RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 ZDHHC24Q6UX98 284 aa29.64■■■□□ 2.34
LDB1-204ENST00000490751 PSMF1Q92530 271 aa29.64■■■□□ 2.34
LDB1-204ENST00000490751 LMF1Q96S06 567 aa29.64■■■□□ 2.34
LDB1-204ENST00000490751 GPR22Q99680 433 aa29.64■■■□□ 2.34
LDB1-204ENST00000490751 DERL2Q9GZP9 239 aa29.64■■■□□ 2.34
LDB1-204ENST00000490751 PTGFRNQ9P2B2 879 aa29.64■■■□□ 2.34
LDB1-204ENST00000490751 ZFP69BQ9UJL9 534 aa29.64■■■□□ 2.34
LDB1-204ENST00000490751 KCNE2Q9Y6J6 123 aa29.64■■■□□ 2.34
LDB1-204ENST00000490751 ESPL1Q14674 2120 aa29.63■■■□□ 2.33
LDB1-204ENST00000490751 PRRC2CQ9Y520 2896 aaKnown RBP29.63■■■□□ 2.33
LDB1-204ENST00000490751 LRRK2Q5S007 2527 aa29.63■■■□□ 2.33
LDB1-204ENST00000490751 PHGDHO43175 533 aaKnown RBP29.63■■■□□ 2.33
LDB1-204ENST00000490751 CYC1P08574 325 aa29.63■■■□□ 2.33
LDB1-204ENST00000490751 RGS1Q08116 209 aa29.63■■■□□ 2.33
LDB1-204ENST00000490751 MRPL49Q13405 166 aaKnown RBP29.63■■■□□ 2.33
LDB1-204ENST00000490751 NXPE4Q6UWF7 544 aa29.63■■■□□ 2.33
LDB1-204ENST00000490751 LANCL3Q6ZV70 420 aa29.63■■■□□ 2.33
LDB1-204ENST00000490751 CTAGE3PQ8IX95 158 aa29.63■■■□□ 2.33
LDB1-204ENST00000490751 SPATA6LQ8N4H0 392 aa29.63■■■□□ 2.33
LDB1-204ENST00000490751 AFAP1L2Q8N4X5 818 aa29.63■■■□□ 2.33
LDB1-204ENST00000490751 SIRT6Q8N6T7 355 aa29.63■■■□□ 2.33
LDB1-204ENST00000490751 NT5CQ8TCD5 201 aa29.63■■■□□ 2.33
LDB1-204ENST00000490751 CYTH2Q99418 400 aa29.63■■■□□ 2.33
LDB1-204ENST00000490751 AIF1LQ9BQI0 150 aa29.63■■■□□ 2.33
LDB1-204ENST00000490751 COPG1Q9Y678 874 aaKnown RBP29.63■■■□□ 2.33
LDB1-204ENST00000490751 CNTRLQ7Z7A1 2325 aa29.62■■■□□ 2.33
LDB1-204ENST00000490751 SOX11P35716 441 aa29.62■■■□□ 2.33
LDB1-204ENST00000490751 AHRP35869 848 aa29.62■■■□□ 2.33
LDB1-204ENST00000490751 C18orf21Q32NC0 220 aaPredicted RBP29.62■■■□□ 2.33
LDB1-204ENST00000490751 RIPOR1Q6ZS17 1223 aa29.62■■■□□ 2.33
LDB1-204ENST00000490751 RHBDF1Q96CC6 855 aa29.62■■■□□ 2.33
LDB1-204ENST00000490751 TUBB6Q9BUF5 446 aa29.62■■■□□ 2.33
LDB1-204ENST00000490751 RBCK1Q9BYM8 510 aa29.62■■■□□ 2.33
LDB1-204ENST00000490751 C19orf25Q9UFG5 118 aaPredicted RBP29.62■■■□□ 2.33
LDB1-204ENST00000490751 NTNG1Q9Y2I2 539 aa29.62■■■□□ 2.33
LDB1-204ENST00000490751 OR2W5A6NFC9 320 aa29.61■■■□□ 2.33
LDB1-204ENST00000490751 NCF1BA6NI72 391 aaPredicted RBP29.61■■■□□ 2.33
LDB1-204ENST00000490751 NCF1CA8MVU1 366 aaPredicted RBP29.61■■■□□ 2.33
LDB1-204ENST00000490751 WDR47O94967 919 aa29.61■■■□□ 2.33
LDB1-204ENST00000490751 UQCRHP07919 91 aa29.61■■■□□ 2.33
LDB1-204ENST00000490751 CCDC166P0CW27 439 aa29.61■■■□□ 2.33
LDB1-204ENST00000490751 NCF1P14598 390 aaPredicted RBP29.61■■■□□ 2.33
LDB1-204ENST00000490751 ALOX12P18054 663 aa29.61■■■□□ 2.33
LDB1-204ENST00000490751 MAGEA4P43358 317 aa29.61■■■□□ 2.33
LDB1-204ENST00000490751 CKAP4Q07065 602 aaKnown RBP29.61■■■□□ 2.33
LDB1-204ENST00000490751 ZNF169Q14929 603 aaPredicted RBP29.61■■■□□ 2.33
LDB1-204ENST00000490751 TGFBIQ15582 683 aa29.61■■■□□ 2.33
LDB1-204ENST00000490751 FHL5Q5TD97 284 aa29.61■■■□□ 2.33
LDB1-204ENST00000490751 AMER2Q8N7J2 671 aa29.61■■■□□ 2.33
LDB1-204ENST00000490751 ANKRD53Q8N9V6 530 aa29.61■■■□□ 2.33
LDB1-204ENST00000490751 OR5T3Q8NGG3 340 aa29.61■■■□□ 2.33
LDB1-204ENST00000490751 PEX11GQ96HA9 241 aa29.61■■■□□ 2.33
LDB1-204ENST00000490751 IMMP1LQ96LU5 166 aa29.61■■■□□ 2.33
LDB1-204ENST00000490751 CPAMD8Q8IZJ3 1885 aa29.61■■■□□ 2.33
LDB1-204ENST00000490751 IGHV3-20A0A0C4DH32 117 aa29.6■■■□□ 2.33
LDB1-204ENST00000490751 CTAGE15A4D2H0 777 aa29.6■■■□□ 2.33
LDB1-204ENST00000490751 GALR3O60755 368 aaPredicted RBP29.6■■■□□ 2.33
LDB1-204ENST00000490751 WFS1O76024 890 aa29.6■■■□□ 2.33
LDB1-204ENST00000490751 B3GALT4O96024 378 aa29.6■■■□□ 2.33
LDB1-204ENST00000490751 ZNF888P0CJ79 500 aaPredicted RBP29.6■■■□□ 2.33
LDB1-204ENST00000490751 ITGAMP11215 1152 aa29.6■■■□□ 2.33
LDB1-204ENST00000490751 STMN1P16949 149 aa29.6■■■□□ 2.33
LDB1-204ENST00000490751 GDF5P43026 501 aa29.6■■■□□ 2.33
LDB1-204ENST00000490751 SLC6A12P48065 614 aa29.6■■■□□ 2.33
LDB1-204ENST00000490751 RBBP5Q15291 538 aaKnown RBP29.6■■■□□ 2.33
LDB1-204ENST00000490751 TLR1Q15399 786 aa29.6■■■□□ 2.33
LDB1-204ENST00000490751 NR6A1Q15406 480 aa29.6■■■□□ 2.33
LDB1-204ENST00000490751 KBTBD12Q3ZCT8 623 aa29.6■■■□□ 2.33
LDB1-204ENST00000490751 DEFB134Q4QY38 66 aa29.6■■■□□ 2.33
LDB1-204ENST00000490751 CPEB2Q7Z5Q1 589 aaKnown RBP29.6■■■□□ 2.33
LDB1-204ENST00000490751 CTAGE6Q86UF2 777 aa29.6■■■□□ 2.33
LDB1-204ENST00000490751 KLHDC8AQ8IYD2 350 aa29.6■■■□□ 2.33
LDB1-204ENST00000490751 SEC24DO94855 1032 aaPredicted RBP29.59■■■□□ 2.33
LDB1-204ENST00000490751 ICAM2P13598 275 aa29.59■■■□□ 2.33
LDB1-204ENST00000490751 TSFMP43897 325 aaKnown RBP29.59■■■□□ 2.33
LDB1-204ENST00000490751 AP2B1P63010 937 aa29.59■■■□□ 2.33
LDB1-204ENST00000490751 SKP1P63208 163 aa29.59■■■□□ 2.33
LDB1-204ENST00000490751 ZKSCAN8Q15776 578 aaPredicted RBP29.59■■■□□ 2.33
LDB1-204ENST00000490751 EIF2S3LQ2VIR3 472 aaKnown RBP29.59■■■□□ 2.33
LDB1-204ENST00000490751 PPM1NQ8N819 430 aa29.59■■■□□ 2.33
LDB1-204ENST00000490751 CATSPER1Q8NEC5 780 aa29.59■■■□□ 2.33
LDB1-204ENST00000490751 OR1F2PQ96R84 312 aa29.59■■■□□ 2.33
LDB1-204ENST00000490751 LRRC4CQ9HCJ2 640 aa29.59■■■□□ 2.33
LDB1-204ENST00000490751 CDC123O75794 336 aaPredicted RBP29.58■■■□□ 2.33
LDB1-204ENST00000490751 AGFG2O95081 481 aa29.58■■■□□ 2.33
LDB1-204ENST00000490751 CD1DP15813 335 aa29.58■■■□□ 2.33
LDB1-204ENST00000490751 IL10P22301 178 aa29.58■■■□□ 2.33
LDB1-204ENST00000490751 SPRP35270 261 aaPredicted RBP29.58■■■□□ 2.33
LDB1-204ENST00000490751 OLR1P78380 273 aa29.58■■■□□ 2.33
LDB1-204ENST00000490751 ARG2P78540 354 aa29.58■■■□□ 2.33
LDB1-204ENST00000490751 SLC7A5Q01650 507 aa29.58■■■□□ 2.33
LDB1-204ENST00000490751 CDC16Q13042 620 aa29.58■■■□□ 2.33
LDB1-204ENST00000490751 GRTP1Q5TC63 336 aa29.58■■■□□ 2.33
LDB1-204ENST00000490751 B3GNTL1Q67FW5 361 aaPredicted RBP29.58■■■□□ 2.33
LDB1-204ENST00000490751 ABHD13Q7L211 337 aa29.58■■■□□ 2.33
LDB1-204ENST00000490751 ANKRD37Q7Z713 158 aa29.58■■■□□ 2.33
LDB1-204ENST00000490751 TRPV3Q8NET8 790 aa29.58■■■□□ 2.33
LDB1-204ENST00000490751 UTP15Q8TED0 518 aaKnown RBP29.58■■■□□ 2.33
LDB1-204ENST00000490751 C16orf45Q96MC5 204 aaPredicted RBP29.58■■■□□ 2.33
LDB1-204ENST00000490751 SCN2AQ99250 2005 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms