RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 TTI1O43156 1089 aa11.74□□□□□ -0.53
COL6A1-205ENST00000492851 GALR3O60755 368 aaPredicted RBP11.74□□□□□ -0.53
COL6A1-205ENST00000492851 H2AFYO75367 372 aaKnown RBP11.74□□□□□ -0.53
COL6A1-205ENST00000492851 GUCA1CO95843 209 aa11.74□□□□□ -0.53
COL6A1-205ENST00000492851 CD46P15529 392 aa11.74□□□□□ -0.53
COL6A1-205ENST00000492851 HPDP32754 393 aaPredicted RBP11.74□□□□□ -0.53
COL6A1-205ENST00000492851 DCTP40126 519 aa11.74□□□□□ -0.53
COL6A1-205ENST00000492851 CASP6P55212 293 aa11.74□□□□□ -0.53
COL6A1-205ENST00000492851 CDKL1Q00532 357 aa11.74□□□□□ -0.53
COL6A1-205ENST00000492851 MGAT5Q09328 741 aa11.74□□□□□ -0.53
COL6A1-205ENST00000492851 ABRAXAS2Q15018 415 aa11.74□□□□□ -0.53
COL6A1-205ENST00000492851 KRTCAP3Q53RY4 240 aa11.74□□□□□ -0.53
COL6A1-205ENST00000492851 ZNF766Q5HY98 468 aa11.74□□□□□ -0.53
COL6A1-205ENST00000492851 STEAP4Q687X5 459 aa11.74□□□□□ -0.53
COL6A1-205ENST00000492851 HIST2H2BCQ6DN03 193 aa11.74□□□□□ -0.53
COL6A1-205ENST00000492851 MBOAT1Q6ZNC8 495 aa11.74□□□□□ -0.53
COL6A1-205ENST00000492851 PRSS41Q7RTY9 318 aa11.74□□□□□ -0.53
COL6A1-205ENST00000492851 IGDCC3Q8IVU1 814 aa11.74□□□□□ -0.53
COL6A1-205ENST00000492851 FAM98AQ8NCA5 519 aaKnown RBP11.74□□□□□ -0.53
COL6A1-205ENST00000492851 ZCCHC10Q8TBK6 192 aa11.74□□□□□ -0.53
COL6A1-205ENST00000492851 ANP32BQ92688 251 aaKnown RBP11.74□□□□□ -0.53
COL6A1-205ENST00000492851 PYCR2Q96C36 320 aa11.74□□□□□ -0.53
COL6A1-205ENST00000492851 CFAP36Q96G28 342 aa11.74□□□□□ -0.53
COL6A1-205ENST00000492851 PEX11GQ96HA9 241 aa11.74□□□□□ -0.53
COL6A1-205ENST00000492851 TAAR6Q96RI8 345 aa11.74□□□□□ -0.53
COL6A1-205ENST00000492851 MACROD1Q9BQ69 325 aa11.74□□□□□ -0.53
COL6A1-205ENST00000492851 AIF1LQ9BQI0 150 aa11.74□□□□□ -0.53
COL6A1-205ENST00000492851 CAPS2Q9BXY5 557 aa11.74□□□□□ -0.53
COL6A1-205ENST00000492851 PELI2Q9HAT8 420 aa11.74□□□□□ -0.53
COL6A1-205ENST00000492851 TRMT1Q9NXH9 659 aaKnown RBP11.74□□□□□ -0.53
COL6A1-205ENST00000492851 IGHV3-20A0A0C4DH32 117 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 SYNDIG1LA6NDD5 238 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 RDH16O75452 317 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 STATHP02808 62 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 SERPIND1P05546 499 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 FHP07954 510 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 CELA2AP08217 269 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 GNAZP19086 355 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 GSTM2P28161 218 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 SCTRP47872 440 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 TDGF1P3P51864 188 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 OR4D2P58180 307 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 RHAGQ02094 409 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 CBLBQ13191 982 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 SFT2D3Q587I9 215 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 PAPD4Q6PIY7 484 aaKnown RBP11.73□□□□□ -0.53
COL6A1-205ENST00000492851 LANCL3Q6ZV70 420 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 THOC6Q86W42 341 aaKnown RBP11.73□□□□□ -0.53
COL6A1-205ENST00000492851 PDSS2Q86YH6 399 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 KLHL7Q8IXQ5 586 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 TMEM178AQ8NBL3 297 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 ZNF740Q8NDX6 193 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 ARMC2Q8NEN0 867 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 TTLQ8NG68 377 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 NEIL2Q969S2 332 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 SEC16BQ96JE7 1060 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 OR4K3Q96R72 315 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 GRPEL1Q9HAV7 217 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 POPDC3Q9HBV1 291 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 CHMP2BQ9UQN3 213 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 SH2B3Q9UQQ2 575 aa11.73□□□□□ -0.53
COL6A1-205ENST00000492851 UNC79Q9P2D8 2635 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 PSMD12O00232 456 aaPredicted RBP11.72□□□□□ -0.53
COL6A1-205ENST00000492851 HNRNPRO43390 633 aaKnown RBP11.72□□□□□ -0.53
COL6A1-205ENST00000492851 CHST10O43529 356 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 PRMT3O60678 531 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 BANF1O75531 89 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 UNC5CO95185 931 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 F10P00742 488 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 SERPINA6P08185 405 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 ZNF37AP17032 561 aaPredicted RBP11.72□□□□□ -0.53
COL6A1-205ENST00000492851 EEF1DP29692 281 aaKnown RBP11.72□□□□□ -0.53
COL6A1-205ENST00000492851 EFNA3P52797 238 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 ITGA8P53708 1063 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 SLC12A2P55011 1212 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 STXBP1P61764 594 aaKnown RBP11.72□□□□□ -0.53
COL6A1-205ENST00000492851 GNG11P61952 73 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 ART3Q13508 389 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 USP10Q14694 798 aaKnown RBP11.72□□□□□ -0.53
COL6A1-205ENST00000492851 DEFB134Q4QY38 66 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 HP1BP3Q5SSJ5 553 aaPredicted RBP11.72□□□□□ -0.53
COL6A1-205ENST00000492851 CATSPEREQ5SY80 951 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 ZNF787Q6DD87 383 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 TRMT10BQ6PF06 316 aaKnown RBP11.72□□□□□ -0.53
COL6A1-205ENST00000492851 NXPE4Q6UWF7 544 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 SBSNQ6UWP8 590 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 QSOX2Q6ZRP7 698 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 ADAMTSL2Q86TH1 951 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 FJX1Q86VR8 437 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 CREG2Q8IUH2 290 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 BEST3Q8N1M1 668 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 TCAIMQ8N3R3 496 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 THAP3Q8WTV1 239 aaPredicted RBP11.72□□□□□ -0.53
COL6A1-205ENST00000492851 CDKL2Q92772 493 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 CAPZA3Q96KX2 299 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 OLFM1Q99784 485 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 EGFL8Q99944 293 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 PITHD1Q9GZP4 211 aaPredicted RBP11.72□□□□□ -0.53
COL6A1-205ENST00000492851 LANCL2Q9NS86 450 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 MOCS1Q9NZB8 636 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms