RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 NSDHLQ15738 373 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 SYT16Q17RD7 645 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 BBS9Q3SYG4 887 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 KRTCAP3Q53RY4 240 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 TEDDM1Q5T9Z0 273 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 HECTD2Q5U5R9 776 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 ZNF324BQ6AW86 544 aaPredicted RBP8.26□□□□□ -1.09
NUP50-217ENST00000491860 ANKRD37Q7Z713 158 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 SLC26A11Q86WA9 606 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 PLD3Q8IV08 490 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 TMEM151BQ8IW70 566 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 EID3Q8N140 333 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 AGGF1Q8N302 714 aaeCLIP8.26□□□□□ -1.09
NUP50-217ENST00000491860 AFAP1L2Q8N4X5 818 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 TMEM178AQ8NBL3 297 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 BBOF1Q8ND07 529 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 CATSPER1Q8NEC5 780 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 C7orf57Q8NEG2 295 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 ARMC2Q8NEN0 867 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 TTLQ8NG68 377 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 NT5CQ8TCD5 201 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 SLC5A11Q8WWX8 675 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 ANP32BQ92688 251 aaKnown RBP8.26□□□□□ -1.09
NUP50-217ENST00000491860 TBC1D20Q96BZ9 403 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 SNF8Q96H20 258 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 PHF12Q96QT6 1004 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 NDNQ99608 321 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 AIF1LQ9BQI0 150 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 UTP23Q9BRU9 249 aaKnown RBP8.26□□□□□ -1.09
NUP50-217ENST00000491860 PITHD1Q9GZP4 211 aaPredicted RBP8.26□□□□□ -1.09
NUP50-217ENST00000491860 DDX47Q9H0S4 455 aaKnown RBP8.26□□□□□ -1.09
NUP50-217ENST00000491860 ATG10Q9H0Y0 220 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 KCNK13Q9HB14 408 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 POPDC3Q9HBV1 291 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 HCN3Q9P1Z3 774 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 ZFP69BQ9UJL9 534 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 ADAMTS6Q9UKP5 1117 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 NAALAD2Q9Y3Q0 740 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 KCNE2Q9Y6J6 123 aa8.26□□□□□ -1.09
NUP50-217ENST00000491860 APCP25054 2843 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 SCN3AQ9NY46 2000 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 C2CD3Q4AC94 2353 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 FEZF1A0PJY2 475 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 A8MUI8 341 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 SGK494L7N484 410 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 PSMD12O00232 456 aaPredicted RBP8.25□□□□□ -1.09
NUP50-217ENST00000491860 TTI1O43156 1089 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 HNRNPRO43390 633 aaKnown RBP8.25□□□□□ -1.09
NUP50-217ENST00000491860 OR1F1O43749 312 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 GALR3O60755 368 aaPredicted RBP8.25□□□□□ -1.09
NUP50-217ENST00000491860 H2AFYO75367 372 aaKnown RBP8.25□□□□□ -1.09
NUP50-217ENST00000491860 SEC24DO94855 1032 aaPredicted RBP8.25□□□□□ -1.09
NUP50-217ENST00000491860 TSPAN12O95859 305 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 CD46P15529 392 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 GABRB3P28472 473 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 TDGF1P3P51864 188 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 SLC12A2P55011 1212 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 CDKN2DP55273 166 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 TIAL1Q01085 375 aaKnown RBP eCLIP8.25□□□□□ -1.09
NUP50-217ENST00000491860 DR1Q01658 176 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 ART3Q13508 389 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 NAA30Q147X3 362 aaPredicted RBP8.25□□□□□ -1.09
NUP50-217ENST00000491860 ABRAXAS2Q15018 415 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 ZNF766Q5HY98 468 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 ACER2Q5QJU3 275 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 RBM20Q5T481 1227 aaKnown RBP8.25□□□□□ -1.09
NUP50-217ENST00000491860 STEAP4Q687X5 459 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 PAPD4Q6PIY7 484 aaKnown RBP8.25□□□□□ -1.09
NUP50-217ENST00000491860 TMEM207Q6UWW9 146 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 GFRALQ6UXV0 394 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 RPTNQ6XPR3 784 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 QSOX2Q6ZRP7 698 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 ADAMTSL2Q86TH1 951 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 TCAIMQ8N3R3 496 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 ZCCHC10Q8TBK6 192 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 ADAMTS18Q8TE60 1221 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 ALKBH8Q96BT7 664 aaKnown RBP8.25□□□□□ -1.09
NUP50-217ENST00000491860 SYNPO2LQ9H987 977 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 PLA2G3Q9NZ20 509 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 COPG2Q9UBF2 871 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 SEC14L3Q9UDX4 400 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 ENTPD4Q9Y227 616 aa8.25□□□□□ -1.09
NUP50-217ENST00000491860 KLF2Q9Y5W3 355 aaPredicted RBP8.25□□□□□ -1.09
NUP50-217ENST00000491860 MYO7BQ6PIF6 2116 aa8.24□□□□□ -1.09
NUP50-217ENST00000491860 FCHO1O14526 889 aa8.24□□□□□ -1.09
NUP50-217ENST00000491860 FFAR3O14843 346 aa8.24□□□□□ -1.09
NUP50-217ENST00000491860 GPR42O15529 346 aa8.24□□□□□ -1.09
NUP50-217ENST00000491860 LCMT2O60294 686 aaKnown RBP8.24□□□□□ -1.09
NUP50-217ENST00000491860 RDH16O75452 317 aa8.24□□□□□ -1.09
NUP50-217ENST00000491860 SERPIND1P05546 499 aa8.24□□□□□ -1.09
NUP50-217ENST00000491860 SERPINA6P08185 405 aa8.24□□□□□ -1.09
NUP50-217ENST00000491860 ZNF37AP17032 561 aaPredicted RBP8.24□□□□□ -1.09
NUP50-217ENST00000491860 GNAZP19086 355 aa8.24□□□□□ -1.09
NUP50-217ENST00000491860 AGAP20933 346 aa8.24□□□□□ -1.09
NUP50-217ENST00000491860 EEF1DP29692 281 aaKnown RBP8.24□□□□□ -1.09
NUP50-217ENST00000491860 ELK3P41970 407 aa8.24□□□□□ -1.09
NUP50-217ENST00000491860 SCTRP47872 440 aa8.24□□□□□ -1.09
NUP50-217ENST00000491860 OR4D2P58180 307 aa8.24□□□□□ -1.09
NUP50-217ENST00000491860 STXBP1P61764 594 aaKnown RBP8.24□□□□□ -1.09
NUP50-217ENST00000491860 RHAGQ02094 409 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms