RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 EEF1DP29692 281 aaKnown RBP7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 MAGEA3P43357 314 aa7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 XCR1P46094 333 aa7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 RHAGQ02094 409 aa7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 ALDH6A1Q02252 535 aaKnown RBP7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 DHX34Q14147 1143 aaKnown RBP7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 TTLL9Q3SXZ7 439 aa7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 RBM20Q5T481 1227 aaKnown RBP7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 ZNF470Q6ECI4 717 aa7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 SLC25A25Q6KCM7 469 aa7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 NEPROQ6NW34 567 aa7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 PRSS41Q7RTY9 318 aa7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 PIWIL4Q7Z3Z4 852 aaKnown RBP7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 PLD3Q8IV08 490 aa7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 LMNTD2Q8IXW0 634 aa7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 EID3Q8N140 333 aa7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 GHDCQ8N2G8 530 aa7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 AFAP1L2Q8N4X5 818 aa7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 SLC5A8Q8N695 610 aa7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 CAMKVQ8NCB2 501 aa7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 ELP5Q8TE02 316 aa7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 CAPZA3Q96KX2 299 aa7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 SIGLEC10Q96LC7 697 aa7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 PRAP1Q96NZ9 151 aa7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 NDNQ99608 321 aa7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 PCBD2Q9H0N5 130 aa7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 KCNK13Q9HB14 408 aa7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 MCCC2Q9HCC0 563 aa7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 LANCL2Q9NS86 450 aa7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 DHRS7Q9Y394 339 aa7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 ASB1Q9Y576 335 aa7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 COMMD10Q9Y6G5 202 aa7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 DNAJC13O75165 2243 aa7.95□□□□□ -1.14
APOBEC3F-204ENST00000491387 FREM3P0C091 2139 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 FAM237BA0A1B0GVD1 139 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 MAGEB16A2A368 324 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 GABRR3A8MPY1 467 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 E5RI56 91 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 NPIPA5E9PKD4 350 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 PGRMC1O00264 195 aaKnown RBP7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 ZBTB14O43829 449 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 NRDCO43847 1150 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 NME2P1O60361 137 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 KRT38O76015 456 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 HAUS5O94927 633 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 SNRPB2P08579 225 aaKnown RBP7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 MLNP12872 115 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 PAMP19021 973 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 NME2P22392 152 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 GABRB3P28472 473 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 TRHRP34981 398 aaPredicted RBP7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 KRTAP10-9P60411 292 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 CSNK1G2P78368 415 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 MEF2AQ02078 507 aaPredicted RBP7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 SRSF11Q05519 484 aaKnown RBP7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 DHX9Q08211 1270 aaKnown RBP7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 TSTA3Q13630 321 aaPredicted RBP7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 USP10Q14694 798 aaKnown RBP7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 MINDY4Q4G0A6 757 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 SFT2D3Q587I9 215 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 RNASEH2BQ5TBB1 312 aaKnown RBP7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 FCRLBQ6BAA4 426 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 SPINK14Q6IE38 97 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 LRRC8EQ6NSJ5 796 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 NIPAL1Q6NVV3 410 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 PAPD4Q6PIY7 484 aaKnown RBP7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 PDSS2Q86YH6 399 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 DOLPP1Q86YN1 238 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 CPNE9Q8IYJ1 553 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 C17orf53Q8N3J3 647 aaPredicted RBP7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 FAM98AQ8NCA5 519 aaKnown RBP7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 ABHD11Q8NFV4 315 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 MAIP1Q8WWC4 291 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 LPAR4Q99677 370 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 GPR21Q99679 349 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 HES7Q9BYE0 225 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 CLK4Q9HAZ1 481 aaKnown RBP7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 ANKHQ9HCJ1 492 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 CCDC177Q9NQR7 707 aaPredicted RBP7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 IARS2Q9NSE4 1012 aaKnown RBP7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 SH3BGRL2Q9UJC5 107 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 ADAMTS6Q9UKP5 1117 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 IKZF3Q9UKT9 509 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 SNX12Q9UMY4 172 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 NPIPA1Q9UND3 350 aa7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 NIPBLQ6KC79 2804 aaeCLIP7.94□□□□□ -1.14
APOBEC3F-204ENST00000491387 MAP1AP78559 2803 aaPredicted RBP7.93□□□□□ -1.14
APOBEC3F-204ENST00000491387 ZNF407Q9C0G0 2248 aa7.93□□□□□ -1.14
APOBEC3F-204ENST00000491387 ABCA4P78363 2273 aa7.93□□□□□ -1.14
APOBEC3F-204ENST00000491387 OR2W5A6NFC9 320 aa7.93□□□□□ -1.14
APOBEC3F-204ENST00000491387 SGK494L7N484 410 aa7.93□□□□□ -1.14
APOBEC3F-204ENST00000491387 DNALI1O14645 258 aaPredicted RBP7.93□□□□□ -1.14
APOBEC3F-204ENST00000491387 TP73O15350 636 aa7.93□□□□□ -1.14
APOBEC3F-204ENST00000491387 SLC16A5O15375 505 aa7.93□□□□□ -1.14
APOBEC3F-204ENST00000491387 MAN1A2O60476 641 aa7.93□□□□□ -1.14
APOBEC3F-204ENST00000491387 PIAS1O75925 651 aa7.93□□□□□ -1.14
APOBEC3F-204ENST00000491387 TSPAN12O95859 305 aa7.93□□□□□ -1.14
APOBEC3F-204ENST00000491387 IL1RNP18510 177 aa7.93□□□□□ -1.14
APOBEC3F-204ENST00000491387 CCND1P24385 295 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms