTGS2P35354 604 aa20.12■□□□□ 0.81
PFDN4-205ENST00000493356 MPP1Q00013 466 aa20.12■□□□□ 0.81
PFDN4-205ENST00000493356 CAPN13Q6MZZ7 669 aaPredicted RBP20.12■□□□□ 0.81
PFDN4-205ENST00000493356 GSTA5Q7RTV2 222 aa20.12■□□□□ 0.81
PFDN4-205ENST00000493356 DENND6AQ8IWF6 608 aa20.12■□□□□ 0.81
PFDN4-205ENST00000493356 CPNE9Q8IYJ1 553 aa20.12■□□□□ 0.81
PFDN4-205ENST00000493356 MARVELD2Q8N4S9 558 aa20.12■□□□□ 0.81
PFDN4-205ENST00000493356 FAM57AQ8TBR7 257 aa20.12■□□□□ 0.81
PFDN4-205ENST00000493356 CD200R1Q8TD46 325 aa20.12■□□□□ 0.81
PFDN4-205ENST00000493356 GPR21Q99679 349 aa20.12■□□□□ 0.81
PFDN4-205ENST00000493356 FAM129AQ9BZQ8 928 aa20.12■□□□□ 0.81
PFDN4-205ENST00000493356 CCDC68Q9H2F9 335 aa20.12■□□□□ 0.81
PFDN4-205ENST00000493356 FBXO6Q9NRD1 293 aaPredicted RBP20.12■□□□□ 0.81
PFDN4-205ENST00000493356 NAV3Q8IVL0 2385 aa20.11■□□□□ 0.81
PFDN4-205ENST00000493356 CTAGE9A4FU28 777 aa20.11■□□□□ 0.81
PFDN4-205ENST00000493356 FHP07954 510 aa20.11■□□□□ 0.81
PFDN4-205ENST00000493356 ITGA8P53708 1063 aa20.11■□□□□ 0.81
PFDN4-205ENST00000493356 CTBP1Q13363 440 aa20.11■□□□□ 0.81
PFDN4-205ENST00000493356 KCTD19Q17RG1 926 aaPredicted RBP20.11■□□□□ 0.81
PFDN4-205ENST00000493356 ARMC3Q5W041 872 aa20.11■□□□□ 0.81
PFDN4-205ENST00000493356 CD163Q86VB7 1156 aa20.11■□□□□ 0.81
PFDN4-205ENST00000493356 C17orf64Q86WR6 236 aa20.11■□□□□ 0.81
PFDN4-205ENST00000493356 AFAP1L2Q8N4X5 818 aa20.11■□□□□ 0.81
PFDN4-205ENST00000493356 RNF10Q8N5U6 811 aaKnown RBP20.11■□□□□ 0.81
PFDN4-205ENST00000493356 POGLUT1Q8NBL1 392 aa20.11■□□□□ 0.81
PFDN4-205ENST00000493356 TMEM125Q96AQ2 219 aa20.11■□□□□ 0.81
PFDN4-205ENST00000493356 TBC1D20Q96BZ9 403 aa20.11■□□□□ 0.81
PFDN4-205ENST00000493356 POM121Q96HA1 1249 aa20.11■□□□□ 0.81
PFDN4-205ENST00000493356 NPDC1Q9NQX5 325 aaPredicted RBP20.11■□□□□ 0.81
PFDN4-205ENST00000493356 HRH3Q9Y5N1 445 aa20.11■□□□□ 0.81
PFDN4-205ENST00000493356 A0A1B0GTH9 108 aa20.1■□□□□ 0.81
PFDN4-205ENST00000493356 TFECO14948 347 aaPredicted RBP20.1■□□□□ 0.81
PFDN4-205ENST00000493356 DIAPH2O60879 1101 aa20.1■□□□□ 0.81
PFDN4-205ENST00000493356 DNAJB6O75190 326 aa20.1■□□□□ 0.81
PFDN4-205ENST00000493356 TPOP07202 933 aa20.1■□□□□ 0.81
PFDN4-205ENST00000493356 TRHRP34981 398 aaPredicted RBP20.1■□□□□ 0.81
PFDN4-205ENST00000493356 KCNJ1P48048 391 aa20.1■□□□□ 0.81
PFDN4-205ENST00000493356 MLF1P58340 268 aa20.1■□□□□ 0.81
PFDN4-205ENST00000493356 DHX34Q14147 1143 aaKnown RBP20.1■□□□□ 0.81
PFDN4-205ENST00000493356 HERC3Q15034 1050 aa20.1■□□□□ 0.81
PFDN4-205ENST00000493356 CASC4Q6P4E1 433 aa20.1■□□□□ 0.81
PFDN4-205ENST00000493356 CEP128Q6ZU80 1094 aa20.1■□□□□ 0.81
PFDN4-205ENST00000493356 MFSD9Q8NBP5 474 aa20.1■□□□□ 0.81
PFDN4-205ENST00000493356 GALR3O60755 368 aaPredicted RBP20.09■□□□□ 0.81
PFDN4-205ENST00000493356 CDH1P12830 882 aa20.09■□□□□ 0.81
PFDN4-205ENST00000493356 JAK1P23458 1154 aa20.09■□□□□ 0.81
PFDN4-205ENST00000493356 GRK3P35626 688 aa20.09■□□□□ 0.81
PFDN4-205ENST00000493356 MEOX1P50221 254 aa20.09■□□□□ 0.81
PFDN4-205ENST00000493356 HLCSP50747 726 aa20.09■□□□□ 0.81
PFDN4-205ENST00000493356 TERF1P54274 439 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms