RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 MAN2A2P49641 1150 aa12.72□□□□□ -0.37
EXOSC3-207ENST00000490516 MPP1Q00013 466 aa12.72□□□□□ -0.37
EXOSC3-207ENST00000490516 TSTA3Q13630 321 aaPredicted RBP12.72□□□□□ -0.37
EXOSC3-207ENST00000490516 CCDC38Q502W7 563 aa12.72□□□□□ -0.37
EXOSC3-207ENST00000490516 C10orf62Q5T681 223 aaPredicted RBP12.72□□□□□ -0.37
EXOSC3-207ENST00000490516 TMEM251Q8N6I4 163 aa12.72□□□□□ -0.37
EXOSC3-207ENST00000490516 MCOLN3Q8TDD5 553 aa12.72□□□□□ -0.37
EXOSC3-207ENST00000490516 CAPZA3Q96KX2 299 aa12.72□□□□□ -0.37
EXOSC3-207ENST00000490516 HSD3B7Q9H2F3 369 aa12.72□□□□□ -0.37
EXOSC3-207ENST00000490516 R3HDM2Q9Y2K5 976 aaKnown RBP12.72□□□□□ -0.37
EXOSC3-207ENST00000490516 CR1P17927 2039 aa12.72□□□□□ -0.37
EXOSC3-207ENST00000490516 ATP6AP2A0A1C7CYW4 349 aa12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 KDM4EB2RXH2 506 aaPredicted RBP12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 CES2O00748 559 aa12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 ITGA10O75578 1167 aa12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 ATP6AP2O75787 350 aa12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 GLSO94925 669 aaPredicted RBP12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 TNNT1P13805 278 aa12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 GABRA1P14867 456 aa12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 AOAHP28039 575 aa12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 RBL1P28749 1068 aa12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 RPA3P35244 121 aaPredicted RBP12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 CDKN2BP42772 138 aa12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 DMTNQ08495 405 aa12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 KRTAP24-1Q3LI83 254 aa12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 HEPHL1Q6MZM0 1159 aa12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 ALKBH5Q6P6C2 394 aaKnown RBP12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 RGS9BPQ6ZS82 235 aa12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 ADCK2Q7Z695 626 aa12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 PDSS2Q86YH6 399 aa12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 CCDC50Q8IVM0 306 aa12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 NFAM1Q8NET5 270 aaPredicted RBP12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 ZCCHC10Q8TBK6 192 aa12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 SKA2Q8WVK7 121 aaPredicted RBP12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 P3H4Q92791 437 aa12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 SARAFQ96BY9 339 aa12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 LDAHQ9H6V9 325 aa12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 ARNT2Q9HBZ2 717 aa12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 SPATA7Q9P0W8 599 aa12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 UVRAGQ9P2Y5 699 aa12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 SPRR3Q9UBC9 169 aa12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 TAC3Q9UHF0 121 aa12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 ERVK-11Q9UQG0 969 aa12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 AAR2Q9Y312 384 aaKnown RBP12.71□□□□□ -0.37
EXOSC3-207ENST00000490516 FREM3P0C091 2139 aa12.71□□□□□ -0.38
EXOSC3-207ENST00000490516 ABCA1O95477 2261 aa12.71□□□□□ -0.38
EXOSC3-207ENST00000490516 TRBV11-1A0A0K0K1C0 115 aa12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 CCDC162PA2VCL2 907 aa12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 ZNF860A6NHJ4 632 aa12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 SAGE2PA6NJ88 616 aa12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 A8MUA0 341 aa12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 SUSD5O60279 629 aa12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 ENDOUP21128 410 aaKnown RBP12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 SORDQ00796 357 aa12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 RUNX1T1Q06455 604 aa12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 POU6F1Q14863 301 aa12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 ODF2Q5BJF6 829 aa12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 ICE2Q659A1 982 aa12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 ITPRIPL1Q6GPH6 555 aa12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 VN1R4Q7Z5H5 301 aa12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 HIPK1Q86Z02 1210 aa12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 FAM109AQ8N4B1 249 aa12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 MAPK1IP1LQ8NDC0 245 aa12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 OR5T3Q8NGG3 340 aa12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 PPP1R14CQ8TAE6 165 aa12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 STYXQ8WUJ0 223 aa12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 CCL19Q99731 98 aa12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 CARD6Q9BX69 1037 aa12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 PACSIN1Q9BY11 444 aa12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 NUP62CLQ9H1M0 184 aa12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 EXO5Q9H790 373 aa12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 PIH1D1Q9NWS0 290 aaKnown RBP12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 TSR3Q9UJK0 312 aaKnown RBP12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 PCDHA3Q9Y5H8 950 aa12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 NPFFR2Q9Y5X5 522 aa12.7□□□□□ -0.38
EXOSC3-207ENST00000490516 RAI1Q7Z5J4 1906 aaPredicted RBP12.69□□□□□ -0.38
EXOSC3-207ENST00000490516 CEACAM8P31997 349 aaPredicted RBP12.69□□□□□ -0.38
EXOSC3-207ENST00000490516 AGFG1P52594 562 aaKnown RBP12.69□□□□□ -0.38
EXOSC3-207ENST00000490516 MYL5Q02045 173 aa12.69□□□□□ -0.38
EXOSC3-207ENST00000490516 PRDX1Q06830 199 aaKnown RBP12.69□□□□□ -0.38
EXOSC3-207ENST00000490516 HYAL2Q12891 473 aa12.69□□□□□ -0.38
EXOSC3-207ENST00000490516 TFDP2Q14188 446 aa12.69□□□□□ -0.38
EXOSC3-207ENST00000490516 PRPSAP1Q14558 356 aa12.69□□□□□ -0.38
EXOSC3-207ENST00000490516 TMED2Q15363 201 aa12.69□□□□□ -0.38
EXOSC3-207ENST00000490516 NDUFAF5Q5TEU4 345 aa12.69□□□□□ -0.38
EXOSC3-207ENST00000490516 KIAA0930Q6ICG6 404 aaPredicted RBP12.69□□□□□ -0.38
EXOSC3-207ENST00000490516 TMEM214Q6NUQ4 689 aaKnown RBP12.69□□□□□ -0.38
EXOSC3-207ENST00000490516 KIAA0408Q6ZU52 694 aa12.69□□□□□ -0.38
EXOSC3-207ENST00000490516 SMPDL3AQ92484 453 aa12.69□□□□□ -0.38
EXOSC3-207ENST00000490516 SMPDL3BQ92485 455 aa12.69□□□□□ -0.38
EXOSC3-207ENST00000490516 SYN2Q92777 582 aaPredicted RBP12.69□□□□□ -0.38
EXOSC3-207ENST00000490516 TSSK1BQ9BXA7 367 aa12.69□□□□□ -0.38
EXOSC3-207ENST00000490516 EPB41L4BQ9H329 900 aa12.69□□□□□ -0.38
EXOSC3-207ENST00000490516 ANKHQ9HCJ1 492 aa12.69□□□□□ -0.38
EXOSC3-207ENST00000490516 ABCF3Q9NUQ8 709 aa12.69□□□□□ -0.38
EXOSC3-207ENST00000490516 UTP6Q9NYH9 597 aaKnown RBP12.69□□□□□ -0.38
EXOSC3-207ENST00000490516 ZNF629Q9UEG4 869 aaPredicted RBP12.69□□□□□ -0.38
EXOSC3-207ENST00000490516 FBXW2Q9UKT8 454 aa12.69□□□□□ -0.38
EXOSC3-207ENST00000490516 A8MVJ9 347 aa12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 HACD1B0YJ81 288 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms